Rh7AG186500
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0003935
Physical Location & Seq
Reverse (-)
16642754 .. 16643104
351 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG186500.1

Sequence Viewer

Length: 351 bp
ATGTTATCTAAGGAGGAAATCGAGAAGATGGTCAAGGAGGCCGAGAAGTATAGGTCTGAGGACGAGGAGAACACGAAGAGAATGGAGGCGAAGCTTGCATTGGAAGAGTATGCATATAACATGAAGGACACTATTTTTAATCTCCCAAAACTCAACCGAGTCGACAAGAAGAAAATTGTGCTTGCATTTGAAGATGTCATTCGATGGCTTGATGAGAATAAGGATCAACTTGCTAAATGTGAAGAATATGAGGATAAAAGGGAAAAGCTTGAAAACCTCTGCATTCCCATATTTGCCGAGATGTATCGCACCATGTGCTTTGATCAGAAAGTGGAGAGTTTCGTCCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

116

Amino Acids

14.07

Weight (kDa)

4.92

Isoelectric Point (pI)

48.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 2 - 102 9.8e-11 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 162
AclWI GGATC 1 cut(s) 231
AdeI CACNNNGTG 1 cut(s) 315
AgsI TTSAA 2 cut(s) 191, 272
AjuI GAANNNNNNNTTGG 2 cut(s) 83, 115
AluBI AGCT 2 cut(s) 94, 268
AluI AGCT 2 cut(s) 94, 268
AlwI GGATC 1 cut(s) 231
AoxI GGCC 1 cut(s) 39
BccI CCATC 2 cut(s) 22, 198
BclI TGATCA 1 cut(s) 322
BseMII CTCAG 1 cut(s) 48
BseRI GAGGAG 1 cut(s) 80
BshFI GGCC 1 cut(s) 41
BsmI GAATGC 1 cut(s) 282
BsnI GGCC 1 cut(s) 41
Bsp143I GATC 2 cut(s) 223, 322
BspANI GGCC 1 cut(s) 41
BspCNI CTCAG 1 cut(s) 49
BspPI GGATC 1 cut(s) 231
BssMI GATC 2 cut(s) 223, 322
Bst6I CTCTTC 2 cut(s) 71, 99
BstAPI GCANNNNNTGC 1 cut(s) 315
BstC8I GCNNGC 2 cut(s) 96, 183
BstDEI CTNAG 2 cut(s) 9, 57
BstKTI GATC 2 cut(s) 226, 325
BstMBI GATC 2 cut(s) 223, 322
BstMWI GCNNNNNNNGC 2 cut(s) 95, 315
BsuRI GGCC 1 cut(s) 41
Cac8I GCNNGC 2 cut(s) 96, 183
CviAII CATG 2 cut(s) 121, 313
CviJI RGCY 4 cut(s) 41, 94, 208, 268
CviKI_1 RGCY 4 cut(s) 41, 94, 208, 268
DdeI CTNAG 2 cut(s) 9, 57
DpnI GATC 2 cut(s) 225, 324
DpnII GATC 2 cut(s) 223, 322
DraIII CACNNNGTG 1 cut(s) 315
Eam1104I CTCTTC 2 cut(s) 71, 99
EarI CTCTTC 2 cut(s) 71, 99
EcoT22I ATGCAT 1 cut(s) 115
FaeI CATG 2 cut(s) 124, 316
FaiI YATR 8 cut(s) 51, 111, 115, 117, 122, 249, 290, 314
FatI CATG 2 cut(s) 120, 312
FbaI TGATCA 1 cut(s) 322
FblI GTMKAC 1 cut(s) 162
HaeIII GGCC 1 cut(s) 41
Hin1II CATG 2 cut(s) 124, 316
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HindIII AAGCTT 2 cut(s) 92, 266
HinfI GANTC 1 cut(s) 159
Hpy166II GTNNAC 1 cut(s) 163
Hpy188I TCNGA 2 cut(s) 58, 327
Hpy188III TCNNGA 1 cut(s) 22
Hpy8I GTNNAC 1 cut(s) 163
HpyAV CCTTC 1 cut(s) 118
HpyCH4V TGCA 4 cut(s) 98, 113, 185, 282
HpyF10VI GCNNNNNNNGC 2 cut(s) 95, 315
HpyF3I CTNAG 2 cut(s) 9, 57
Hsp92II CATG 2 cut(s) 124, 316
Ksp22I TGATCA 1 cut(s) 322
Kzo9I GATC 2 cut(s) 223, 322
MalI GATC 2 cut(s) 225, 324
MboI GATC 2 cut(s) 223, 322
MboII GAAGA 6 cut(s) 37, 88, 116, 181, 203, 254
MluCI AATT 1 cut(s) 174
MlyI GAGTC 1 cut(s) 168
MnlI CCTC 7 cut(s) 7, 31, 52, 58, 79, 244, 287
Mph1103I ATGCAT 1 cut(s) 115
MseI TTAA 1 cut(s) 138
Mva1269I GAATGC 1 cut(s) 282
MwoI GCNNNNNNNGC 2 cut(s) 95, 315
NdeII GATC 2 cut(s) 223, 322
NlaIII CATG 2 cut(s) 124, 316
NmeAIII GCCGAG 2 cut(s) 67, 322
NsiI ATGCAT 1 cut(s) 115
PctI GAATGC 1 cut(s) 282
PleI GAGTC 1 cut(s) 167
PpsI GAGTC 1 cut(s) 167
SalI GTCGAC 1 cut(s) 161
SaqAI TTAA 1 cut(s) 138
Sau3AI GATC 2 cut(s) 223, 322
SchI GAGTC 1 cut(s) 168
SetI ASST 4 cut(s) 56, 96, 270, 279
Sse9I AATT 1 cut(s) 174
TaqI TCGA 3 cut(s) 21, 162, 202
TasI AATT 1 cut(s) 174
Tru1I TTAA 1 cut(s) 138
Tru9I TTAA 1 cut(s) 138
TspDTI ATGAA 1 cut(s) 137
XmiI GTMKAC 1 cut(s) 162
Zsp2I ATGCAT 1 cut(s) 115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.