DNA repair protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0066831 |
| rosa_laevigata | RLG00000001037 RLG00000002992 RLG00000009041 RLG00000013095 RLG00000014399 RLG00000025318 RLG00000032727 |
| rosa_multiflora | Rmu_sc0007876.1_g000001 Rmu_sc0009833.1_g000011 Rmu_sc0030579.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00133360 Rroxscaffold_2G00137040 Rroxscaffold_5G00332840 Rroxscaffold_7G00190740 |
| rosa_samantha | Rh2BG194400 Rh2BG453200 Rh2DG329000 Rh2DG463400 Rh3AG210000 Rh3AG316800 Rh3CG342100 Rh3CG356100 Rh4AG138700 Rh5AG319900 Rh6AG116600 Rh7AG447000 Rh7AG447100 |
| rosa_wichuraiana | Rw0G020530 Rw3G028320 Rw5G029920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 386 |
| AccII | CGCG | 1 cut(s) | 45 |
| AciI | CCGC | 2 cut(s) | 331, 423 |
| AclWI | GGATC | 2 cut(s) | 136, 443 |
| AcsI | RAATTY | 3 cut(s) | 78, 277, 375 |
| AfaI | GTAC | 4 cut(s) | 214, 430, 435, 469 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 294, 386, 458 |
| AflIII | ACRYGT | 1 cut(s) | 43 |
| AgsI | TTSAA | 2 cut(s) | 337, 614 |
| AhlI | ACTAGT | 1 cut(s) | 436 |
| AjiI | CACGTC | 1 cut(s) | 678 |
| AjnI | CCWGG | 3 cut(s) | 32, 37, 646 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 642, 674 |
| AluBI | AGCT | 4 cut(s) | 95, 500, 514, 593 |
| AluI | AGCT | 4 cut(s) | 95, 500, 514, 593 |
| Alw26I | GTCTC | 3 cut(s) | 228, 547, 582 |
| AlwI | GGATC | 2 cut(s) | 136, 443 |
| AoxI | GGCC | 1 cut(s) | 35 |
| ApeKI | GCWGC | 3 cut(s) | 95, 488, 688 |
| ApoI | RAATTY | 3 cut(s) | 78, 277, 375 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 78 |
| AspLEI | GCGC | 1 cut(s) | 185 |
| AspS9I | GGNCC | 1 cut(s) | 125 |
| AsuHPI | GGTGA | 3 cut(s) | 304, 560, 676 |
| AvaII | GGWCC | 1 cut(s) | 125 |
| BbvI | GCAGC | 3 cut(s) | 82, 475, 675 |
| BciT130I | CCWGG | 3 cut(s) | 34, 39, 648 |
| BcoDI | GTCTC | 3 cut(s) | 228, 547, 582 |
| BcuI | ACTAGT | 1 cut(s) | 436 |
| BfaI | CTAG | 3 cut(s) | 437, 453, 708 |
| BfmI | CTRYAG | 1 cut(s) | 96 |
| BisI | GCNGC | 3 cut(s) | 96, 489, 689 |
| BlsI | GCNGC | 3 cut(s) | 97, 490, 690 |
| BmcAI | AGTACT | 1 cut(s) | 214 |
| Bme1390I | CCNGG | 3 cut(s) | 34, 39, 648 |
| Bme18I | GGWCC | 1 cut(s) | 125 |
| BmgBI | CACGTC | 1 cut(s) | 678 |
| BmgT120I | GGNCC | 1 cut(s) | 125 |
| BmiI | GGNNCC | 4 cut(s) | 126, 127, 391, 585 |
| BmrFI | CCNGG | 3 cut(s) | 34, 39, 648 |
| BmrI | ACTGGG | 1 cut(s) | 358 |
| BmsI | GCATC | 1 cut(s) | 533 |
| BmuI | ACTGGG | 1 cut(s) | 358 |
| BpmI | CTGGAG | 2 cut(s) | 39, 669 |
| BpuEI | CTTGAG | 1 cut(s) | 573 |
| BsaI | GGTCTC | 1 cut(s) | 582 |
| BsaJI | CCNNGG | 1 cut(s) | 288 |
| BsaWI | WCCGGW | 1 cut(s) | 545 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 642, 672 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 294, 386, 458 |
| Bse1I | ACTGG | 2 cut(s) | 264, 353 |
| Bse3DI | GCAATG | 1 cut(s) | 380 |
| BseBI | CCWGG | 3 cut(s) | 34, 39, 648 |
| BseDI | CCNNGG | 1 cut(s) | 288 |
| BseGI | GGATG | 1 cut(s) | 524 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 294, 386, 458 |
| BseMI | GCAATG | 1 cut(s) | 380 |
| BseMII | CTCAG | 3 cut(s) | 148, 189, 239 |
| BseNI | ACTGG | 2 cut(s) | 264, 353 |
| BseRI | GAGGAG | 1 cut(s) | 576 |
| BseXI | GCAGC | 3 cut(s) | 82, 475, 675 |
| BseYI | CCCAGC | 1 cut(s) | 514 |
| BsgI | GTGCAG | 1 cut(s) | 474 |
| Bsh1236I | CGCG | 1 cut(s) | 45 |
| BshFI | GGCC | 1 cut(s) | 37 |
| BsiSI | CCGG | 1 cut(s) | 546 |
| BslFI | GGGAC | 1 cut(s) | 138 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 294, 386, 458 |
| BsmAI | GTCTC | 3 cut(s) | 228, 547, 582 |
| BsmFI | GGGAC | 1 cut(s) | 138 |
| BsmI | GAATGC | 2 cut(s) | 256, 677 |
| BsnI | GGCC | 1 cut(s) | 37 |
| Bso31I | GGTCTC | 1 cut(s) | 582 |
| Bsp143I | GATC | 3 cut(s) | 141, 367, 448 |
| Bsp19I | CCATGG | 1 cut(s) | 288 |
| BspACI | CCGC | 2 cut(s) | 331, 423 |
| BspANI | GGCC | 1 cut(s) | 37 |
| BspCNI | CTCAG | 3 cut(s) | 147, 190, 238 |
| BspFNI | CGCG | 1 cut(s) | 45 |
| BspLI | GGNNCC | 4 cut(s) | 126, 127, 391, 585 |
| BspMAI | CTGCAG | 1 cut(s) | 100 |
| BspPI | GGATC | 2 cut(s) | 136, 443 |
| BspTNI | GGTCTC | 1 cut(s) | 582 |
| BsrDI | GCAATG | 1 cut(s) | 380 |
| BsrI | ACTGG | 2 cut(s) | 264, 353 |
| BssECI | CCNNGG | 1 cut(s) | 288 |
| BssMI | GATC | 3 cut(s) | 141, 367, 448 |
| BssT1I | CCWWGG | 1 cut(s) | 288 |
| Bst2UI | CCWGG | 3 cut(s) | 34, 39, 648 |
| Bst4CI | ACNGT | 3 cut(s) | 415, 433, 619 |
| Bst6I | CTCTTC | 2 cut(s) | 546, 695 |
| BstC8I | GCNNGC | 2 cut(s) | 93, 460 |
| BstDEI | CTNAG | 3 cut(s) | 134, 198, 225 |
| BstDSI | CCRYGG | 1 cut(s) | 288 |
| BstF5I | GGATG | 1 cut(s) | 524 |
| BstFNI | CGCG | 1 cut(s) | 45 |
| BstHHI | GCGC | 1 cut(s) | 185 |
| BstKTI | GATC | 3 cut(s) | 144, 370, 451 |
| BstMAI | GTCTC | 3 cut(s) | 228, 547, 582 |
| BstMBI | GATC | 3 cut(s) | 141, 367, 448 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 497, 590, 599 |
| BstNI | CCWGG | 3 cut(s) | 34, 39, 648 |
| BstSCI | CCNGG | 3 cut(s) | 32, 37, 646 |
| BstSFI | CTRYAG | 1 cut(s) | 96 |
| BstUI | CGCG | 1 cut(s) | 45 |
| BstV1I | GCAGC | 3 cut(s) | 82, 475, 675 |
| BstX2I | RGATCY | 1 cut(s) | 141 |
| BstYI | RGATCY | 1 cut(s) | 141 |
| BsuRI | GGCC | 1 cut(s) | 37 |
| BtgI | CCRYGG | 1 cut(s) | 288 |
| BtgZI | GCGATG | 1 cut(s) | 219 |
| BtrI | CACGTC | 1 cut(s) | 678 |
| BtsCI | GGATG | 1 cut(s) | 524 |
| BtsI | GCAGTG | 1 cut(s) | 451 |
| BtsIMutI | CAGTG | 1 cut(s) | 451 |
| Cac8I | GCNNGC | 2 cut(s) | 93, 460 |
| CfoI | GCGC | 1 cut(s) | 185 |
| Cfr13I | GGNCC | 1 cut(s) | 125 |
| CseI | GACGC | 1 cut(s) | 51 |
| Csp6I | GTAC | 4 cut(s) | 213, 429, 434, 468 |
| CviAII | CATG | 3 cut(s) | 289, 386, 509 |
| CviQI | GTAC | 4 cut(s) | 213, 429, 434, 468 |
| DdeI | CTNAG | 3 cut(s) | 134, 198, 225 |
| DpnI | GATC | 3 cut(s) | 143, 369, 450 |
| DpnII | GATC | 3 cut(s) | 141, 367, 448 |
| DraI | TTTAAA | 2 cut(s) | 537, 628 |
| Eam1104I | CTCTTC | 2 cut(s) | 546, 695 |
| EarI | CTCTTC | 2 cut(s) | 546, 695 |
| Eco130I | CCWWGG | 1 cut(s) | 288 |
| Eco31I | GGTCTC | 1 cut(s) | 582 |
| Eco47I | GGWCC | 1 cut(s) | 125 |
| EcoO109I | RGGNCCY | 1 cut(s) | 125 |
| EcoRI | GAATTC | 1 cut(s) | 375 |
| EcoRII | CCWGG | 3 cut(s) | 32, 37, 646 |
| EcoT14I | CCWWGG | 1 cut(s) | 288 |
| ErhI | CCWWGG | 1 cut(s) | 288 |
| FaeI | CATG | 3 cut(s) | 292, 389, 512 |
| FaiI | YATR | 5 cut(s) | 290, 387, 497, 510, 560 |
| FaqI | GGGAC | 1 cut(s) | 138 |
| FatI | CATG | 3 cut(s) | 288, 385, 508 |
| Fnu4HI | GCNGC | 3 cut(s) | 96, 489, 689 |
| FokI | GGATG | 1 cut(s) | 511 |
| Fsp4HI | GCNGC | 3 cut(s) | 96, 489, 689 |
| FspBI | CTAG | 3 cut(s) | 437, 453, 708 |
| GlaI | GCGC | 1 cut(s) | 184 |
| GluI | GCNGC | 3 cut(s) | 96, 489, 689 |
| GsaI | CCCAGC | 1 cut(s) | 518 |
| GsuI | CTGGAG | 2 cut(s) | 39, 669 |
| HaeIII | GGCC | 1 cut(s) | 37 |
| HapII | CCGG | 1 cut(s) | 546 |
| HgaI | GACGC | 1 cut(s) | 51 |
| HhaI | GCGC | 1 cut(s) | 185 |
| Hin1II | CATG | 3 cut(s) | 292, 389, 512 |
| Hin6I | GCGC | 1 cut(s) | 183 |
| HinP1I | GCGC | 1 cut(s) | 183 |
| HinfI | GANTC | 2 cut(s) | 192, 605 |
| HpaII | CCGG | 1 cut(s) | 546 |
| HphI | GGTGA | 3 cut(s) | 304, 560, 676 |
| Hpy166II | GTNNAC | 2 cut(s) | 346, 470 |
| Hpy188I | TCNGA | 4 cut(s) | 178, 199, 228, 715 |
| Hpy188III | TCNNGA | 2 cut(s) | 123, 481 |
| Hpy8I | GTNNAC | 2 cut(s) | 346, 470 |
| HpyAV | CCTTC | 4 cut(s) | 48, 53, 310, 661 |
| HpyCH4III | ACNGT | 3 cut(s) | 415, 433, 619 |
| HpyCH4IV | ACGT | 1 cut(s) | 677 |
| HpyCH4V | TGCA | 5 cut(s) | 98, 254, 385, 491, 675 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 497, 590, 599 |
| HpyF3I | CTNAG | 3 cut(s) | 134, 198, 225 |
| HpySE526I | ACGT | 1 cut(s) | 677 |
| Hsp92II | CATG | 3 cut(s) | 292, 389, 512 |
| HspAI | GCGC | 1 cut(s) | 183 |
| KflI | GGGWCCC | 1 cut(s) | 125 |
| Kzo9I | GATC | 3 cut(s) | 141, 367, 448 |
| LmnI | GCTCC | 1 cut(s) | 589 |
| Lsp1109I | GCAGC | 3 cut(s) | 82, 475, 675 |
| LweI | GCATC | 1 cut(s) | 533 |
| MaeI | CTAG | 3 cut(s) | 437, 453, 708 |
| MaeII | ACGT | 1 cut(s) | 677 |
| MalI | GATC | 3 cut(s) | 143, 369, 450 |
| MboI | GATC | 3 cut(s) | 141, 367, 448 |
| MboII | GAAGA | 6 cut(s) | 86, 111, 259, 275, 563, 712 |
| MflI | RGATCY | 1 cut(s) | 141 |
| MluCI | AATT | 4 cut(s) | 78, 277, 375, 597 |
| MluI | ACGCGT | 1 cut(s) | 43 |
| MlyI | GAGTC | 1 cut(s) | 186 |
| MmeI | TCCRAC | 2 cut(s) | 51, 341 |
| MnlI | CCTC | 8 cut(s) | 14, 155, 288, 547, 559, 597, 644, 696 |
| MroXI | GAANNNNTTC | 1 cut(s) | 78 |
| MseI | TTAA | 3 cut(s) | 321, 536, 627 |
| MspI | CCGG | 1 cut(s) | 546 |
| MspR9I | CCNGG | 3 cut(s) | 34, 39, 648 |
| Mva1269I | GAATGC | 2 cut(s) | 256, 677 |
| MvaI | CCWGG | 3 cut(s) | 34, 39, 648 |
| MvnI | CGCG | 1 cut(s) | 45 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 497, 590, 599 |
| NcoI | CCATGG | 1 cut(s) | 288 |
| NdeII | GATC | 3 cut(s) | 141, 367, 448 |
| NlaIII | CATG | 3 cut(s) | 292, 389, 512 |
| NlaIV | GGNNCC | 4 cut(s) | 126, 127, 391, 585 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 49, 88 |
| PctI | GAATGC | 2 cut(s) | 256, 677 |
| PdmI | GAANNNNTTC | 1 cut(s) | 78 |
| PfeI | GAWTC | 1 cut(s) | 605 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 386 |
| PfoI | TCCNGGA | 1 cut(s) | 646 |
| PkrI | GCNGC | 3 cut(s) | 97, 490, 690 |
| PleI | GAGTC | 1 cut(s) | 186 |
| PpsI | GAGTC | 1 cut(s) | 186 |
| PpuMI | RGGWCCY | 1 cut(s) | 125 |
| Psp5II | RGGWCCY | 1 cut(s) | 125 |
| Psp6I | CCWGG | 3 cut(s) | 32, 37, 646 |
| PspFI | CCCAGC | 1 cut(s) | 514 |
| PspGI | CCWGG | 3 cut(s) | 32, 37, 646 |
| PspN4I | GGNNCC | 4 cut(s) | 126, 127, 391, 585 |
| PspPI | GGNCC | 1 cut(s) | 125 |
| PspPPI | RGGWCCY | 1 cut(s) | 125 |
| PstI | CTGCAG | 1 cut(s) | 100 |
| PsuI | RGATCY | 1 cut(s) | 141 |
| RsaI | GTAC | 4 cut(s) | 214, 430, 435, 469 |
| RsaNI | GTAC | 4 cut(s) | 213, 429, 434, 468 |
| SaqAI | TTAA | 3 cut(s) | 321, 536, 627 |
| SatI | GCNGC | 3 cut(s) | 96, 489, 689 |
| Sau3AI | GATC | 3 cut(s) | 141, 367, 448 |
| Sau96I | GGNCC | 1 cut(s) | 125 |
| ScaI | AGTACT | 1 cut(s) | 214 |
| SchI | GAGTC | 1 cut(s) | 186 |
| ScrFI | CCNGG | 3 cut(s) | 34, 39, 648 |
| SfaNI | GCATC | 1 cut(s) | 533 |
| SfcI | CTRYAG | 1 cut(s) | 96 |
| SinI | GGWCC | 1 cut(s) | 125 |
| SmlI | CTYRAG | 1 cut(s) | 588 |
| SmoI | CTYRAG | 1 cut(s) | 588 |
| SpeI | ACTAGT | 1 cut(s) | 436 |
| Sse9I | AATT | 4 cut(s) | 78, 277, 375, 597 |
| SsiI | CCGC | 2 cut(s) | 331, 423 |
| SspMI | CTAG | 3 cut(s) | 437, 453, 708 |
| StyD4I | CCNGG | 3 cut(s) | 32, 37, 646 |
| StyI | CCWWGG | 1 cut(s) | 288 |
| TaaI | ACNGT | 3 cut(s) | 415, 433, 619 |
| TaiI | ACGT | 1 cut(s) | 680 |
| TaqI | TCGA | 2 cut(s) | 7, 190 |
| TasI | AATT | 4 cut(s) | 78, 277, 375, 597 |
| TatI | WGTACW | 3 cut(s) | 212, 433, 467 |
| TfiI | GAWTC | 1 cut(s) | 605 |
| Tru1I | TTAA | 3 cut(s) | 321, 536, 627 |
| Tru9I | TTAA | 3 cut(s) | 321, 536, 627 |
| TscAI | CASTG | 1 cut(s) | 451 |
| TseI | GCWGC | 3 cut(s) | 95, 488, 688 |
| TspDTI | ATGAA | 2 cut(s) | 417, 611 |
| TspRI | CASTG | 1 cut(s) | 451 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 386 |
| VpaK11BI | GGWCC | 1 cut(s) | 125 |
| XapI | RAATTY | 3 cut(s) | 78, 277, 375 |
| XmnI | GAANNNNTTC | 1 cut(s) | 78 |
| XspI | CTAG | 3 cut(s) | 437, 453, 708 |
| ZrmI | AGTACT | 1 cut(s) | 214 |