Rh7AG447100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
60734420 .. 60734665
246 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG447100.1

Sequence Viewer

Length: 159 bp
ATGATTGAAATTGATGAAATCTCTCTCGCAAAGGCAATGCTTCGAGGCGTGGCTGGAGGAGGTGCGACCTGGCCTGGACGCGTGGGGCGAAGGGAAGGCAAAGTGGTGAGGAGTGTCGACCACTTTGCTGTTATTCATTTGGGCCTTGCTGACCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

52

Amino Acids

5.57

Weight (kDa)

9.95

Isoelectric Point (pI)

36.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 117
AccII CGCG 1 cut(s) 81
AflIII ACRYGT 1 cut(s) 79
AgsI TTSAA 1 cut(s) 8
AjnI CCWGG 2 cut(s) 68, 73
AoxI GGCC 2 cut(s) 71, 142
AspS9I GGNCC 1 cut(s) 142
AsuHPI GGTGA 1 cut(s) 118
BcgI CGANNNNNNTGC 2 cut(s) 107, 141
BciT130I CCWGG 2 cut(s) 70, 75
Bme1390I CCNGG 2 cut(s) 70, 75
BmgT120I GGNCC 1 cut(s) 142
BmrFI CCNGG 2 cut(s) 70, 75
BpmI CTGGAG 1 cut(s) 75
Bse3DI GCAATG 1 cut(s) 42
BseBI CCWGG 2 cut(s) 70, 75
BseMI GCAATG 1 cut(s) 42
BseRI GAGGAG 2 cut(s) 72, 124
Bsh1236I CGCG 1 cut(s) 81
BshFI GGCC 2 cut(s) 73, 144
BsnI GGCC 2 cut(s) 73, 144
BspANI GGCC 2 cut(s) 73, 144
BspFNI CGCG 1 cut(s) 81
BsrDI GCAATG 1 cut(s) 42
Bst2UI CCWGG 2 cut(s) 70, 75
Bst4CI ACNGT 1 cut(s) 155
BstFNI CGCG 1 cut(s) 81
BstNI CCWGG 2 cut(s) 70, 75
BstSCI CCNGG 2 cut(s) 68, 73
BstUI CGCG 1 cut(s) 81
BsuRI GGCC 2 cut(s) 73, 144
Cfr13I GGNCC 1 cut(s) 142
CseI GACGC 1 cut(s) 87
CviJI RGCY 3 cut(s) 53, 73, 144
CviKI_1 RGCY 3 cut(s) 53, 73, 144
EcoRII CCWGG 2 cut(s) 68, 73
FblI GTMKAC 1 cut(s) 117
GsuI CTGGAG 1 cut(s) 75
HaeIII GGCC 2 cut(s) 73, 144
HgaI GACGC 1 cut(s) 87
HincII GTYRAC 1 cut(s) 118
HindII GTYRAC 1 cut(s) 118
HphI GGTGA 1 cut(s) 118
Hpy166II GTNNAC 1 cut(s) 118
Hpy8I GTNNAC 1 cut(s) 118
HpyAV CCTTC 2 cut(s) 84, 89
HpyCH4III ACNGT 1 cut(s) 155
LpnPI CCDG 5 cut(s) 39, 55, 60, 82, 87
MluCI AATT 1 cut(s) 9
MluI ACGCGT 1 cut(s) 79
MnlI CCTC 4 cut(s) 38, 50, 53, 102
MseI TTAA 1 cut(s) 157
MspR9I CCNGG 2 cut(s) 70, 75
MvaI CCWGG 2 cut(s) 70, 75
MvnI CGCG 1 cut(s) 81
PcsI WCGNNNNNNNCGW 1 cut(s) 85
Psp6I CCWGG 2 cut(s) 68, 73
PspGI CCWGG 2 cut(s) 68, 73
PspPI GGNCC 1 cut(s) 142
SalI GTCGAC 1 cut(s) 116
SaqAI TTAA 1 cut(s) 157
Sau96I GGNCC 1 cut(s) 142
ScrFI CCNGG 2 cut(s) 70, 75
SetI ASST 2 cut(s) 64, 71
Sse9I AATT 1 cut(s) 9
StyD4I CCNGG 2 cut(s) 68, 73
TaaI ACNGT 1 cut(s) 155
TaqI TCGA 2 cut(s) 43, 117
TasI AATT 1 cut(s) 9
Tru1I TTAA 1 cut(s) 157
Tru9I TTAA 1 cut(s) 157
TspDTI ATGAA 2 cut(s) 30, 125
XmiI GTMKAC 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.