Rorug07G0063600
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0003935
Physical Location & Seq
Reverse (-)
4799564 .. 4802308
2745 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0063600.1

Sequence Viewer

Length: 840 bp
ATGTCCATACTTCTCCAACACTCAAAACAATTATTTGCTCTTCATACAAATCACATCCAATCAAAAATGAGCGTCGCTGCTTCTATATCCTCCATCGCCACCGTTCGTTTCCCCAATTGCCGCCGCCACTGCTTTCGCGCCTCACCATCTCTCTCGCTTCGGATAATGGCCCAATTCTCCTCCTCCGCCACGTCTACGCCGCCTTCCAGCTCCGAAGCGGCCGCCGTGGAACCCAAGAAACCGCCCAAGCTGCCGTGGCTCATTGTCGGACTCGGAAACCCCGGCAAGAAGTACAGCAGCACCCGCCACAATGTGGGTTTCGAGATGGTGGATGCTATAGCCGAAGCTGAAGGGATAGCTTTGAGCACTGTTTCTTTCAAAGCCCTTGTTGGGAAAGGATTTATTGGGGATGCCCCGGTTATATTTGCCAAACCGCAAACTTACATGAATAAAAGCGGTGAGTCTGTTGGAGCCATCGTCTCATATTACAAAATTCCATTGCAGCAAGTACTTGTGATCTTTGACGATCTGGATCTGCCATTCGCAAAATTGCGGCTGTTGCCAAAGGGTGGACATGGAGGACAAAATGGGATGAGAAGTATAATTGATCATTTTAAAGGAAGCCGTGACTTTCCACGTTTGAGAATCGGCATTGGGCGGCCTCCTGGGAAAATGGACCCTGCCAACTTTGTTCTTCGTCCCTTTACTAAACAAGAACGTGAAGAGTTAGATTTTACACTTCAACATGGCATAGATGCGGTGCGGATTCTCTTGCTTGAAGGGTTCAATAAAGCGGCAACGTTTGTTAACACAGCGAAACCCTTGGAGCAATGTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

279

Amino Acids

30.43

Weight (kDa)

9.83

Isoelectric Point (pI)

49.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pept_tRNA_hydro PF01195 87 - 268 1.2e-65 Peptidyl-tRNA hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 313, 569
AccI GTMKAC 1 cut(s) 194
AccII CGCG 1 cut(s) 138
AclI AACGTT 1 cut(s) 800
AclWI GGATC 1 cut(s) 540
AcoI YGGCCR 1 cut(s) 219
AcsI RAATTY 1 cut(s) 492
AcuI CTGAAG 1 cut(s) 369
AdeI CACNNNGTG 1 cut(s) 313
AfaI GTAC 2 cut(s) 293, 510
AfiI CCNNNNNNNGG 3 cut(s) 313, 390, 569
AgsI TTSAA 4 cut(s) 379, 743, 779, 787
AjiI CACGTC 1 cut(s) 192
AjnI CCWGG 1 cut(s) 664
AluBI AGCT 4 cut(s) 210, 250, 347, 359
AluI AGCT 4 cut(s) 210, 250, 347, 359
Alw21I GWGCWC 1 cut(s) 368
Alw26I GTCTC 1 cut(s) 484
AlwI GGATC 1 cut(s) 540
AoxI GGCC 3 cut(s) 168, 219, 659
ApeKI GCWGC 4 cut(s) 77, 250, 297, 502
ApoI RAATTY 1 cut(s) 492
AspLEI GCGC 1 cut(s) 140
AspS9I GGNCC 2 cut(s) 169, 676
AsuC2I CCSGG 2 cut(s) 282, 416
AsuHPI GGTGA 2 cut(s) 135, 470
AvaII GGWCC 1 cut(s) 676
Bbv12I GWGCWC 1 cut(s) 368
BbvI GCAGC 4 cut(s) 64, 237, 309, 514
BccI CCATC 4 cut(s) 101, 154, 319, 482
BceAI ACGGC 3 cut(s) 209, 238, 609
BciT130I CCWGG 1 cut(s) 666
BclI TGATCA 1 cut(s) 607
BcnI CCSGG 2 cut(s) 282, 416
BcoDI GTCTC 1 cut(s) 484
BfmI CTRYAG 1 cut(s) 336
BmcAI AGTACT 1 cut(s) 510
Bme1390I CCNGG 3 cut(s) 282, 416, 666
Bme18I GGWCC 1 cut(s) 676
BmgBI CACGTC 1 cut(s) 192
BmgT120I GGNCC 2 cut(s) 169, 676
BmiI GGNNCC 3 cut(s) 231, 472, 678
BmrFI CCNGG 3 cut(s) 282, 416, 666
BmsI GCATC 3 cut(s) 322, 400, 745
BpuMI CCSGG 2 cut(s) 282, 416
BsaBI GATNNNNATC 1 cut(s) 531
BsaJI CCNNGG 6 cut(s) 225, 254, 280, 414, 665, 822
BsaXI ACNNNNNCTCC 2 cut(s) 462, 492
Bsc4I CCNNNNNNNGG 3 cut(s) 313, 390, 569
Bse3DI GCAATG 2 cut(s) 497, 836
Bse8I GATNNNNATC 1 cut(s) 531
BseBI CCWGG 1 cut(s) 666
BseDI CCNNGG 6 cut(s) 225, 254, 280, 414, 665, 822
BseGI GGATG 4 cut(s) 54, 337, 415, 597
BseJI GATNNNNATC 1 cut(s) 531
BseLI CCNNNNNNNGG 3 cut(s) 313, 390, 569
BseMI GCAATG 2 cut(s) 497, 836
BseRI GAGGAG 2 cut(s) 169, 172
BseX3I CGGCCG 1 cut(s) 219
BseXI GCAGC 4 cut(s) 64, 237, 309, 514
Bsh1236I CGCG 1 cut(s) 138
Bsh1285I CGRYCG 1 cut(s) 222
BshFI GGCC 3 cut(s) 170, 221, 661
BsiEI CGRYCG 1 cut(s) 222
BsiHKAI GWGCWC 1 cut(s) 368
BsiSI CCGG 2 cut(s) 282, 416
BslFI GGGAC 1 cut(s) 684
BslI CCNNNNNNNGG 3 cut(s) 313, 390, 569
BsmAI GTCTC 1 cut(s) 484
BsmBI CGTCTC 1 cut(s) 484
BsmFI GGGAC 1 cut(s) 684
BsnI GGCC 3 cut(s) 170, 221, 661
Bsp1286I GDGCHC 1 cut(s) 368
Bsp143I GATC 4 cut(s) 516, 526, 532, 607
BspANI GGCC 3 cut(s) 170, 221, 661
BspFNI CGCG 1 cut(s) 138
BspLI GGNNCC 3 cut(s) 231, 472, 678
BspPI GGATC 1 cut(s) 540
BspQI GCTCTTC 1 cut(s) 45
BsrDI GCAATG 2 cut(s) 497, 836
BssECI CCNNGG 6 cut(s) 225, 254, 280, 414, 665, 822
BssMI GATC 4 cut(s) 516, 526, 532, 607
BssT1I CCWWGG 1 cut(s) 822
Bst2UI CCWGG 1 cut(s) 666
Bst4CI ACNGT 2 cut(s) 103, 370
Bst6I CTCTTC 2 cut(s) 45, 717
BstDSI CCRYGG 2 cut(s) 225, 254
BstF5I GGATG 4 cut(s) 54, 337, 415, 597
BstFNI CGCG 1 cut(s) 138
BstHHI GCGC 1 cut(s) 140
BstKTI GATC 4 cut(s) 519, 529, 535, 610
BstMAI GTCTC 1 cut(s) 484
BstMBI GATC 4 cut(s) 516, 526, 532, 607
BstMCI CGRYCG 1 cut(s) 222
BstMWI GCNNNNNNNGC 5 cut(s) 129, 250, 256, 303, 559
BstNI CCWGG 1 cut(s) 666
BstSCI CCNGG 3 cut(s) 280, 414, 664
BstSFI CTRYAG 1 cut(s) 336
BstUI CGCG 1 cut(s) 138
BstV1I GCAGC 4 cut(s) 64, 237, 309, 514
BstX2I RGATCY 1 cut(s) 532
BstYI RGATCY 1 cut(s) 532
BstZI CGGCCG 1 cut(s) 219
BsuRI GGCC 3 cut(s) 170, 221, 661
BtgI CCRYGG 2 cut(s) 225, 254
BtgZI GCGATG 1 cut(s) 79
BtrI CACGTC 1 cut(s) 192
BtsCI GGATG 4 cut(s) 54, 337, 415, 597
BtsI GCAGTG 1 cut(s) 127
BtsIMutI CAGTG 2 cut(s) 127, 366
CciNI GCGGCCGC 1 cut(s) 219
CfoI GCGC 1 cut(s) 140
Cfr13I GGNCC 2 cut(s) 169, 676
CseI GACGC 1 cut(s) 61
Csp6I GTAC 2 cut(s) 292, 509
CviAII CATG 3 cut(s) 445, 575, 746
CviQI GTAC 2 cut(s) 292, 509
DpnI GATC 4 cut(s) 518, 528, 534, 609
DpnII GATC 4 cut(s) 516, 526, 532, 607
DraI TTTAAA 1 cut(s) 616
DraIII CACNNNGTG 1 cut(s) 313
EaeI YGGCCR 1 cut(s) 219
EagI CGGCCG 1 cut(s) 219
Eam1104I CTCTTC 2 cut(s) 45, 717
EarI CTCTTC 2 cut(s) 45, 717
EciI GGCGGA 1 cut(s) 175
EclXI CGGCCG 1 cut(s) 219
Eco130I CCWWGG 1 cut(s) 822
Eco47I GGWCC 1 cut(s) 676
Eco52I CGGCCG 1 cut(s) 219
Eco57I CTGAAG 1 cut(s) 369
EcoRII CCWGG 1 cut(s) 664
EcoT14I CCWWGG 1 cut(s) 822
ErhI CCWWGG 1 cut(s) 822
Esp3I CGTCTC 1 cut(s) 484
FaeI CATG 3 cut(s) 448, 578, 749
FaqI GGGAC 1 cut(s) 684
FatI CATG 3 cut(s) 444, 574, 745
FauI CCCGC 1 cut(s) 311
FbaI TGATCA 1 cut(s) 607
FblI GTMKAC 1 cut(s) 194
FokI GGATG 4 cut(s) 41, 344, 422, 604
GlaI GCGC 1 cut(s) 139
HaeIII GGCC 3 cut(s) 170, 221, 661
HapII CCGG 2 cut(s) 282, 416
HgaI GACGC 1 cut(s) 61
HhaI GCGC 1 cut(s) 140
Hin1II CATG 3 cut(s) 448, 578, 749
Hin6I GCGC 1 cut(s) 138
HinP1I GCGC 1 cut(s) 138
HincII GTYRAC 1 cut(s) 808
HindII GTYRAC 1 cut(s) 808
HinfI GANTC 4 cut(s) 270, 461, 645, 766
HpaI GTTAAC 1 cut(s) 808
HpaII CCGG 2 cut(s) 282, 416
HphI GGTGA 2 cut(s) 135, 470
Hpy166II GTNNAC 3 cut(s) 195, 572, 808
Hpy188I TCNGA 4 cut(s) 162, 214, 269, 275
Hpy188III TCNNGA 2 cut(s) 322, 530
Hpy8I GTNNAC 3 cut(s) 195, 572, 808
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 3 cut(s) 213, 344, 773
HpyCH4III ACNGT 2 cut(s) 103, 370
HpyCH4IV ACGT 4 cut(s) 191, 637, 718, 800
HpyCH4V TGCA 1 cut(s) 502
HpyF10VI GCNNNNNNNGC 5 cut(s) 129, 250, 256, 303, 559
HpySE526I ACGT 4 cut(s) 191, 637, 718, 800
Hsp92II CATG 3 cut(s) 448, 578, 749
HspAI GCGC 1 cut(s) 138
Ksp22I TGATCA 1 cut(s) 607
KspAI GTTAAC 1 cut(s) 808
Kzo9I GATC 4 cut(s) 516, 526, 532, 607
LguI GCTCTTC 1 cut(s) 45
LmnI GCTCC 3 cut(s) 215, 470, 826
LpnPI CCDG 7 cut(s) 220, 295, 429, 515, 651, 678, 693
Lsp1109I GCAGC 4 cut(s) 64, 237, 309, 514
LweI GCATC 3 cut(s) 322, 400, 745
MaeII ACGT 4 cut(s) 191, 637, 718, 800
MaeIII GTNAC 1 cut(s) 626
MalI GATC 4 cut(s) 518, 528, 534, 609
MboI GATC 4 cut(s) 516, 526, 532, 607
MboII GAAGA 3 cut(s) 32, 686, 734
MfeI CAATTG 1 cut(s) 115
MflI RGATCY 1 cut(s) 532
MhlI GDGCHC 1 cut(s) 368
MluCI AATT 6 cut(s) 29, 115, 173, 492, 548, 603
MlyI GAGTC 2 cut(s) 264, 470
MmeI TCCRAC 3 cut(s) 40, 247, 448
MnlI CCTC 6 cut(s) 100, 151, 190, 193, 572, 672
MseI TTAA 3 cut(s) 615, 807, 838
MspI CCGG 2 cut(s) 282, 416
MspR9I CCNGG 3 cut(s) 282, 416, 666
MunI CAATTG 1 cut(s) 115
MvaI CCWGG 1 cut(s) 666
MvnI CGCG 1 cut(s) 138
MwoI GCNNNNNNNGC 5 cut(s) 129, 250, 256, 303, 559
NciI CCSGG 2 cut(s) 282, 416
NdeII GATC 4 cut(s) 516, 526, 532, 607
NlaIII CATG 3 cut(s) 448, 578, 749
NlaIV GGNNCC 3 cut(s) 231, 472, 678
NmuCI GTSAC 1 cut(s) 626
NotI GCGGCCGC 1 cut(s) 219
PciSI GCTCTTC 1 cut(s) 45
PfeI GAWTC 2 cut(s) 645, 766
PflMI CCANNNNNTGG 2 cut(s) 313, 569
PleI GAGTC 2 cut(s) 264, 469
PpsI GAGTC 2 cut(s) 264, 469
Psp1406I AACGTT 1 cut(s) 800
Psp6I CCWGG 1 cut(s) 664
PspGI CCWGG 1 cut(s) 664
PspN4I GGNNCC 3 cut(s) 231, 472, 678
PspPI GGNCC 2 cut(s) 169, 676
PsuI RGATCY 1 cut(s) 532
RsaI GTAC 2 cut(s) 293, 510
RsaNI GTAC 2 cut(s) 292, 509
SapI GCTCTTC 1 cut(s) 45
SaqAI TTAA 3 cut(s) 615, 807, 838
Sau3AI GATC 4 cut(s) 516, 526, 532, 607
Sau96I GGNCC 2 cut(s) 169, 676
ScaI AGTACT 1 cut(s) 510
SchI GAGTC 2 cut(s) 264, 470
ScrFI CCNGG 3 cut(s) 282, 416, 666
SduI GDGCHC 1 cut(s) 368
SetI ASST 8 cut(s) 194, 212, 252, 349, 361, 640, 721, 803
SfaNI GCATC 3 cut(s) 322, 400, 745
SfcI CTRYAG 1 cut(s) 336
SinI GGWCC 1 cut(s) 676
Sse9I AATT 6 cut(s) 29, 115, 173, 492, 548, 603
StyD4I CCNGG 3 cut(s) 280, 414, 664
StyI CCWWGG 1 cut(s) 822
TaaI ACNGT 2 cut(s) 103, 370
TaiI ACGT 4 cut(s) 194, 640, 721, 803
TaqI TCGA 1 cut(s) 321
TasI AATT 6 cut(s) 29, 115, 173, 492, 548, 603
TatI WGTACW 2 cut(s) 291, 508
TauI GCSGC 8 cut(s) 123, 126, 202, 221, 224, 556, 661, 797
TfiI GAWTC 2 cut(s) 645, 766
Tru1I TTAA 3 cut(s) 615, 807, 838
Tru9I TTAA 3 cut(s) 615, 807, 838
TscAI CASTG 2 cut(s) 134, 373
TseFI GTSAC 1 cut(s) 626
TseI GCWGC 4 cut(s) 77, 250, 297, 502
Tsp45I GTSAC 1 cut(s) 626
TspDTI ATGAA 2 cut(s) 32, 461
TspRI CASTG 2 cut(s) 134, 373
Van91I CCANNNNNTGG 2 cut(s) 313, 569
VpaK11BI GGWCC 1 cut(s) 676
XapI RAATTY 1 cut(s) 492
XmiI GTMKAC 1 cut(s) 194
ZrmI AGTACT 1 cut(s) 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.