No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0066831 |
| rosa_laevigata | RLG00000001037 RLG00000002992 RLG00000009041 RLG00000013095 RLG00000014399 RLG00000025318 RLG00000032727 |
| rosa_multiflora | Rmu_sc0007876.1_g000001 Rmu_sc0009833.1_g000011 Rmu_sc0030579.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00133360 Rroxscaffold_2G00137040 Rroxscaffold_5G00332840 Rroxscaffold_7G00190740 |
| rosa_samantha | Rh2BG194400 Rh2BG453200 Rh2DG329000 Rh2DG463400 Rh3AG210000 Rh3AG316800 Rh3CG342100 Rh3CG356100 Rh4AG138700 Rh5AG319900 Rh6AG116600 Rh7AG447000 Rh7AG447100 |
| rosa_wichuraiana | Rw0G020530 Rw3G028320 Rw5G029920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 79 |
| AccI | GTMKAC | 1 cut(s) | 205 |
| AcoI | YGGCCR | 1 cut(s) | 180 |
| AgsI | TTSAA | 4 cut(s) | 70, 103, 128, 137 |
| AjnI | CCWGG | 1 cut(s) | 197 |
| AoxI | GGCC | 2 cut(s) | 180, 281 |
| ApeKI | GCWGC | 1 cut(s) | 29 |
| AsuHPI | GGTGA | 2 cut(s) | 247, 262 |
| BanI | GGYRCC | 1 cut(s) | 79 |
| BauI | CACGAG | 1 cut(s) | 209 |
| BbvI | GCAGC | 1 cut(s) | 41 |
| BceAI | ACGGC | 1 cut(s) | 286 |
| BciT130I | CCWGG | 1 cut(s) | 199 |
| BisI | GCNGC | 1 cut(s) | 30 |
| BlsI | GCNGC | 1 cut(s) | 31 |
| Bme1390I | CCNGG | 1 cut(s) | 199 |
| BmiI | GGNNCC | 1 cut(s) | 81 |
| BmrFI | CCNGG | 1 cut(s) | 199 |
| Bsa29I | ATCGAT | 1 cut(s) | 15 |
| BseBI | CCWGG | 1 cut(s) | 199 |
| BseCI | ATCGAT | 1 cut(s) | 15 |
| BseMII | CTCAG | 1 cut(s) | 33 |
| BseXI | GCAGC | 1 cut(s) | 41 |
| BshFI | GGCC | 2 cut(s) | 182, 283 |
| BshNI | GGYRCC | 1 cut(s) | 79 |
| BshVI | ATCGAT | 1 cut(s) | 15 |
| BsiSI | CCGG | 1 cut(s) | 183 |
| BsnI | GGCC | 2 cut(s) | 182, 283 |
| BspANI | GGCC | 2 cut(s) | 182, 283 |
| BspCNI | CTCAG | 1 cut(s) | 34 |
| BspDI | ATCGAT | 1 cut(s) | 15 |
| BspLI | GGNNCC | 1 cut(s) | 81 |
| BspT107I | GGYRCC | 1 cut(s) | 79 |
| BssSI | CACGAG | 1 cut(s) | 209 |
| Bst2BI | CACGAG | 1 cut(s) | 209 |
| Bst2UI | CCWGG | 1 cut(s) | 199 |
| Bst4CI | ACNGT | 1 cut(s) | 120 |
| BstDEI | CTNAG | 1 cut(s) | 42 |
| BstNI | CCWGG | 1 cut(s) | 199 |
| BstSCI | CCNGG | 1 cut(s) | 197 |
| BstV1I | GCAGC | 1 cut(s) | 41 |
| Bsu15I | ATCGAT | 1 cut(s) | 15 |
| BsuRI | GGCC | 2 cut(s) | 182, 283 |
| BsuTUI | ATCGAT | 1 cut(s) | 15 |
| BtgZI | GCGATG | 1 cut(s) | 282 |
| BtsIMutI | CAGTG | 2 cut(s) | 20, 125 |
| ClaI | ATCGAT | 1 cut(s) | 15 |
| CviJI | RGCY | 3 cut(s) | 164, 182, 283 |
| CviKI_1 | RGCY | 3 cut(s) | 164, 182, 283 |
| DdeI | CTNAG | 1 cut(s) | 42 |
| EaeI | YGGCCR | 1 cut(s) | 180 |
| EcoRII | CCWGG | 1 cut(s) | 197 |
| FaiI | YATR | 3 cut(s) | 96, 167, 264 |
| FblI | GTMKAC | 1 cut(s) | 205 |
| Fnu4HI | GCNGC | 1 cut(s) | 30 |
| Fsp4HI | GCNGC | 1 cut(s) | 30 |
| GluI | GCNGC | 1 cut(s) | 30 |
| HaeIII | GGCC | 2 cut(s) | 182, 283 |
| HapII | CCGG | 1 cut(s) | 183 |
| HinfI | GANTC | 3 cut(s) | 17, 207, 241 |
| HpaII | CCGG | 1 cut(s) | 183 |
| HphI | GGTGA | 2 cut(s) | 247, 262 |
| Hpy166II | GTNNAC | 1 cut(s) | 206 |
| Hpy8I | GTNNAC | 1 cut(s) | 206 |
| HpyAV | CCTTC | 3 cut(s) | 40, 213, 218 |
| HpyCH4III | ACNGT | 1 cut(s) | 120 |
| HpyCH4V | TGCA | 1 cut(s) | 194 |
| HpyF3I | CTNAG | 1 cut(s) | 42 |
| LpnPI | CCDG | 4 cut(s) | 184, 196, 211, 252 |
| Lsp1109I | GCAGC | 1 cut(s) | 41 |
| MaeIII | GTNAC | 1 cut(s) | 37 |
| MluCI | AATT | 3 cut(s) | 65, 132, 138 |
| MlyI | GAGTC | 2 cut(s) | 201, 235 |
| MmeI | TCCRAC | 1 cut(s) | 34 |
| MnlI | CCTC | 5 cut(s) | 167, 179, 231, 246, 273 |
| MspI | CCGG | 1 cut(s) | 183 |
| MspR9I | CCNGG | 1 cut(s) | 199 |
| MvaI | CCWGG | 1 cut(s) | 199 |
| NlaIV | GGNNCC | 1 cut(s) | 81 |
| PfeI | GAWTC | 1 cut(s) | 17 |
| PkrI | GCNGC | 1 cut(s) | 31 |
| PleI | GAGTC | 2 cut(s) | 201, 235 |
| PpsI | GAGTC | 2 cut(s) | 201, 235 |
| Psp6I | CCWGG | 1 cut(s) | 197 |
| PspGI | CCWGG | 1 cut(s) | 197 |
| PspN4I | GGNNCC | 1 cut(s) | 81 |
| SatI | GCNGC | 1 cut(s) | 30 |
| SchI | GAGTC | 2 cut(s) | 201, 235 |
| ScrFI | CCNGG | 1 cut(s) | 199 |
| SetI | ASST | 6 cut(s) | 39, 51, 81, 89, 200, 271 |
| SgeI | CNNG | 9 cut(s) | 88, 185, 190, 195, 210, 211, 221, 223, 279 |
| Sse9I | AATT | 3 cut(s) | 65, 132, 138 |
| StyD4I | CCNGG | 1 cut(s) | 197 |
| TaaI | ACNGT | 1 cut(s) | 120 |
| TaqI | TCGA | 2 cut(s) | 15, 172 |
| TasI | AATT | 3 cut(s) | 65, 132, 138 |
| TfiI | GAWTC | 1 cut(s) | 17 |
| TscAI | CASTG | 2 cut(s) | 27, 125 |
| TseI | GCWGC | 1 cut(s) | 29 |
| TspDTI | ATGAA | 2 cut(s) | 77, 159 |
| TspRI | CASTG | 2 cut(s) | 27, 125 |
| XmiI | GTMKAC | 1 cut(s) | 205 |