ubiquitinyl hydrolase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TDBD | PF16135 | 103 - 153 | 1.5e-18 | Tify domain binding domain |
| PHD-1st_NSD | PF23011 | 181 - 223 | 6.1e-06 | Histone-lysine N-methyltransferase NSD-like, PHD zinc finger 1 |
| PHD | PF00628 | 184 - 223 | 1.9e-08 | PHD-finger |
| IDM1_C | PF23209 | 338 - 476 | 2.2e-46 | Increased DNA methylation 1, C-terminal domain |
| MATH_2 | PF22486 | 514 - 618 | 3.4e-16 | MATH domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 340 |
| Acc65I | GGTACC | 1 cut(s) | 1202 |
| AccB1I | GGYRCC | 2 cut(s) | 1202, 1685 |
| AciI | CCGC | 1 cut(s) | 1621 |
| AclWI | GGATC | 2 cut(s) | 1172, 1904 |
| AcsI | RAATTY | 8 cut(s) | 17, 867, 1473, 1554, 1724, 1902, 2177, 2453 |
| AcuI | CTGAAG | 7 cut(s) | 92, 1051, 1206, 1902, 2206, 2462, 2646 |
| AcvI | CACGTG | 1 cut(s) | 1548 |
| AdeI | CACNNNGTG | 1 cut(s) | 365 |
| AfaI | GTAC | 6 cut(s) | 214, 553, 1191, 1204, 1847, 2158 |
| AfeI | AGCGCT | 1 cut(s) | 1825 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1037, 1199, 1469, 1579, 2266 |
| AjnI | CCWGG | 3 cut(s) | 1962, 2106, 2279 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1686, 1718 |
| AleI | CACNNNNGTG | 1 cut(s) | 1705 |
| Alw26I | GTCTC | 7 cut(s) | 441, 959, 1543, 1586, 1828, 2530, 2558 |
| AlwI | GGATC | 2 cut(s) | 1172, 1904 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1381, 2207 |
| Aor51HI | AGCGCT | 1 cut(s) | 1825 |
| AoxI | GGCC | 3 cut(s) | 841, 1874, 2445 |
| ApoI | RAATTY | 8 cut(s) | 17, 867, 1473, 1554, 1724, 1902, 2177, 2453 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2447 |
| Asp718I | GGTACC | 1 cut(s) | 1202 |
| AspLEI | GCGC | 3 cut(s) | 281, 1826, 1927 |
| AspS9I | GGNCC | 3 cut(s) | 1521, 1874, 2013 |
| AsuHPI | GGTGA | 4 cut(s) | 56, 584, 659, 1619 |
| AsuII | TTCGAA | 1 cut(s) | 2088 |
| AvaII | GGWCC | 2 cut(s) | 1521, 2013 |
| AxyI | CCTNAGG | 1 cut(s) | 758 |
| BanI | GGYRCC | 2 cut(s) | 1202, 1685 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2149, 2181 |
| BauI | CACGAG | 2 cut(s) | 144, 848 |
| BbrPI | CACGTG | 1 cut(s) | 1548 |
| BbsI | GAAGAC | 1 cut(s) | 2381 |
| BbvCI | CCTCAGC | 1 cut(s) | 152 |
| BceAI | ACGGC | 1 cut(s) | 76 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 610, 644 |
| BciT130I | CCWGG | 3 cut(s) | 1964, 2108, 2281 |
| BciVI | GTATCC | 2 cut(s) | 1402, 1644 |
| BcoDI | GTCTC | 7 cut(s) | 441, 959, 1543, 1586, 1828, 2530, 2558 |
| BfaI | CTAG | 8 cut(s) | 299, 443, 494, 1713, 2082, 2420, 2471, 2582 |
| BfmI | CTRYAG | 6 cut(s) | 388, 397, 688, 811, 1149, 1373 |
| BfoI | RGCGCY | 1 cut(s) | 1827 |
| BfuAI | ACCTGC | 1 cut(s) | 340 |
| BfuI | GTATCC | 2 cut(s) | 1402, 1644 |
| BlpI | GCTNAGC | 1 cut(s) | 2589 |
| BmcAI | AGTACT | 2 cut(s) | 1847, 2158 |
| Bme1390I | CCNGG | 3 cut(s) | 1964, 2108, 2281 |
| Bme18I | GGWCC | 2 cut(s) | 1521, 2013 |
| BmgT120I | GGNCC | 3 cut(s) | 1521, 1874, 2013 |
| BmiI | GGNNCC | 5 cut(s) | 1204, 1522, 1687, 1875, 1894 |
| BmrFI | CCNGG | 3 cut(s) | 1964, 2108, 2281 |
| BmrI | ACTGGG | 2 cut(s) | 1047, 2317 |
| BmuI | ACTGGG | 2 cut(s) | 1047, 2317 |
| BpiI | GAAGAC | 1 cut(s) | 2381 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 280, 312, 2555, 2587 |
| BpmI | CTGGAG | 1 cut(s) | 2285 |
| Bpu10I | CCTNAGC | 1 cut(s) | 152 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2589 |
| Bpu14I | TTCGAA | 1 cut(s) | 2088 |
| BpuEI | CTTGAG | 2 cut(s) | 31, 2156 |
| Bsa29I | ATCGAT | 1 cut(s) | 592 |
| BsaAI | YACGTR | 1 cut(s) | 1548 |
| BsaBI | GATNNNNATC | 1 cut(s) | 598 |
| BsaI | GGTCTC | 2 cut(s) | 1828, 2558 |
| BsaJI | CCNNGG | 3 cut(s) | 1573, 2106, 2349 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1164, 1194, 2258, 2288 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1037, 1199, 1469, 1579, 2266 |
| Bse1I | ACTGG | 7 cut(s) | 656, 750, 1042, 1609, 1762, 2154, 2323 |
| Bse21I | CCTNAGG | 1 cut(s) | 758 |
| Bse3DI | GCAATG | 1 cut(s) | 966 |
| Bse8I | GATNNNNATC | 1 cut(s) | 598 |
| BseBI | CCWGG | 3 cut(s) | 1964, 2108, 2281 |
| BseCI | ATCGAT | 1 cut(s) | 592 |
| BseDI | CCNNGG | 3 cut(s) | 1573, 2106, 2349 |
| BseGI | GGATG | 9 cut(s) | 5, 205, 292, 571, 640, 1629, 1681, 2116, 2284 |
| BseJI | GATNNNNATC | 1 cut(s) | 598 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1037, 1199, 1469, 1579, 2266 |
| BseMI | GCAATG | 1 cut(s) | 966 |
| BseMII | CTCAG | 4 cut(s) | 143, 749, 1581, 1704 |
| BseNI | ACTGG | 7 cut(s) | 656, 750, 1042, 1609, 1762, 2154, 2323 |
| BsgI | GTGCAG | 1 cut(s) | 191 |
| BshFI | GGCC | 3 cut(s) | 843, 1876, 2447 |
| BshNI | GGYRCC | 2 cut(s) | 1202, 1685 |
| BshVI | ATCGAT | 1 cut(s) | 592 |
| BslFI | GGGAC | 2 cut(s) | 1292, 2304 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1037, 1199, 1469, 1579, 2266 |
| BsmAI | GTCTC | 7 cut(s) | 441, 959, 1543, 1586, 1828, 2530, 2558 |
| BsmFI | GGGAC | 2 cut(s) | 1292, 2304 |
| BsmI | GAATGC | 3 cut(s) | 338, 2306, 2339 |
| BsnI | GGCC | 3 cut(s) | 843, 1876, 2447 |
| Bso31I | GGTCTC | 2 cut(s) | 1828, 2558 |
| Bsp119I | TTCGAA | 1 cut(s) | 2088 |
| Bsp1407I | TGTACA | 2 cut(s) | 212, 551 |
| Bsp143I | GATC | 5 cut(s) | 589, 1164, 1313, 1909, 2611 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2589 |
| BspACI | CCGC | 1 cut(s) | 1621 |
| BspANI | GGCC | 3 cut(s) | 843, 1876, 2447 |
| BspCNI | CTCAG | 4 cut(s) | 144, 750, 1582, 1703 |
| BspDI | ATCGAT | 1 cut(s) | 592 |
| BspHI | TCATGA | 1 cut(s) | 2214 |
| BspLI | GGNNCC | 5 cut(s) | 1204, 1522, 1687, 1875, 1894 |
| BspMAI | CTGCAG | 4 cut(s) | 392, 692, 815, 1377 |
| BspMI | ACCTGC | 1 cut(s) | 340 |
| BspPI | GGATC | 2 cut(s) | 1172, 1904 |
| BspQI | GCTCTTC | 1 cut(s) | 476 |
| BspT104I | TTCGAA | 1 cut(s) | 2088 |
| BspT107I | GGYRCC | 2 cut(s) | 1202, 1685 |
| BspTNI | GGTCTC | 2 cut(s) | 1828, 2558 |
| BsrDI | GCAATG | 1 cut(s) | 966 |
| BsrGI | TGTACA | 2 cut(s) | 212, 551 |
| BsrI | ACTGG | 7 cut(s) | 656, 750, 1042, 1609, 1762, 2154, 2323 |
| BssECI | CCNNGG | 3 cut(s) | 1573, 2106, 2349 |
| BssMI | GATC | 5 cut(s) | 589, 1164, 1313, 1909, 2611 |
| BssSI | CACGAG | 2 cut(s) | 144, 848 |
| BssT1I | CCWWGG | 1 cut(s) | 2349 |
| Bst2BI | CACGAG | 2 cut(s) | 144, 848 |
| Bst2UI | CCWGG | 3 cut(s) | 1964, 2108, 2281 |
| Bst4CI | ACNGT | 9 cut(s) | 217, 377, 556, 824, 1117, 1150, 1159, 1651, 1738 |
| Bst6I | CTCTTC | 2 cut(s) | 48, 476 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 342, 2345 |
| BstAUI | TGTACA | 2 cut(s) | 212, 551 |
| BstBAI | YACGTR | 1 cut(s) | 1548 |
| BstBI | TTCGAA | 1 cut(s) | 2088 |
| BstC8I | GCNNGC | 5 cut(s) | 347, 385, 667, 1990, 2071 |
| BstDEI | CTNAG | 6 cut(s) | 152, 758, 1590, 1690, 2540, 2589 |
| BstDSI | CCRYGG | 1 cut(s) | 1573 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2264 |
| BstF5I | GGATG | 9 cut(s) | 5, 205, 292, 571, 640, 1629, 1681, 2116, 2284 |
| BstH2I | RGCGCY | 1 cut(s) | 1827 |
| BstHHI | GCGC | 3 cut(s) | 281, 1826, 1927 |
| BstKTI | GATC | 5 cut(s) | 592, 1167, 1316, 1912, 2614 |
| BstMAI | GTCTC | 7 cut(s) | 441, 959, 1543, 1586, 1828, 2530, 2558 |
| BstMBI | GATC | 5 cut(s) | 589, 1164, 1313, 1909, 2611 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 342, 1181, 1867, 2075, 2345 |
| BstNI | CCWGG | 3 cut(s) | 1964, 2108, 2281 |
| BstNSI | RCATGY | 2 cut(s) | 1952, 2073 |
| BstSCI | CCNGG | 3 cut(s) | 1962, 2106, 2279 |
| BstSFI | CTRYAG | 6 cut(s) | 388, 397, 688, 811, 1149, 1373 |
| BstV2I | GAAGAC | 1 cut(s) | 2381 |
| BstX2I | RGATCY | 2 cut(s) | 1164, 1909 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 722, 1707 |
| BstYI | RGATCY | 2 cut(s) | 1164, 1909 |
| Bsu15I | ATCGAT | 1 cut(s) | 592 |
| Bsu36I | CCTNAGG | 1 cut(s) | 758 |
| BsuI | GTATCC | 2 cut(s) | 1402, 1644 |
| BsuRI | GGCC | 3 cut(s) | 843, 1876, 2447 |
| BsuTUI | ATCGAT | 1 cut(s) | 592 |
| BtgI | CCRYGG | 1 cut(s) | 1573 |
| BtsCI | GGATG | 9 cut(s) | 5, 205, 292, 571, 640, 1629, 1681, 2116, 2284 |
| BtsI | GCAGTG | 1 cut(s) | 2343 |
| BtsIMutI | CAGTG | 7 cut(s) | 734, 879, 1035, 1113, 1602, 1647, 2343 |
| BveI | ACCTGC | 1 cut(s) | 340 |
| Cac8I | GCNNGC | 5 cut(s) | 347, 385, 667, 1990, 2071 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1381, 2207 |
| CciI | TCATGA | 1 cut(s) | 2214 |
| CfoI | GCGC | 3 cut(s) | 281, 1826, 1927 |
| Cfr13I | GGNCC | 3 cut(s) | 1521, 1874, 2013 |
| ClaI | ATCGAT | 1 cut(s) | 592 |
| CseI | GACGC | 2 cut(s) | 1145, 1516 |
| Csp6I | GTAC | 6 cut(s) | 213, 552, 1190, 1203, 1846, 2157 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1924, 1959 |
| CviQI | GTAC | 6 cut(s) | 213, 552, 1190, 1203, 1846, 2157 |
| DdeI | CTNAG | 6 cut(s) | 152, 758, 1590, 1690, 2540, 2589 |
| DpnI | GATC | 5 cut(s) | 591, 1166, 1315, 1911, 2613 |
| DpnII | GATC | 5 cut(s) | 589, 1164, 1313, 1909, 2611 |
| DraI | TTTAAA | 1 cut(s) | 2028 |
| DraIII | CACNNNGTG | 1 cut(s) | 365 |
| Eam1104I | CTCTTC | 2 cut(s) | 48, 476 |
| EarI | CTCTTC | 2 cut(s) | 48, 476 |
| EciI | GGCGGA | 1 cut(s) | 1636 |
| Eco130I | CCWWGG | 1 cut(s) | 2349 |
| Eco147I | AGGCCT | 2 cut(s) | 843, 2447 |
| Eco31I | GGTCTC | 2 cut(s) | 1828, 2558 |
| Eco32I | GATATC | 3 cut(s) | 1046, 1060, 1800 |
| Eco47I | GGWCC | 2 cut(s) | 1521, 2013 |
| Eco47III | AGCGCT | 1 cut(s) | 1825 |
| Eco57I | CTGAAG | 7 cut(s) | 92, 1051, 1206, 1902, 2206, 2462, 2646 |
| Eco72I | CACGTG | 1 cut(s) | 1548 |
| Eco81I | CCTNAGG | 1 cut(s) | 758 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2264 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1874, 2013 |
| EcoRII | CCWGG | 3 cut(s) | 1962, 2106, 2279 |
| EcoRV | GATATC | 3 cut(s) | 1046, 1060, 1800 |
| EcoT14I | CCWWGG | 1 cut(s) | 2349 |
| EcoT22I | ATGCAT | 2 cut(s) | 1251, 1401 |
| ErhI | CCWWGG | 1 cut(s) | 2349 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1179, 1211 |
| FaqI | GGGAC | 2 cut(s) | 1292, 2304 |
| FokI | GGATG | 8 cut(s) | 192, 279, 578, 647, 1636, 1688, 2123, 2271 |
| FspBI | CTAG | 8 cut(s) | 299, 443, 494, 1713, 2082, 2420, 2471, 2582 |
| GlaI | GCGC | 3 cut(s) | 280, 1825, 1926 |
| GsuI | CTGGAG | 1 cut(s) | 2285 |
| HaeII | RGCGCY | 1 cut(s) | 1827 |
| HaeIII | GGCC | 3 cut(s) | 843, 1876, 2447 |
| HgaI | GACGC | 2 cut(s) | 1145, 1516 |
| HhaI | GCGC | 3 cut(s) | 281, 1826, 1927 |
| Hin6I | GCGC | 3 cut(s) | 279, 1824, 1925 |
| HinP1I | GCGC | 3 cut(s) | 279, 1824, 1925 |
| HincII | GTYRAC | 1 cut(s) | 883 |
| HindII | GTYRAC | 1 cut(s) | 883 |
| HindIII | AAGCTT | 2 cut(s) | 1986, 2591 |
| HinfI | GANTC | 6 cut(s) | 289, 790, 1392, 2036, 2570, 2630 |
| HphI | GGTGA | 4 cut(s) | 56, 584, 659, 1619 |
| Hpy166II | GTNNAC | 4 cut(s) | 734, 883, 2328, 2414 |
| Hpy8I | GTNNAC | 4 cut(s) | 734, 883, 2328, 2414 |
| HpyCH4III | ACNGT | 9 cut(s) | 217, 377, 556, 824, 1117, 1150, 1159, 1651, 1738 |
| HpyCH4IV | ACGT | 2 cut(s) | 736, 1547 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 342, 1181, 1867, 2075, 2345 |
| HpyF3I | CTNAG | 6 cut(s) | 152, 758, 1590, 1690, 2540, 2589 |
| HpySE526I | ACGT | 2 cut(s) | 736, 1547 |
| HspAI | GCGC | 3 cut(s) | 279, 1824, 1925 |
| KpnI | GGTACC | 1 cut(s) | 1206 |
| Kzo9I | GATC | 5 cut(s) | 589, 1164, 1313, 1909, 2611 |
| LguI | GCTCTTC | 1 cut(s) | 476 |
| LmnI | GCTCC | 4 cut(s) | 1172, 1858, 1867, 2437 |
| MaeI | CTAG | 8 cut(s) | 299, 443, 494, 1713, 2082, 2420, 2471, 2582 |
| MaeII | ACGT | 2 cut(s) | 736, 1547 |
| MaeIII | GTNAC | 5 cut(s) | 181, 392, 647, 897, 1077 |
| MalI | GATC | 5 cut(s) | 591, 1166, 1315, 1911, 2613 |
| MboI | GATC | 5 cut(s) | 589, 1164, 1313, 1909, 2611 |
| MflI | RGATCY | 2 cut(s) | 1164, 1909 |
| MlyI | GAGTC | 3 cut(s) | 298, 2045, 2564 |
| Mph1103I | ATGCAT | 2 cut(s) | 1251, 1401 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2447 |
| MseI | TTAA | 9 cut(s) | 1014, 1023, 1142, 1253, 1356, 1743, 1850, 2027, 2484 |
| MslI | CAYNNNNRTG | 4 cut(s) | 720, 1086, 1546, 1705 |
| MspR9I | CCNGG | 3 cut(s) | 1964, 2108, 2281 |
| Mva1269I | GAATGC | 3 cut(s) | 338, 2306, 2339 |
| MvaI | CCWGG | 3 cut(s) | 1964, 2108, 2281 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 342, 1181, 1867, 2075, 2345 |
| NdeII | GATC | 5 cut(s) | 589, 1164, 1313, 1909, 2611 |
| NlaIV | GGNNCC | 5 cut(s) | 1204, 1522, 1687, 1875, 1894 |
| NmuCI | GTSAC | 3 cut(s) | 647, 897, 1077 |
| NsiI | ATGCAT | 2 cut(s) | 1251, 1401 |
| NspI | RCATGY | 2 cut(s) | 1952, 2073 |
| NspV | TTCGAA | 1 cut(s) | 2088 |
| OliI | CACNNNNGTG | 1 cut(s) | 1705 |
| PaeI | GCATGC | 1 cut(s) | 2073 |
| PagI | TCATGA | 1 cut(s) | 2214 |
| PceI | AGGCCT | 2 cut(s) | 843, 2447 |
| PciSI | GCTCTTC | 1 cut(s) | 476 |
| PctI | GAATGC | 3 cut(s) | 338, 2306, 2339 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2447 |
| PfeI | GAWTC | 3 cut(s) | 790, 1392, 2630 |
| PfoI | TCCNGGA | 1 cut(s) | 1962 |
| PleI | GAGTC | 3 cut(s) | 297, 2044, 2564 |
| PmaCI | CACGTG | 1 cut(s) | 1548 |
| PmlI | CACGTG | 1 cut(s) | 1548 |
| PpsI | GAGTC | 3 cut(s) | 297, 2044, 2564 |
| Ppu21I | YACGTR | 1 cut(s) | 1548 |
| PpuMI | RGGWCCY | 1 cut(s) | 2013 |
| Psp5II | RGGWCCY | 1 cut(s) | 2013 |
| Psp6I | CCWGG | 3 cut(s) | 1962, 2106, 2279 |
| PspCI | CACGTG | 1 cut(s) | 1548 |
| PspGI | CCWGG | 3 cut(s) | 1962, 2106, 2279 |
| PspN4I | GGNNCC | 5 cut(s) | 1204, 1522, 1687, 1875, 1894 |
| PspPI | GGNCC | 3 cut(s) | 1521, 1874, 2013 |
| PspPPI | RGGWCCY | 1 cut(s) | 2013 |
| PstI | CTGCAG | 4 cut(s) | 392, 692, 815, 1377 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1381, 2207 |
| PsuI | RGATCY | 2 cut(s) | 1164, 1909 |
| RsaI | GTAC | 6 cut(s) | 214, 553, 1191, 1204, 1847, 2158 |
| RsaNI | GTAC | 6 cut(s) | 213, 552, 1190, 1203, 1846, 2157 |
| RseI | CAYNNNNRTG | 4 cut(s) | 720, 1086, 1546, 1705 |
| SapI | GCTCTTC | 1 cut(s) | 476 |
| SaqAI | TTAA | 9 cut(s) | 1014, 1023, 1142, 1253, 1356, 1743, 1850, 2027, 2484 |
| Sau3AI | GATC | 5 cut(s) | 589, 1164, 1313, 1909, 2611 |
| Sau96I | GGNCC | 3 cut(s) | 1521, 1874, 2013 |
| ScaI | AGTACT | 2 cut(s) | 1847, 2158 |
| SchI | GAGTC | 3 cut(s) | 298, 2045, 2564 |
| ScrFI | CCNGG | 3 cut(s) | 1964, 2108, 2281 |
| SfcI | CTRYAG | 6 cut(s) | 388, 397, 688, 811, 1149, 1373 |
| SfuI | TTCGAA | 1 cut(s) | 2088 |
| SinI | GGWCC | 2 cut(s) | 1521, 2013 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 720, 1086, 1546, 1705 |
| SmlI | CTYRAG | 2 cut(s) | 10, 2171 |
| SmoI | CTYRAG | 2 cut(s) | 10, 2171 |
| SphI | GCATGC | 1 cut(s) | 2073 |
| SseBI | AGGCCT | 2 cut(s) | 843, 2447 |
| SsiI | CCGC | 1 cut(s) | 1621 |
| SspI | AATATT | 2 cut(s) | 415, 1999 |
| SspMI | CTAG | 8 cut(s) | 299, 443, 494, 1713, 2082, 2420, 2471, 2582 |
| StuI | AGGCCT | 2 cut(s) | 843, 2447 |
| StyD4I | CCNGG | 3 cut(s) | 1962, 2106, 2279 |
| StyI | CCWWGG | 1 cut(s) | 2349 |
| TaaI | ACNGT | 9 cut(s) | 217, 377, 556, 824, 1117, 1150, 1159, 1651, 1738 |
| TaiI | ACGT | 2 cut(s) | 739, 1550 |
| TaqI | TCGA | 6 cut(s) | 166, 529, 592, 630, 1681, 2088 |
| TaqII | GACCGA | 1 cut(s) | 2582 |
| TatI | WGTACW | 4 cut(s) | 212, 551, 1845, 2156 |
| TfiI | GAWTC | 3 cut(s) | 790, 1392, 2630 |
| Tru1I | TTAA | 9 cut(s) | 1014, 1023, 1142, 1253, 1356, 1743, 1850, 2027, 2484 |
| Tru9I | TTAA | 9 cut(s) | 1014, 1023, 1142, 1253, 1356, 1743, 1850, 2027, 2484 |
| TscAI | CASTG | 7 cut(s) | 734, 879, 1042, 1120, 1609, 1654, 2350 |
| TseFI | GTSAC | 3 cut(s) | 647, 897, 1077 |
| Tsp45I | GTSAC | 3 cut(s) | 647, 897, 1077 |
| TspDTI | ATGAA | 8 cut(s) | 527, 803, 954, 1109, 1326, 1384, 2231, 2284 |
| TspGWI | ACGGA | 2 cut(s) | 901, 1885 |
| TspRI | CASTG | 7 cut(s) | 734, 879, 1042, 1120, 1609, 1654, 2350 |
| VpaK11BI | GGWCC | 2 cut(s) | 1521, 2013 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2264 |
| XapI | RAATTY | 8 cut(s) | 17, 867, 1473, 1554, 1724, 1902, 2177, 2453 |
| XbaI | TCTAGA | 2 cut(s) | 1712, 2419 |
| XceI | RCATGY | 2 cut(s) | 1952, 2073 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 418, 648, 801 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2447 |
| XspI | CTAG | 8 cut(s) | 299, 443, 494, 1713, 2082, 2420, 2471, 2582 |
| ZrmI | AGTACT | 2 cut(s) | 1847, 2158 |
| Zsp2I | ATGCAT | 2 cut(s) | 1251, 1401 |