Rh7BG193300
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0003935
Physical Location & Seq
Reverse (-)
15761902 .. 15762210
309 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG193300.1

Sequence Viewer

Length: 309 bp
ATGGAAATTGCGAGGATGATCAAGGAGGCAGAAAAGTACAGGTTTGAAGACGAGGAGAATAAGAAGAAATTGGAGGCTAAGGCTGCATTGATGGACTATACACATGACATGGAGGAAAAAATTCCTAGTCTCAGAAAGCTCAAGCGAGCAGACAAGAAGAAATATGAGGATGAGGTTGCAAAGACCAGCCGGTGGCTTGACGAGAACGAAAACCGACTTGCTGAATGCAAAGAATATGAGGACCAGATGAAAAAGCTTGAGAACGTTTGCAATCGCATAATTGGCAAGATGCACCAGGATGGGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

102

Amino Acids

12.36

Weight (kDa)

6.76

Isoelectric Point (pI)

45.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 2 - 98 2e-07 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 192
AclI AACGTT 1 cut(s) 264
AcsI RAATTY 1 cut(s) 120
AfaI GTAC 1 cut(s) 38
AfiI CCNNNNNNNGG 1 cut(s) 192
AgsI TTSAA 1 cut(s) 47
AjnI CCWGG 1 cut(s) 294
AluBI AGCT 2 cut(s) 139, 256
AluI AGCT 2 cut(s) 139, 256
Alw26I GTCTC 1 cut(s) 134
ApeKI GCWGC 1 cut(s) 83
ApoI RAATTY 1 cut(s) 120
Asp700I GAANNNNTTC 1 cut(s) 120
AspS9I GGNCC 1 cut(s) 241
AvaII GGWCC 1 cut(s) 241
BbsI GAAGAC 1 cut(s) 54
BbvI GCAGC 1 cut(s) 70
BccI CCATC 2 cut(s) 85, 293
BciT130I CCWGG 1 cut(s) 296
BclI TGATCA 1 cut(s) 18
BcoDI GTCTC 1 cut(s) 134
BfaI CTAG 1 cut(s) 126
BisI GCNGC 1 cut(s) 84
BlsI GCNGC 1 cut(s) 85
Bme1390I CCNGG 1 cut(s) 296
Bme18I GGWCC 1 cut(s) 241
BmgT120I GGNCC 1 cut(s) 241
BmrFI CCNGG 1 cut(s) 296
BmsI GCATC 1 cut(s) 279
BpiI GAAGAC 1 cut(s) 54
Bpu10I CCTNAGC 1 cut(s) 78
BpuEI CTTGAG 2 cut(s) 125, 278
Bsc4I CCNNNNNNNGG 1 cut(s) 192
Bse118I RCCGGY 1 cut(s) 189
BseBI CCWGG 1 cut(s) 296
BseGI GGATG 3 cut(s) 21, 175, 304
BseLI CCNNNNNNNGG 1 cut(s) 192
BseMII CTCAG 1 cut(s) 145
BseRI GAGGAG 1 cut(s) 68
BseXI GCAGC 1 cut(s) 70
BsiSI CCGG 1 cut(s) 190
BslI CCNNNNNNNGG 1 cut(s) 192
BsmAI GTCTC 1 cut(s) 134
BsmI GAATGC 1 cut(s) 230
Bsp143I GATC 1 cut(s) 18
BspCNI CTCAG 1 cut(s) 144
BsrFI RCCGGY 1 cut(s) 189
BssAI RCCGGY 1 cut(s) 189
BssMI GATC 1 cut(s) 18
Bst2UI CCWGG 1 cut(s) 296
BstC8I GCNNGC 1 cut(s) 147
BstDEI CTNAG 2 cut(s) 78, 131
BstF5I GGATG 3 cut(s) 21, 175, 304
BstKTI GATC 1 cut(s) 21
BstMAI GTCTC 1 cut(s) 134
BstMBI GATC 1 cut(s) 18
BstMWI GCNNNNNNNGC 2 cut(s) 83, 282
BstNI CCWGG 1 cut(s) 296
BstSCI CCNGG 1 cut(s) 294
BstV1I GCAGC 1 cut(s) 70
BstV2I GAAGAC 1 cut(s) 54
BtsCI GGATG 3 cut(s) 21, 175, 304
Cac8I GCNNGC 1 cut(s) 147
Cfr10I RCCGGY 1 cut(s) 189
Cfr13I GGNCC 1 cut(s) 241
Csp6I GTAC 1 cut(s) 37
CviAII CATG 2 cut(s) 104, 109
CviJI RGCY 6 cut(s) 77, 83, 139, 189, 196, 256
CviKI_1 RGCY 6 cut(s) 77, 83, 139, 189, 196, 256
CviQI GTAC 1 cut(s) 37
DdeI CTNAG 2 cut(s) 78, 131
DpnI GATC 1 cut(s) 20
DpnII GATC 1 cut(s) 18
Eco47I GGWCC 1 cut(s) 241
EcoRII CCWGG 1 cut(s) 294
FaeI CATG 2 cut(s) 107, 112
FaiI YATR 6 cut(s) 99, 105, 110, 165, 237, 278
FatI CATG 2 cut(s) 103, 108
FbaI TGATCA 1 cut(s) 18
Fnu4HI GCNGC 1 cut(s) 84
FokI GGATG 2 cut(s) 28, 182
Fsp4HI GCNGC 1 cut(s) 84
FspBI CTAG 1 cut(s) 126
GluI GCNGC 1 cut(s) 84
HapII CCGG 1 cut(s) 190
Hin1II CATG 2 cut(s) 107, 112
HindIII AAGCTT 1 cut(s) 254
HpaII CCGG 1 cut(s) 190
Hpy188I TCNGA 1 cut(s) 134
HpyCH4IV ACGT 1 cut(s) 264
HpyCH4V TGCA 5 cut(s) 86, 179, 228, 270, 292
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 282
HpyF3I CTNAG 2 cut(s) 78, 131
HpySE526I ACGT 1 cut(s) 264
Hsp92II CATG 2 cut(s) 107, 112
Ksp22I TGATCA 1 cut(s) 18
Kzo9I GATC 1 cut(s) 18
LpnPI CCDG 5 cut(s) 25, 199, 203, 257, 281
Lsp1109I GCAGC 1 cut(s) 70
LweI GCATC 1 cut(s) 279
MaeI CTAG 1 cut(s) 126
MaeII ACGT 1 cut(s) 264
MalI GATC 1 cut(s) 20
MboI GATC 1 cut(s) 18
MboII GAAGA 3 cut(s) 59, 76, 169
MluCI AATT 4 cut(s) 6, 68, 120, 279
MnlI CCTC 8 cut(s) 6, 19, 46, 67, 106, 160, 166, 232
MroXI GAANNNNTTC 1 cut(s) 120
MslI CAYNNNNRTG 1 cut(s) 297
MspI CCGG 1 cut(s) 190
MspR9I CCNGG 1 cut(s) 296
Mva1269I GAATGC 1 cut(s) 230
MvaI CCWGG 1 cut(s) 296
MwoI GCNNNNNNNGC 2 cut(s) 83, 282
NdeII GATC 1 cut(s) 18
NlaIII CATG 2 cut(s) 107, 112
PctI GAATGC 1 cut(s) 230
PdmI GAANNNNTTC 1 cut(s) 120
PflMI CCANNNNNTGG 1 cut(s) 192
PkrI GCNGC 1 cut(s) 85
Psp1406I AACGTT 1 cut(s) 264
Psp6I CCWGG 1 cut(s) 294
PspGI CCWGG 1 cut(s) 294
PspPI GGNCC 1 cut(s) 241
RsaI GTAC 1 cut(s) 38
RsaNI GTAC 1 cut(s) 37
RseI CAYNNNNRTG 1 cut(s) 297
SatI GCNGC 1 cut(s) 84
Sau3AI GATC 1 cut(s) 18
Sau96I GGNCC 1 cut(s) 241
ScrFI CCNGG 1 cut(s) 296
SetI ASST 5 cut(s) 44, 141, 177, 258, 267
SfaNI GCATC 1 cut(s) 279
SinI GGWCC 1 cut(s) 241
SmiMI CAYNNNNRTG 1 cut(s) 297
SmlI CTYRAG 2 cut(s) 140, 257
SmoI CTYRAG 2 cut(s) 140, 257
Sse9I AATT 4 cut(s) 6, 68, 120, 279
SspMI CTAG 1 cut(s) 126
StyD4I CCNGG 1 cut(s) 294
TaiI ACGT 1 cut(s) 267
TasI AATT 4 cut(s) 6, 68, 120, 279
TatI WGTACW 1 cut(s) 36
TseI GCWGC 1 cut(s) 83
TspDTI ATGAA 1 cut(s) 263
Van91I CCANNNNNTGG 1 cut(s) 192
VpaK11BI GGWCC 1 cut(s) 241
XapI RAATTY 1 cut(s) 120
XmnI GAANNNNTTC 1 cut(s) 120
XspI CTAG 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.