Rmu_co8197244.1_g000001

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8197244.1
Physical Location & Seq
Reverse (-)
1 .. 593
593 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8197244.1_g000001.1.cds

Sequence Viewer

Length: 162 bp
atgaccatgacgcccaaggatttcagtgcaataactggaattcctgttagtggaaaaccacttgagtatgacatggattctcacacgaagaaggcacagcttttgcagttatgtggaaaaagacttgccgaccttgcaaaccaagctgtaacgtacacgcaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

54

Amino Acids

5.93

Weight (kDa)

7.89

Isoelectric Point (pI)

13.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 39
AcyI GRCGYC 1 cut(s) 11
AfaI GTAC 1 cut(s) 155
AfiI CCNNNNNNNGG 1 cut(s) 50
AluBI AGCT 2 cut(s) 100, 146
AluI AGCT 2 cut(s) 100, 146
ApoI RAATTY 1 cut(s) 39
BpuEI CTTGAG 1 cut(s) 83
BsaHI GRCGYC 1 cut(s) 11
BsaJI CCNNGG 1 cut(s) 15
Bsc4I CCNNNNNNNGG 1 cut(s) 50
Bse1I ACTGG 1 cut(s) 40
BseDI CCNNGG 1 cut(s) 15
BseLI CCNNNNNNNGG 1 cut(s) 50
BseNI ACTGG 1 cut(s) 40
BslI CCNNNNNNNGG 1 cut(s) 50
BsrI ACTGG 1 cut(s) 40
BssECI CCNNGG 1 cut(s) 15
BssNI GRCGYC 1 cut(s) 11
BssT1I CCWWGG 1 cut(s) 15
BstACI GRCGYC 1 cut(s) 11
BstMWI GCNNNNNNNGC 2 cut(s) 134, 143
BtsIMutI CAGTG 1 cut(s) 31
CseI GACGC 1 cut(s) 19
Csp6I GTAC 1 cut(s) 154
CviAII CATG 2 cut(s) 7, 73
CviJI RGCY 2 cut(s) 100, 146
CviKI_1 RGCY 2 cut(s) 100, 146
CviQI GTAC 1 cut(s) 154
Eco130I CCWWGG 1 cut(s) 15
EcoRI GAATTC 1 cut(s) 39
EcoT14I CCWWGG 1 cut(s) 15
ErhI CCWWGG 1 cut(s) 15
FaeI CATG 2 cut(s) 10, 76
FaiI YATR 4 cut(s) 8, 69, 74, 112
FatI CATG 2 cut(s) 6, 72
HgaI GACGC 1 cut(s) 19
Hin1I GRCGYC 1 cut(s) 11
Hin1II CATG 2 cut(s) 10, 76
HinfI GANTC 1 cut(s) 77
Hpy166II GTNNAC 1 cut(s) 156
Hpy8I GTNNAC 1 cut(s) 156
HpyAV CCTTC 1 cut(s) 85
HpyCH4IV ACGT 1 cut(s) 152
HpyCH4V TGCA 3 cut(s) 29, 106, 137
HpyF10VI GCNNNNNNNGC 2 cut(s) 134, 143
HpySE526I ACGT 1 cut(s) 152
Hsp92I GRCGYC 1 cut(s) 11
Hsp92II CATG 2 cut(s) 10, 76
LpnPI CCDG 2 cut(s) 21, 57
MaeII ACGT 1 cut(s) 152
MaeIII GTNAC 1 cut(s) 148
MboII GAAGA 1 cut(s) 100
MluCI AATT 1 cut(s) 39
MwoI GCNNNNNNNGC 2 cut(s) 134, 143
NlaIII CATG 2 cut(s) 10, 76
PfeI GAWTC 1 cut(s) 77
RsaI GTAC 1 cut(s) 155
RsaNI GTAC 1 cut(s) 154
SetI ASST 4 cut(s) 102, 135, 148, 155
SmlI CTYRAG 1 cut(s) 62
SmoI CTYRAG 1 cut(s) 62
Sse9I AATT 1 cut(s) 39
StyI CCWWGG 1 cut(s) 15
TaiI ACGT 1 cut(s) 155
TasI AATT 1 cut(s) 39
TfiI GAWTC 1 cut(s) 77
TscAI CASTG 1 cut(s) 31
TspRI CASTG 1 cut(s) 31
XapI RAATTY 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.