RLG00000014339
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0003935
Physical Location & Seq
Forward (+)
51713925 .. 51714787
863 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014339

Sequence Viewer

Length: 510 bp
ATGGATAAGAGCTTTGTTGATGATGTTGTTCTTGTTGGTGGATCTACTAGAATTCCAAAGGTACAAGAAGTAATACAGGACTTCTTTAACGGTAAGGAGCTTTGTAAGAGCATCAATCCTGATGAAGCAGTTGCATATGGCGCGGCCATACAAGCTACAATTTTGAGCGGTTCCATTGAGAAGGTTCAAGACTTGCTCTTATTGGATGTCACTCCGCTTTCCCTTGGTTATGAGCGTGATGTAGGAGATATGGATGAGGAATTCAAAAATAAAGCGGAGGCTAAAATTGCATTGGAAAACTATGCAAATGACATGAGGAACACAGTTTCTCATCTCCCAAATCTCAAGCTCGCGGACAAGAAGAAAATTGGGAATGCGATTAAACAGGCAAAACGGTGGCTCAATGAAAACCAACTTGCTGAGTGTGATGAATTTGAGGATCAGATGAAACTGCTTGAGAACATTTGCAAGCCCATTATTGCCAAAGCCAGGGGTGATGGCAGTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

170

Amino Acids

18.71

Weight (kDa)

4.85

Isoelectric Point (pI)

23.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 2 - 85 2.7e-32 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 168
AccII CGCG 2 cut(s) 143, 353
AciI CCGC 5 cut(s) 143, 168, 215, 275, 353
AclWI GGATC 2 cut(s) 49, 447
AcoI YGGCCR 1 cut(s) 144
AcsI RAATTY 3 cut(s) 51, 260, 431
AfaI GTAC 1 cut(s) 63
AfiI CCNNNNNNNGG 1 cut(s) 489
AgsI TTSAA 2 cut(s) 188, 265
AjnI CCWGG 1 cut(s) 488
AluBI AGCT 4 cut(s) 12, 100, 155, 349
AluI AGCT 4 cut(s) 12, 100, 155, 349
AlwI GGATC 2 cut(s) 49, 447
AoxI GGCC 1 cut(s) 144
ApoI RAATTY 3 cut(s) 51, 260, 431
AspLEI GCGC 1 cut(s) 143
AsuHPI GGTGA 1 cut(s) 506
BccI CCATC 1 cut(s) 491
BciT130I CCWGG 1 cut(s) 490
BfaI CTAG 1 cut(s) 48
BisI GCNGC 1 cut(s) 144
BlsI GCNGC 1 cut(s) 145
Bme1390I CCNGG 1 cut(s) 490
BmiI GGNNCC 1 cut(s) 172
BmrFI CCNGG 1 cut(s) 490
BmsI GCATC 1 cut(s) 120
BpuEI CTTGAG 2 cut(s) 329, 476
BsaJI CCNNGG 2 cut(s) 223, 489
Bsc4I CCNNNNNNNGG 1 cut(s) 489
BseBI CCWGG 1 cut(s) 490
BseDI CCNNGG 2 cut(s) 223, 489
BseGI GGATG 2 cut(s) 211, 259
BseLI CCNNNNNNNGG 1 cut(s) 489
BseMII CTCAG 1 cut(s) 411
Bsh1236I CGCG 2 cut(s) 143, 353
BshFI GGCC 1 cut(s) 146
BslI CCNNNNNNNGG 1 cut(s) 489
BsmI GAATGC 1 cut(s) 379
BsnI GGCC 1 cut(s) 146
Bsp143I GATC 2 cut(s) 41, 439
BspACI CCGC 5 cut(s) 143, 168, 215, 275, 353
BspANI GGCC 1 cut(s) 146
BspCNI CTCAG 1 cut(s) 412
BspFNI CGCG 2 cut(s) 143, 353
BspLI GGNNCC 1 cut(s) 172
BspPI GGATC 2 cut(s) 49, 447
BsrBI CCGCTC 1 cut(s) 168
BssECI CCNNGG 2 cut(s) 223, 489
BssMI GATC 2 cut(s) 41, 439
BssT1I CCWWGG 1 cut(s) 223
Bst2UI CCWGG 1 cut(s) 490
Bst4CI ACNGT 3 cut(s) 92, 325, 396
BstC8I GCNNGC 2 cut(s) 351, 470
BstDEI CTNAG 1 cut(s) 420
BstF5I GGATG 2 cut(s) 211, 259
BstFNI CGCG 2 cut(s) 143, 353
BstHHI GCGC 1 cut(s) 143
BstKTI GATC 2 cut(s) 44, 442
BstMBI GATC 2 cut(s) 41, 439
BstMWI GCNNNNNNNGC 3 cut(s) 140, 152, 287
BstNI CCWGG 1 cut(s) 490
BstSCI CCNGG 1 cut(s) 488
BstUI CGCG 2 cut(s) 143, 353
BstX2I RGATCY 1 cut(s) 41
BstYI RGATCY 1 cut(s) 41
BsuRI GGCC 1 cut(s) 146
BtsCI GGATG 2 cut(s) 211, 259
BtsI GCAGTG 1 cut(s) 508
BtsIMutI CAGTG 1 cut(s) 508
Cac8I GCNNGC 2 cut(s) 351, 470
CfoI GCGC 1 cut(s) 143
Csp6I GTAC 1 cut(s) 62
CviAII CATG 1 cut(s) 313
CviJI RGCY 9 cut(s) 12, 100, 146, 155, 281, 349, 400, 472, 488
CviKI_1 RGCY 9 cut(s) 12, 100, 146, 155, 281, 349, 400, 472, 488
CviQI GTAC 1 cut(s) 62
DdeI CTNAG 1 cut(s) 420
DpnI GATC 2 cut(s) 43, 441
DpnII GATC 2 cut(s) 41, 439
EaeI YGGCCR 1 cut(s) 144
Eco130I CCWWGG 1 cut(s) 223
EcoRI GAATTC 2 cut(s) 51, 260
EcoRII CCWGG 1 cut(s) 488
EcoT14I CCWWGG 1 cut(s) 223
ErhI CCWWGG 1 cut(s) 223
FaeI CATG 1 cut(s) 316
FaiI YATR 7 cut(s) 136, 138, 149, 231, 251, 303, 314
FatI CATG 1 cut(s) 312
FauNDI CATATG 1 cut(s) 136
Fnu4HI GCNGC 1 cut(s) 144
FokI GGATG 2 cut(s) 218, 266
Fsp4HI GCNGC 1 cut(s) 144
FspBI CTAG 1 cut(s) 48
GlaI GCGC 1 cut(s) 142
GluI GCNGC 1 cut(s) 144
HaeIII GGCC 1 cut(s) 146
HhaI GCGC 1 cut(s) 143
Hin1II CATG 1 cut(s) 316
Hin6I GCGC 1 cut(s) 141
HinP1I GCGC 1 cut(s) 141
HphI GGTGA 1 cut(s) 506
Hpy188I TCNGA 1 cut(s) 444
Hpy188III TCNNGA 2 cut(s) 119, 188
HpyAV CCTTC 1 cut(s) 175
HpyCH4III ACNGT 3 cut(s) 92, 325, 396
HpyCH4V TGCA 4 cut(s) 134, 290, 305, 468
HpyF10VI GCNNNNNNNGC 3 cut(s) 140, 152, 287
HpyF3I CTNAG 1 cut(s) 420
Hsp92II CATG 1 cut(s) 316
HspAI GCGC 1 cut(s) 141
Kzo9I GATC 2 cut(s) 41, 439
LmnI GCTCC 1 cut(s) 97
LpnPI CCDG 5 cut(s) 62, 132, 371, 475, 502
LweI GCATC 1 cut(s) 120
MaeI CTAG 1 cut(s) 48
MaeIII GTNAC 1 cut(s) 208
MalI GATC 2 cut(s) 43, 441
MbiI CCGCTC 1 cut(s) 168
MboI GATC 2 cut(s) 41, 439
MboII GAAGA 1 cut(s) 373
MflI RGATCY 1 cut(s) 41
MluCI AATT 6 cut(s) 51, 159, 260, 285, 366, 431
MnlI CCTC 4 cut(s) 250, 271, 309, 430
MseI TTAA 2 cut(s) 87, 381
MspR9I CCNGG 1 cut(s) 490
Mva1269I GAATGC 1 cut(s) 379
MvaI CCWGG 1 cut(s) 490
MvnI CGCG 2 cut(s) 143, 353
MwoI GCNNNNNNNGC 3 cut(s) 140, 152, 287
NdeI CATATG 1 cut(s) 136
NdeII GATC 2 cut(s) 41, 439
NlaIII CATG 1 cut(s) 316
NlaIV GGNNCC 1 cut(s) 172
NmuCI GTSAC 1 cut(s) 208
PctI GAATGC 1 cut(s) 379
PkrI GCNGC 1 cut(s) 145
Psp6I CCWGG 1 cut(s) 488
PspGI CCWGG 1 cut(s) 488
PspN4I GGNNCC 1 cut(s) 172
PsuI RGATCY 1 cut(s) 41
RsaI GTAC 1 cut(s) 63
RsaNI GTAC 1 cut(s) 62
SaqAI TTAA 2 cut(s) 87, 381
SatI GCNGC 1 cut(s) 144
Sau3AI GATC 2 cut(s) 41, 439
ScrFI CCNGG 1 cut(s) 490
SetI ASST 6 cut(s) 14, 63, 102, 157, 186, 351
SfaNI GCATC 1 cut(s) 120
SmlI CTYRAG 2 cut(s) 344, 455
SmoI CTYRAG 2 cut(s) 344, 455
Sse9I AATT 6 cut(s) 51, 159, 260, 285, 366, 431
SsiI CCGC 5 cut(s) 143, 168, 215, 275, 353
SspMI CTAG 1 cut(s) 48
StyD4I CCNGG 1 cut(s) 488
StyI CCWWGG 1 cut(s) 223
TaaI ACNGT 3 cut(s) 92, 325, 396
TasI AATT 6 cut(s) 51, 159, 260, 285, 366, 431
TauI GCSGC 1 cut(s) 146
Tru1I TTAA 2 cut(s) 87, 381
Tru9I TTAA 2 cut(s) 87, 381
TscAI CASTG 1 cut(s) 508
TseFI GTSAC 1 cut(s) 208
Tsp45I GTSAC 1 cut(s) 208
TspDTI ATGAA 4 cut(s) 138, 420, 444, 461
TspRI CASTG 1 cut(s) 508
XapI RAATTY 3 cut(s) 51, 260, 431
XspI CTAG 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.