Rorug07G0060800
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0003935
Physical Location & Seq
Reverse (-)
4414799 .. 4415687
889 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0060800.1

Sequence Viewer

Length: 819 bp
ATGGATGAGGATGTGGATGCTGATTCTGCACTGTCTGAAGAGACTATCCAGAAAGTGCTGGCTGGAGATGAAGTTAGTTTTGATGATCCATCTGCAGAAGAAAAGAAACTATTCCAAAGAGCTGTTGCTTCTGGAGAACTGAGCAAGACGATTAAGCCTTGGGATCCTTGGTGGTTGAAGCCGTCTGCCAGGACAATATCGTTCAGCAAAGAAGGAACCCAACTAATCCAACCGCTTGCCAAAGAGGACGAACCAATGTCACCAGAAGATGATCAAGAAAGCAGTCAAGCAAGTGAGATTCCACCAGGTCCTGAGACACCACTGCCTCCCCTCAGCAAGCATAGTTCCGCGAAGCCATCACCATTCTTAGCTGTTCATCTGGTCGACATTATATACAGCTACTGCTTCGCTCTTCGTCTCTACAATGGTGATTGGCAATCAGATGCCACAGGCTCAGCTATGGTCGTGCTCTCCGTGTCATCGGTATTGGGTCAAGGAGGGCAGCCGGAGACTGTCCTGGAAGCTCTATCTTATTGCTTGGAGCAGACCTGCTCTCCAGCTTTCAGACAGATGGGTGGCTTGCAGTTTGGACTAGAGGATGGTCCAGACCGGGGAGACCAAAGAAACCACGAGTCAATCAAAGAGCTGAAATCAGAGAATCCACGAAAATCAAGAAGAGCTGAAATTAGGAGTAAGCTGAAGCAGGCCGAAAGGAAAATCTACTTCTTCATGTGTTGGGTCCACGAGCAACCTGGGGAAGCTTGGTCTTCCTTAGGAGCCATCGTAAGGGCAGAGAAAAGTTCAGCTATGAACTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

272

Amino Acids

30.17

Weight (kDa)

4.82

Isoelectric Point (pI)

47.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 557
AccI GTMKAC 1 cut(s) 384
AccII CGCG 1 cut(s) 350
AciI CCGC 2 cut(s) 233, 348
AclWI GGATC 3 cut(s) 80, 158, 171
AcuI CTGAAG 2 cut(s) 57, 719
AfiI CCNNNNNNNGG 2 cut(s) 611, 786
AgsI TTSAA 1 cut(s) 178
AjnI CCWGG 4 cut(s) 188, 304, 516, 751
Alw21I GWGCWC 1 cut(s) 471
Alw26I GTCTC 5 cut(s) 35, 308, 422, 503, 609
AlwI GGATC 3 cut(s) 80, 158, 171
AlwNI CAGNNNCTG 2 cut(s) 311, 402
AoxI GGCC 1 cut(s) 705
ApeKI GCWGC 1 cut(s) 502
Asp700I GAANNNNTTC 1 cut(s) 110
AspS9I GGNCC 3 cut(s) 308, 602, 739
AsuC2I CCSGG 1 cut(s) 611
AsuHPI GGTGA 3 cut(s) 252, 351, 440
AvaII GGWCC 3 cut(s) 308, 602, 739
AxyI CCTNAGG 1 cut(s) 772
BamHI GGATCC 1 cut(s) 163
BauI CACGAG 2 cut(s) 629, 743
BbsI GAAGAC 1 cut(s) 759
Bbv12I GWGCWC 1 cut(s) 471
BbvCI CCTCAGC 1 cut(s) 332
BbvI GCAGC 1 cut(s) 514
BccI CCATC 5 cut(s) 97, 364, 565, 593, 788
BceAI ACGGC 1 cut(s) 166
BciT130I CCWGG 4 cut(s) 190, 306, 518, 753
BclI TGATCA 1 cut(s) 271
BcnI CCSGG 1 cut(s) 611
BcoDI GTCTC 5 cut(s) 35, 308, 422, 503, 609
BfaI CTAG 1 cut(s) 593
BfmI CTRYAG 1 cut(s) 93
BfuAI ACCTGC 1 cut(s) 557
BisI GCNGC 1 cut(s) 503
BlpI GCTNAGC 1 cut(s) 454
BlsI GCNGC 1 cut(s) 504
Bme1390I CCNGG 5 cut(s) 190, 306, 518, 611, 753
Bme18I GGWCC 3 cut(s) 308, 602, 739
BmgT120I GGNCC 3 cut(s) 308, 602, 739
BmiI GGNNCC 4 cut(s) 165, 217, 740, 778
BmrFI CCNGG 5 cut(s) 190, 306, 518, 611, 753
BmsI GCATC 2 cut(s) 7, 433
BpiI GAAGAC 1 cut(s) 759
BpmI CTGGAG 3 cut(s) 84, 153, 540
Bpu10I CCTNAGC 1 cut(s) 332
Bpu1102I GCTNAGC 1 cut(s) 454
BpuMI CCSGG 1 cut(s) 611
BsaI GGTCTC 1 cut(s) 609
BsaJI CCNNGG 4 cut(s) 158, 167, 610, 752
BsaXI ACNNNNNCTCC 6 cut(s) 57, 87, 538, 568, 768, 798
Bsc4I CCNNNNNNNGG 2 cut(s) 611, 786
Bse21I CCTNAGG 1 cut(s) 772
BseBI CCWGG 4 cut(s) 190, 306, 518, 753
BseDI CCNNGG 4 cut(s) 158, 167, 610, 752
BseGI GGATG 4 cut(s) 10, 16, 22, 604
BseLI CCNNNNNNNGG 2 cut(s) 611, 786
BseMII CTCAG 4 cut(s) 131, 303, 346, 468
BseXI GCAGC 1 cut(s) 514
BsgI GTGCAG 1 cut(s) 12
Bsh1236I CGCG 1 cut(s) 350
BshFI GGCC 1 cut(s) 707
BsiHKAI GWGCWC 1 cut(s) 471
BsiSI CCGG 2 cut(s) 506, 610
BslI CCNNNNNNNGG 2 cut(s) 611, 786
BsmAI GTCTC 5 cut(s) 35, 308, 422, 503, 609
BsmBI CGTCTC 1 cut(s) 422
BsnI GGCC 1 cut(s) 707
Bso31I GGTCTC 1 cut(s) 609
Bsp1286I GDGCHC 1 cut(s) 471
Bsp143I GATC 3 cut(s) 85, 163, 271
Bsp1720I GCTNAGC 1 cut(s) 454
BspACI CCGC 2 cut(s) 233, 348
BspANI GGCC 1 cut(s) 707
BspCNI CTCAG 4 cut(s) 132, 304, 345, 467
BspFNI CGCG 1 cut(s) 350
BspLI GGNNCC 4 cut(s) 165, 217, 740, 778
BspMAI CTGCAG 1 cut(s) 97
BspMI ACCTGC 1 cut(s) 557
BspPI GGATC 3 cut(s) 80, 158, 171
BspQI GCTCTTC 2 cut(s) 417, 670
BspTNI GGTCTC 1 cut(s) 609
BssECI CCNNGG 4 cut(s) 158, 167, 610, 752
BssMI GATC 3 cut(s) 85, 163, 271
BssSI CACGAG 2 cut(s) 629, 743
BssT1I CCWWGG 2 cut(s) 158, 167
Bst2BI CACGAG 2 cut(s) 629, 743
Bst2UI CCWGG 4 cut(s) 190, 306, 518, 753
Bst4CI ACNGT 2 cut(s) 33, 514
Bst6I CTCTTC 3 cut(s) 33, 417, 670
BstC8I GCNNGC 5 cut(s) 60, 237, 338, 581, 705
BstDEI CTNAG 6 cut(s) 140, 312, 332, 367, 454, 772
BstF5I GGATG 4 cut(s) 10, 16, 22, 604
BstFNI CGCG 1 cut(s) 350
BstKTI GATC 3 cut(s) 88, 166, 274
BstMAI GTCTC 5 cut(s) 35, 308, 422, 503, 609
BstMBI GATC 3 cut(s) 85, 163, 271
BstMWI GCNNNNNNNGC 1 cut(s) 26
BstNI CCWGG 4 cut(s) 190, 306, 518, 753
BstSCI CCNGG 5 cut(s) 188, 304, 516, 609, 751
BstSFI CTRYAG 1 cut(s) 93
BstUI CGCG 1 cut(s) 350
BstV1I GCAGC 1 cut(s) 514
BstV2I GAAGAC 1 cut(s) 759
BstX2I RGATCY 1 cut(s) 163
BstYI RGATCY 1 cut(s) 163
Bsu36I CCTNAGG 1 cut(s) 772
BsuRI GGCC 1 cut(s) 707
BtsCI GGATG 4 cut(s) 10, 16, 22, 604
BtsI GCAGTG 1 cut(s) 320
BtsIMutI CAGTG 2 cut(s) 29, 320
BveI ACCTGC 1 cut(s) 557
Cac8I GCNNGC 5 cut(s) 60, 237, 338, 581, 705
CaiI CAGNNNCTG 2 cut(s) 311, 402
Cfr13I GGNCC 3 cut(s) 308, 602, 739
CsiI ACCWGGT 1 cut(s) 304
CviAII CATG 1 cut(s) 730
DdeI CTNAG 6 cut(s) 140, 312, 332, 367, 454, 772
DpnI GATC 3 cut(s) 87, 165, 273
DpnII GATC 3 cut(s) 85, 163, 271
Eam1104I CTCTTC 3 cut(s) 33, 417, 670
EarI CTCTTC 3 cut(s) 33, 417, 670
Eco130I CCWWGG 2 cut(s) 158, 167
Eco31I GGTCTC 1 cut(s) 609
Eco47I GGWCC 3 cut(s) 308, 602, 739
Eco57I CTGAAG 2 cut(s) 57, 719
Eco81I CCTNAGG 1 cut(s) 772
EcoO109I RGGNCCY 1 cut(s) 308
EcoRII CCWGG 4 cut(s) 188, 304, 516, 751
EcoT14I CCWWGG 2 cut(s) 158, 167
ErhI CCWWGG 2 cut(s) 158, 167
Esp3I CGTCTC 1 cut(s) 422
FaeI CATG 1 cut(s) 733
FaiI YATR 6 cut(s) 342, 392, 394, 461, 731, 809
FatI CATG 1 cut(s) 729
FbaI TGATCA 1 cut(s) 271
FblI GTMKAC 1 cut(s) 384
Fnu4HI GCNGC 1 cut(s) 503
FokI GGATG 4 cut(s) 17, 23, 29, 611
Fsp4HI GCNGC 1 cut(s) 503
FspBI CTAG 1 cut(s) 593
GluI GCNGC 1 cut(s) 503
GsuI CTGGAG 3 cut(s) 84, 153, 540
HaeIII GGCC 1 cut(s) 707
HapII CCGG 2 cut(s) 506, 610
Hin1II CATG 1 cut(s) 733
HincII GTYRAC 1 cut(s) 385
HindII GTYRAC 1 cut(s) 385
HindIII AAGCTT 1 cut(s) 759
HinfI GANTC 4 cut(s) 23, 298, 632, 658
HpaII CCGG 2 cut(s) 506, 610
HphI GGTGA 3 cut(s) 252, 351, 440
Hpy166II GTNNAC 2 cut(s) 385, 742
Hpy188I TCNGA 4 cut(s) 37, 442, 566, 655
Hpy188III TCNNGA 6 cut(s) 49, 132, 275, 311, 605, 672
Hpy8I GTNNAC 2 cut(s) 385, 742
HpyAV CCTTC 1 cut(s) 206
HpyCH4III ACNGT 2 cut(s) 33, 514
HpyCH4V TGCA 3 cut(s) 29, 95, 583
HpyF10VI GCNNNNNNNGC 1 cut(s) 26
HpyF3I CTNAG 6 cut(s) 140, 312, 332, 367, 454, 772
Hsp92II CATG 1 cut(s) 733
Ksp22I TGATCA 1 cut(s) 271
Kzo9I GATC 3 cut(s) 85, 163, 271
LguI GCTCTTC 2 cut(s) 417, 670
LmnI GCTCC 2 cut(s) 541, 776
Lsp1109I GCAGC 1 cut(s) 514
LweI GCATC 2 cut(s) 7, 433
MabI ACCWGGT 1 cut(s) 304
MaeI CTAG 1 cut(s) 593
MaeIII GTNAC 1 cut(s) 258
MalI GATC 3 cut(s) 87, 165, 273
MboI GATC 3 cut(s) 85, 163, 271
MboII GAAGA 7 cut(s) 50, 110, 278, 404, 687, 718, 759
MflI RGATCY 1 cut(s) 163
MhlI GDGCHC 1 cut(s) 471
MluCI AATT 1 cut(s) 684
MlyI GAGTC 1 cut(s) 641
MmeI TCCRAC 1 cut(s) 253
MnlI CCTC 5 cut(s) 238, 336, 341, 491, 589
MroXI GAANNNNTTC 1 cut(s) 110
MseI TTAA 2 cut(s) 153, 817
MspI CCGG 2 cut(s) 506, 610
MspR9I CCNGG 5 cut(s) 190, 306, 518, 611, 753
MvaI CCWGG 4 cut(s) 190, 306, 518, 753
MvnI CGCG 1 cut(s) 350
MwoI GCNNNNNNNGC 1 cut(s) 26
NciI CCSGG 1 cut(s) 611
NdeII GATC 3 cut(s) 85, 163, 271
NlaIII CATG 1 cut(s) 733
NlaIV GGNNCC 4 cut(s) 165, 217, 740, 778
NmuCI GTSAC 1 cut(s) 258
PciSI GCTCTTC 2 cut(s) 417, 670
PcsI WCGNNNNNNNCGW 1 cut(s) 471
PdmI GAANNNNTTC 1 cut(s) 110
PfeI GAWTC 3 cut(s) 23, 298, 658
PfoI TCCNGGA 1 cut(s) 516
PkrI GCNGC 1 cut(s) 504
PleI GAGTC 1 cut(s) 640
PpsI GAGTC 1 cut(s) 640
PpuMI RGGWCCY 1 cut(s) 308
Psp5II RGGWCCY 1 cut(s) 308
Psp6I CCWGG 4 cut(s) 188, 304, 516, 751
PspGI CCWGG 4 cut(s) 188, 304, 516, 751
PspN4I GGNNCC 4 cut(s) 165, 217, 740, 778
PspPI GGNCC 3 cut(s) 308, 602, 739
PspPPI RGGWCCY 1 cut(s) 308
PstI CTGCAG 1 cut(s) 97
PstNI CAGNNNCTG 2 cut(s) 311, 402
PsuI RGATCY 1 cut(s) 163
SalI GTCGAC 1 cut(s) 383
SapI GCTCTTC 2 cut(s) 417, 670
SaqAI TTAA 2 cut(s) 153, 817
SatI GCNGC 1 cut(s) 503
Sau3AI GATC 3 cut(s) 85, 163, 271
Sau96I GGNCC 3 cut(s) 308, 602, 739
SchI GAGTC 1 cut(s) 641
ScrFI CCNGG 5 cut(s) 190, 306, 518, 611, 753
SduI GDGCHC 1 cut(s) 471
SexAI ACCWGGT 1 cut(s) 304
SfaNI GCATC 2 cut(s) 7, 433
SfcI CTRYAG 1 cut(s) 93
SinI GGWCC 3 cut(s) 308, 602, 739
Sse9I AATT 1 cut(s) 684
SsiI CCGC 2 cut(s) 233, 348
SspMI CTAG 1 cut(s) 593
StyD4I CCNGG 5 cut(s) 188, 304, 516, 609, 751
StyI CCWWGG 2 cut(s) 158, 167
TaaI ACNGT 2 cut(s) 33, 514
TaqI TCGA 1 cut(s) 384
TasI AATT 1 cut(s) 684
TfiI GAWTC 3 cut(s) 23, 298, 658
Tru1I TTAA 2 cut(s) 153, 817
Tru9I TTAA 2 cut(s) 153, 817
TscAI CASTG 2 cut(s) 36, 327
TseFI GTSAC 1 cut(s) 258
TseI GCWGC 1 cut(s) 502
Tsp45I GTSAC 1 cut(s) 258
TspDTI ATGAA 3 cut(s) 84, 365, 718
TspGWI ACGGA 1 cut(s) 463
TspRI CASTG 2 cut(s) 36, 327
VpaK11BI GGWCC 3 cut(s) 308, 602, 739
XcmI CCANNNNNNNNNTGG 1 cut(s) 749
XmiI GTMKAC 1 cut(s) 384
XmnI GAANNNNTTC 1 cut(s) 110
XspI CTAG 1 cut(s) 593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.