Rmu_co8507547.1_g000001

repressing transcription factor binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8507547.1
OG0001222
Physical Location & Seq
Reverse (-)
1 .. 3398
3398 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8507547.1_g000001.1.cds

Sequence Viewer

Length: 2224 bp
gtttttgatcatgaagatggttcagaaaagaggaagatcttctttccggatttgggagatgaactaacaactggaattgacactttaagaattactcaggactgggatgaggttacagagaattggcagcgacgtgggacttggatatttcttgagttgattgaacaatatgagcaagagaggtacattgctgtctctgtgaagcaagtttggtatgatgttcgattaaaagagggctttgagaaggtcaggcagtggacttctccaatgagatatctatgggaggagctggtgttggaggtcattgatgataacttaagcatcaccgcggatgaactttttcgggtgttagaagtgtcaggatgcttgtcaagaggattccaggtagggttcgagtcagctcaatgtgtcttagatgctgatatgaattctaaatcatataccacacactctcttgctattgtacctgttggcaacacattggatagtaatttgttagttgatcatgatgattttatgaagaatgcattggactgtagggctgggattgctgatgaacaaagtgaaggtttgtcgatcattgaaagggcctcccgacaaagcttcaatggaacttcttctgccaaatctgatattagcaatgatggaatctgtgttactaaatccaaaggcagaagaacagcaaattggctacctgtggaacttcataaagagtcttgccctagtgctgttgataagtacatgtgtaagggatggctgccttcaggggagttacaaacagctgttagaaagcatcttttatatttgggttggaaagtagagtatatgatagataagggcagaatgagataccggtacttgtcgcctcatggagaacccgaatactctctaattaaagtgtgcagtaacttgagaaagtcctcgaaagattcacaatttgcaatctctcaagattctcctcagtgtttgcatggttcagctgggcaacttcttgtcactgaagaaccacaagagattcagcatcctaattattgtcctcaacaggtagcgtctcctttttccaattccaagttacatcccaaggtatttatttacaaacccgaatattgccctcaagctgttgtggcatatgtagactctcccataaggggacccagaagtttgagagtaaaaacaatgcggtctaaagcaaagaagcacctctctgctgtggggtgggagttctactactcagaaataagatcatcaaatagcttgcgcttcaaatctcccaatggaaatgtatacaactcacttctggatgcctgcaaagtctgtatggatgaagaaaattctgaaagaagacctgctgaatgcaggtatgtcattgacgaagatgaggcccacttaattaagaaaaaaatattttctgtagcaaatagaaaatgcaaaaggaatagaatttgtagcttgttaaactgtggacctcacttgcttcacgaatgcccaaaggatcaatgtgctaaccctccaaagttgaaaaggcgaaaggcatctgcatcttcctctgggtttagaaatggttctggtgttagtcagccaactcgtgtgctcaggtcaagcaaacgagtccaggaagtggttactcctacttccacacaccagaatccccgcactgtcttatcttggttgatagacaataatgtggttttgccaagggaaaaagtgcattattgtagcagaaagggtggtccttcaatggcagaagggaaaataagtagagaggggatcaagtgcagctgttgccaaaaggtgtttactcttagctgctttgagagtcatgctggcttcaatgagactcatgctggctgcagtaaccacagacctgcttccaatatttttctggatgatggtaggtctctcttggattgccagatgcaaattatacttgaaagaaggaagaggacttgcagaacagaaccacgccataggatgaagggaaatcaagttcgaggcaagagtgattacatatgtactgtgtgtcactatggtggtgatttaatcttatgtgacgaatgtccgtcatcatttcacaagagttgcgttgggttgaaggatgttccagatggtgagtggttctgtccatcttgctgttgtggattatgtggccaaagaaaactcaaagaagacaaagaacctattatgcattctgattttctcacatgtggtcaatgcgagcacaaat
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0000122 GO:0000228 GO:0000785 GO:0000790 GO:0000976 GO:0000977 GO:0001012 GO:0001067 GO:0001085 GO:0001103 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003682 GO:0003690 GO:0003712 GO:0003714 GO:0003824 GO:0004003 GO:0004386 GO:0004407 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0008270 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0015630 GO:0016043 GO:0016462 GO:0016569 GO:0016570 GO:0016575 GO:0016581 GO:0016787 GO:0016810 GO:0016811 GO:0016817 GO:0016818 GO:0016887 GO:0017053 GO:0017111 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0030334 GO:0030336 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032879 GO:0032991 GO:0033558 GO:0035064 GO:0035601 GO:0036211 GO:0040012 GO:0040013 GO:0042393 GO:0042623 GO:0042826 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051270 GO:0051271 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070035 GO:0070491 GO:0070577 GO:0070603 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090545 GO:0090568 GO:0097159 GO:0098732 GO:0140030 GO:0140033 GO:0140034 GO:0140096 GO:0140097 GO:0140110 GO:1901363 GO:1901564 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1903756 GO:1903758 GO:1904949 GO:1990837 GO:2000112 GO:2000113 GO:2000145 GO:2000146 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Agenet Jas PHD

Protein Analysis

741

Amino Acids

84.2

Weight (kDa)

8.39

Isoelectric Point (pI)

50.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 1347, 1354, 1873
AccB7I CCANNNNNTGG 1 cut(s) 1618
AccI GTMKAC 2 cut(s) 1134, 1284
AccII CGCG 1 cut(s) 329
AccIII TCCGGA 1 cut(s) 46
AciI CCGC 4 cut(s) 327, 329, 1180, 1651
AclWI GGATC 2 cut(s) 1500, 1775
AcoI YGGCCR 1 cut(s) 2146
AcsI RAATTY 3 cut(s) 427, 1330, 1440
AcuI CTGAAG 2 cut(s) 747, 1020
AfaI GTAC 5 cut(s) 185, 465, 740, 857, 2014
AfiI CCNNNNNNNGG 3 cut(s) 53, 1148, 1618
AflII CTTAAG 1 cut(s) 316
AflIII ACRYGT 2 cut(s) 741, 2201
AgeI ACCGGT 1 cut(s) 852
AgsI TTSAA 9 cut(s) 164, 584, 607, 1264, 1519, 1737, 1831, 1931, 2092
AjiI CACGTC 1 cut(s) 134
AjnI CCWGG 2 cut(s) 381, 1611
AjuI GAANNNNNNNTTGG 4 cut(s) 512, 544, 670, 702
AleI CACNNNNGTG 1 cut(s) 2028
AloI GAACNNNNNNTCC 2 cut(s) 1971, 2003
Alw21I GWGCWC 2 cut(s) 1593, 2220
Alw26I GTCTC 4 cut(s) 199, 1056, 1829, 1902
AlwI GGATC 2 cut(s) 1500, 1775
Aor13HI TCCGGA 1 cut(s) 46
AoxI GGCC 3 cut(s) 588, 1380, 2146
ApeKI GCWGC 5 cut(s) 127, 757, 1776, 1806, 1848
ApoI RAATTY 3 cut(s) 427, 1330, 1440
AsiGI ACCGGT 1 cut(s) 852
Asp700I GAANNNNTTC 4 cut(s) 38, 339, 616, 1561
AspLEI GCGC 1 cut(s) 1260
AspS9I GGNCC 5 cut(s) 588, 1151, 1381, 1463, 1730
AsuHPI GGTGA 3 cut(s) 316, 2045, 2120
AvaII GGWCC 3 cut(s) 1151, 1463, 1730
BalI TGGCCA 1 cut(s) 2148
BauI CACGAG 1 cut(s) 1584
BbsI GAAGAC 2 cut(s) 1348, 2172
Bbv12I GWGCWC 2 cut(s) 1593, 2220
BbvI GCAGC 5 cut(s) 139, 744, 1788, 1793, 1835
BccI CCATC 6 cut(s) 11, 638, 747, 1883, 2099, 2131
BciT130I CCWGG 2 cut(s) 383, 1613
BclI TGATCA 2 cut(s) 7, 502
BcoDI GTCTC 4 cut(s) 199, 1056, 1829, 1902
BfaI CTAG 1 cut(s) 723
BfmI CTRYAG 3 cut(s) 535, 1410, 1849
BfrI CTTAAG 1 cut(s) 316
BfuAI ACCTGC 3 cut(s) 1347, 1354, 1873
BglII AGATCT 1 cut(s) 36
BisI GCNGC 5 cut(s) 128, 758, 1777, 1807, 1849
BlsI GCNGC 5 cut(s) 129, 759, 1778, 1808, 1850
Bme1390I CCNGG 2 cut(s) 383, 1613
Bme18I GGWCC 3 cut(s) 1151, 1463, 1730
BmgBI CACGTC 1 cut(s) 134
BmgT120I GGNCC 5 cut(s) 588, 1151, 1381, 1463, 1730
BmiI GGNNCC 2 cut(s) 1152, 1153
BmrFI CCNGG 2 cut(s) 383, 1613
BmrI ACTGGG 1 cut(s) 112
BmsI GCATC 9 cut(s) 330, 353, 406, 802, 1030, 1291, 1541, 1547, 1905
BmuI ACTGGG 1 cut(s) 112
BoxI GACNNNNGTC 1 cut(s) 2055
BpiI GAAGAC 2 cut(s) 1348, 2172
Bpu10I CCTNAGC 1 cut(s) 1592
BpuEI CTTGAG 4 cut(s) 173, 931, 933, 1098
BsaI GGTCTC 1 cut(s) 1902
BsaJI CCNNGG 3 cut(s) 327, 1080, 1694
BsaWI WCCGGW 2 cut(s) 46, 852
BsaXI ACNNNNNCTCC 2 cut(s) 278, 308
Bsc4I CCNNNNNNNGG 3 cut(s) 53, 1148, 1618
Bse118I RCCGGY 1 cut(s) 852
Bse1I ACTGG 2 cut(s) 76, 107
Bse3DI GCAATG 2 cut(s) 186, 646
BseAI TCCGGA 1 cut(s) 46
BseBI CCWGG 2 cut(s) 383, 1613
BseDI CCNNGG 3 cut(s) 327, 1080, 1694
BseLI CCNNNNNNNGG 3 cut(s) 53, 1148, 1618
BseMI GCAATG 2 cut(s) 186, 646
BseMII CTCAG 4 cut(s) 110, 974, 1245, 1606
BseNI ACTGG 2 cut(s) 76, 107
BseRI GAGGAG 2 cut(s) 299, 948
BseXI GCAGC 5 cut(s) 139, 744, 1788, 1793, 1835
BseYI CCCAGC 2 cut(s) 542, 980
BsgI GTGCAG 2 cut(s) 922, 1795
Bsh1236I CGCG 1 cut(s) 329
BshFI GGCC 3 cut(s) 590, 1382, 2148
BshTI ACCGGT 1 cut(s) 852
BsiHKAI GWGCWC 2 cut(s) 1593, 2220
BsiSI CCGG 2 cut(s) 47, 853
BslFI GGGAC 2 cut(s) 151, 1164
BslI CCNNNNNNNGG 3 cut(s) 53, 1148, 1618
BsmAI GTCTC 4 cut(s) 199, 1056, 1829, 1902
BsmBI CGTCTC 1 cut(s) 1056
BsmFI GGGAC 2 cut(s) 151, 1164
BsmI GAATGC 4 cut(s) 529, 1358, 1487, 2185
BsnI GGCC 3 cut(s) 590, 1382, 2148
Bso31I GGTCTC 1 cut(s) 1902
Bsp1286I GDGCHC 2 cut(s) 1593, 2220
Bsp13I TCCGGA 1 cut(s) 46
Bsp143I GATC 7 cut(s) 7, 36, 502, 576, 1241, 1492, 1767
BspACI CCGC 4 cut(s) 327, 329, 1180, 1651
BspANI GGCC 3 cut(s) 590, 1382, 2148
BspCNI CTCAG 4 cut(s) 109, 973, 1244, 1605
BspEI TCCGGA 1 cut(s) 46
BspFNI CGCG 1 cut(s) 329
BspHI TCATGA 2 cut(s) 10, 505
BspLI GGNNCC 2 cut(s) 1152, 1153
BspMAI CTGCAG 1 cut(s) 1853
BspMI ACCTGC 3 cut(s) 1347, 1354, 1873
BspPI GGATC 2 cut(s) 1500, 1775
BspTI CTTAAG 1 cut(s) 316
BspTNI GGTCTC 1 cut(s) 1902
BsrDI GCAATG 2 cut(s) 186, 646
BsrFI RCCGGY 1 cut(s) 852
BsrI ACTGG 2 cut(s) 76, 107
BssAI RCCGGY 1 cut(s) 852
BssECI CCNNGG 3 cut(s) 327, 1080, 1694
BssMI GATC 7 cut(s) 7, 36, 502, 576, 1241, 1492, 1767
BssNAI GTATAC 1 cut(s) 1285
BssSI CACGAG 1 cut(s) 1584
BssT1I CCWWGG 2 cut(s) 1080, 1694
Bst1107I GTATAC 1 cut(s) 1285
Bst2BI CACGAG 1 cut(s) 1584
Bst2UI CCWGG 2 cut(s) 383, 1613
Bst4CI ACNGT 4 cut(s) 536, 1460, 1657, 2017
Bst6I CTCTTC 1 cut(s) 1934
BstAFI CTTAAG 1 cut(s) 316
BstAPI GCANNNNNTGC 1 cut(s) 1782
BstC8I GCNNGC 5 cut(s) 1256, 1306, 1825, 1846, 2216
BstDEI CTNAG 6 cut(s) 96, 412, 960, 1231, 1592, 1802
BstDSI CCRYGG 1 cut(s) 327
BstFNI CGCG 1 cut(s) 329
BstHHI GCGC 1 cut(s) 1260
BstKTI GATC 7 cut(s) 10, 39, 505, 579, 1244, 1495, 1770
BstMAI GTCTC 4 cut(s) 199, 1056, 1829, 1902
BstMBI GATC 7 cut(s) 7, 36, 502, 576, 1241, 1492, 1767
BstMWI GCNNNNNNNGC 3 cut(s) 548, 1124, 1782
BstNI CCWGG 2 cut(s) 383, 1613
BstNSI RCATGY 2 cut(s) 745, 2205
BstPAI GACNNNNGTC 1 cut(s) 2055
BstSCI CCNGG 2 cut(s) 381, 1611
BstSFI CTRYAG 3 cut(s) 535, 1410, 1849
BstUI CGCG 1 cut(s) 329
BstV1I GCAGC 5 cut(s) 139, 744, 1788, 1793, 1835
BstV2I GAAGAC 2 cut(s) 1348, 2172
BstX2I RGATCY 1 cut(s) 36
BstYI RGATCY 1 cut(s) 36
BstZ17I GTATAC 1 cut(s) 1285
BsuRI GGCC 3 cut(s) 590, 1382, 2148
BtgI CCRYGG 1 cut(s) 327
BtrI CACGTC 1 cut(s) 134
BtsI GCAGTG 1 cut(s) 260
BtsIMutI CAGTG 4 cut(s) 260, 968, 996, 1653
BveI ACCTGC 3 cut(s) 1347, 1354, 1873
Cac8I GCNNGC 5 cut(s) 1256, 1306, 1825, 1846, 2216
CciI TCATGA 2 cut(s) 10, 505
CfoI GCGC 1 cut(s) 1260
Cfr10I RCCGGY 1 cut(s) 852
Cfr13I GGNCC 5 cut(s) 588, 1151, 1381, 1463, 1730
Cfr42I CCGCGG 1 cut(s) 330
CseI GACGC 1 cut(s) 1038
Csp6I GTAC 5 cut(s) 184, 464, 739, 856, 2013
CspAI ACCGGT 1 cut(s) 852
CviAII CATG 8 cut(s) 11, 506, 742, 869, 971, 1820, 1841, 2202
CviQI GTAC 5 cut(s) 184, 464, 739, 856, 2013
DdeI CTNAG 6 cut(s) 96, 412, 960, 1231, 1592, 1802
DpnI GATC 7 cut(s) 9, 38, 504, 578, 1243, 1494, 1769
DpnII GATC 7 cut(s) 7, 36, 502, 576, 1241, 1492, 1767
EaeI YGGCCR 1 cut(s) 2146
Eam1104I CTCTTC 1 cut(s) 1934
EarI CTCTTC 1 cut(s) 1934
Eco130I CCWWGG 2 cut(s) 1080, 1694
Eco31I GGTCTC 1 cut(s) 1902
Eco32I GATATC 1 cut(s) 275
Eco47I GGWCC 3 cut(s) 1151, 1463, 1730
Eco57I CTGAAG 2 cut(s) 747, 1020
EcoO109I RGGNCCY 2 cut(s) 588, 1151
EcoRI GAATTC 1 cut(s) 427
EcoRII CCWGG 2 cut(s) 381, 1611
EcoRV GATATC 1 cut(s) 275
EcoT14I CCWWGG 2 cut(s) 1080, 1694
EcoT22I ATGCAT 2 cut(s) 529, 2187
ErhI CCWWGG 2 cut(s) 1080, 1694
Esp3I CGTCTC 1 cut(s) 1056
FaeI CATG 8 cut(s) 14, 509, 745, 872, 974, 1823, 1844, 2205
FalI AAGNNNNNCTT 2 cut(s) 26, 58
FaqI GGGAC 2 cut(s) 151, 1164
FatI CATG 8 cut(s) 10, 505, 741, 868, 970, 1819, 1840, 2201
FauI CCCGC 1 cut(s) 1658
FauNDI CATATG 2 cut(s) 1129, 2009
FbaI TGATCA 2 cut(s) 7, 502
FblI GTMKAC 2 cut(s) 1134, 1284
Fnu4HI GCNGC 5 cut(s) 128, 758, 1777, 1807, 1849
Fsp4HI GCNGC 5 cut(s) 128, 758, 1777, 1807, 1849
FspBI CTAG 1 cut(s) 723
GlaI GCGC 1 cut(s) 1259
GluI GCNGC 5 cut(s) 128, 758, 1777, 1807, 1849
GsaI CCCAGC 2 cut(s) 546, 984
HaeIII GGCC 3 cut(s) 590, 1382, 2148
HapII CCGG 2 cut(s) 47, 853
HgaI GACGC 1 cut(s) 1038
HhaI GCGC 1 cut(s) 1260
Hin1II CATG 8 cut(s) 14, 509, 745, 872, 974, 1823, 1844, 2205
Hin6I GCGC 1 cut(s) 1258
HinP1I GCGC 1 cut(s) 1258
HindIII AAGCTT 1 cut(s) 601
HpaII CCGG 2 cut(s) 47, 853
HphI GGTGA 3 cut(s) 316, 2045, 2120
Hpy166II GTNNAC 5 cut(s) 258, 1135, 1285, 1463, 1797
Hpy188I TCNGA 5 cut(s) 25, 631, 1234, 1336, 2191
Hpy8I GTNNAC 5 cut(s) 258, 1135, 1285, 1463, 1797
Hpy99I CGWCG 1 cut(s) 135
HpyAV CCTTC 8 cut(s) 238, 560, 771, 1739, 1743, 1929, 1969, 2086
HpyCH4III ACNGT 4 cut(s) 536, 1460, 1657, 2017
HpyCH4IV ACGT 1 cut(s) 133
HpyF10VI GCNNNNNNNGC 3 cut(s) 548, 1124, 1782
HpyF3I CTNAG 6 cut(s) 96, 412, 960, 1231, 1592, 1802
HpySE526I ACGT 1 cut(s) 133
Hsp92II CATG 8 cut(s) 14, 509, 745, 872, 974, 1823, 1844, 2205
HspAI GCGC 1 cut(s) 1258
KflI GGGWCCC 1 cut(s) 1151
Kpn2I TCCGGA 1 cut(s) 46
Ksp22I TGATCA 2 cut(s) 7, 502
KspI CCGCGG 1 cut(s) 330
Kzo9I GATC 7 cut(s) 7, 36, 502, 576, 1241, 1492, 1767
LmnI GCTCC 1 cut(s) 286
Lsp1109I GCAGC 5 cut(s) 139, 744, 1788, 1793, 1835
LweI GCATC 9 cut(s) 330, 353, 406, 802, 1030, 1291, 1541, 1547, 1905
MaeI CTAG 1 cut(s) 723
MaeII ACGT 1 cut(s) 133
MalI GATC 7 cut(s) 9, 38, 504, 578, 1243, 1494, 1769
MboI GATC 7 cut(s) 7, 36, 502, 576, 1241, 1492, 1767
MflI RGATCY 1 cut(s) 36
MhlI GDGCHC 2 cut(s) 1593, 2220
MlsI TGGCCA 1 cut(s) 2148
MluNI TGGCCA 1 cut(s) 2148
MlyI GAGTC 6 cut(s) 404, 722, 1130, 1617, 1825, 1831
MmeI TCCRAC 2 cut(s) 276, 791
Mox20I TGGCCA 1 cut(s) 2148
Mph1103I ATGCAT 2 cut(s) 529, 2187
MroI TCCGGA 1 cut(s) 46
MroXI GAANNNNTTC 4 cut(s) 38, 339, 616, 1561
MscI TGGCCA 1 cut(s) 2148
MseI TTAA 8 cut(s) 86, 227, 317, 894, 1388, 1392, 1454, 2039
MslI CAYNNNNRTG 2 cut(s) 15, 2028
Msp20I TGGCCA 1 cut(s) 2148
MspA1I CMGCKG 4 cut(s) 329, 782, 980, 1779
MspCI CTTAAG 1 cut(s) 316
MspI CCGG 2 cut(s) 47, 853
MspR9I CCNGG 2 cut(s) 383, 1613
Mva1269I GAATGC 4 cut(s) 529, 1358, 1487, 2185
MvaI CCWGG 2 cut(s) 383, 1613
MvnI CGCG 1 cut(s) 329
MwoI GCNNNNNNNGC 3 cut(s) 548, 1124, 1782
NdeI CATATG 2 cut(s) 1129, 2009
NdeII GATC 7 cut(s) 7, 36, 502, 576, 1241, 1492, 1767
NlaIII CATG 8 cut(s) 14, 509, 745, 872, 974, 1823, 1844, 2205
NlaIV GGNNCC 2 cut(s) 1152, 1153
NmuCI GTSAC 3 cut(s) 994, 2021, 2048
NsiI ATGCAT 2 cut(s) 529, 2187
NspI RCATGY 2 cut(s) 745, 2205
OliI CACNNNNGTG 1 cut(s) 2028
PacI TTAATTAA 1 cut(s) 1392
PagI TCATGA 2 cut(s) 10, 505
PciI ACATGT 2 cut(s) 741, 2201
PctI GAATGC 4 cut(s) 529, 1358, 1487, 2185
PdmI GAANNNNTTC 4 cut(s) 38, 339, 616, 1561
PfeI GAWTC 6 cut(s) 378, 648, 929, 953, 1015, 1645
PflMI CCANNNNNTGG 1 cut(s) 1618
PfoI TCCNGGA 1 cut(s) 1611
PinAI ACCGGT 1 cut(s) 852
PkrI GCNGC 5 cut(s) 129, 759, 1778, 1808, 1850
PleI GAGTC 6 cut(s) 403, 721, 1130, 1616, 1824, 1831
PpsI GAGTC 6 cut(s) 403, 721, 1130, 1616, 1824, 1831
PpuMI RGGWCCY 1 cut(s) 1151
PscI ACATGT 2 cut(s) 741, 2201
PshAI GACNNNNGTC 1 cut(s) 2055
Psp5II RGGWCCY 1 cut(s) 1151
Psp6I CCWGG 2 cut(s) 381, 1611
PspFI CCCAGC 2 cut(s) 542, 980
PspGI CCWGG 2 cut(s) 381, 1611
PspN4I GGNNCC 2 cut(s) 1152, 1153
PspPI GGNCC 5 cut(s) 588, 1151, 1381, 1463, 1730
PspPPI RGGWCCY 1 cut(s) 1151
PstI CTGCAG 1 cut(s) 1853
PsuI RGATCY 1 cut(s) 36
PvuII CAGCTG 3 cut(s) 782, 980, 1779
RsaI GTAC 5 cut(s) 185, 465, 740, 857, 2014
RsaNI GTAC 5 cut(s) 184, 464, 739, 856, 2013
RseI CAYNNNNRTG 2 cut(s) 15, 2028
SacII CCGCGG 1 cut(s) 330
SaqAI TTAA 8 cut(s) 86, 227, 317, 894, 1388, 1392, 1454, 2039
SatI GCNGC 5 cut(s) 128, 758, 1777, 1807, 1849
Sau3AI GATC 7 cut(s) 7, 36, 502, 576, 1241, 1492, 1767
Sau96I GGNCC 5 cut(s) 588, 1151, 1381, 1463, 1730
SchI GAGTC 6 cut(s) 404, 722, 1130, 1617, 1825, 1831
ScrFI CCNGG 2 cut(s) 383, 1613
SduI GDGCHC 2 cut(s) 1593, 2220
SfaNI GCATC 9 cut(s) 330, 353, 406, 802, 1030, 1291, 1541, 1547, 1905
SfcI CTRYAG 3 cut(s) 535, 1410, 1849
Sfr303I CCGCGG 1 cut(s) 330
SgrBI CCGCGG 1 cut(s) 330
SinI GGWCC 3 cut(s) 1151, 1463, 1730
SmiMI CAYNNNNRTG 2 cut(s) 15, 2028
SmlI CTYRAG 5 cut(s) 152, 316, 910, 948, 1113
SmoI CTYRAG 5 cut(s) 152, 316, 910, 948, 1113
SsiI CCGC 4 cut(s) 327, 329, 1180, 1651
SspI AATATT 3 cut(s) 1106, 1404, 1876
SspMI CTAG 1 cut(s) 723
StyD4I CCNGG 2 cut(s) 381, 1611
StyI CCWWGG 2 cut(s) 1080, 1694
TaaI ACNGT 4 cut(s) 536, 1460, 1657, 2017
TaiI ACGT 1 cut(s) 136
TaqI TCGA 5 cut(s) 223, 393, 575, 923, 1990
TatI WGTACW 2 cut(s) 738, 2012
TfiI GAWTC 6 cut(s) 378, 648, 929, 953, 1015, 1645
Tru1I TTAA 8 cut(s) 86, 227, 317, 894, 1388, 1392, 1454, 2039
Tru9I TTAA 8 cut(s) 86, 227, 317, 894, 1388, 1392, 1454, 2039
TscAI CASTG 4 cut(s) 260, 968, 1003, 1660
TseFI GTSAC 3 cut(s) 994, 2021, 2048
TseI GCWGC 5 cut(s) 127, 757, 1776, 1806, 1848
Tsp45I GTSAC 3 cut(s) 994, 2021, 2048
TspDTI ATGAA 9 cut(s) 27, 75, 348, 440, 533, 570, 695, 1338, 1988
TspGWI ACGGA 1 cut(s) 2049
TspRI CASTG 4 cut(s) 260, 968, 1003, 1660
Van91I CCANNNNNTGG 1 cut(s) 1618
Vha464I CTTAAG 1 cut(s) 316
VpaK11BI GGWCC 3 cut(s) 1151, 1463, 1730
XapI RAATTY 3 cut(s) 427, 1330, 1440
XceI RCATGY 2 cut(s) 745, 2205
XcmI CCANNNNNNNNNTGG 2 cut(s) 1879, 2109
XmiI GTMKAC 2 cut(s) 1134, 1284
XmnI GAANNNNTTC 4 cut(s) 38, 339, 616, 1561
XspI CTAG 1 cut(s) 723
Zsp2I ATGCAT 2 cut(s) 529, 2187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.