Rh4CG144100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
28829209 .. 28833097
3889 bp
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UTR
Exon/CDS
Intron
Rh4CG144100.1

Sequence Viewer

Length: 210 bp
ATGGATGAGGATGTTGACTACGACAAATATCGGAATGAGTATCTGGTTTATAAGCACCATACCATCTGTATCGATGAGCATGATGATGCGGATGACATAGGTGATGTGCATGCAACTAACACCGATGAGTGTCAGTATGAGGTTGATGGTGAAAATGTAAGTCCGACCGATAACACTCAACCTCTCAAAAAATCAAGGAGGGTTCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

69

Amino Acids

8.13

Weight (kDa)

4.42

Isoelectric Point (pI)

20.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 51
AciI CCGC 1 cut(s) 89
AsuHPI GGTGA 2 cut(s) 113, 161
BccI CCATC 2 cut(s) 71, 140
BmsI GCATC 1 cut(s) 76
Bsa29I ATCGAT 1 cut(s) 72
BseCI ATCGAT 1 cut(s) 72
BseGI GGATG 3 cut(s) 10, 16, 97
Bsh1285I CGRYCG 1 cut(s) 168
BshVI ATCGAT 1 cut(s) 72
BsiEI CGRYCG 1 cut(s) 168
BspACI CCGC 1 cut(s) 89
BspDI ATCGAT 1 cut(s) 72
BstC8I GCNNGC 1 cut(s) 111
BstF5I GGATG 3 cut(s) 10, 16, 97
BstMCI CGRYCG 1 cut(s) 168
BstNSI RCATGY 1 cut(s) 113
Bsu15I ATCGAT 1 cut(s) 72
BsuTUI ATCGAT 1 cut(s) 72
BtsCI GGATG 3 cut(s) 10, 16, 97
Cac8I GCNNGC 1 cut(s) 111
ClaI ATCGAT 1 cut(s) 72
CviAII CATG 2 cut(s) 80, 110
FaeI CATG 2 cut(s) 83, 113
FaiI YATR 6 cut(s) 51, 60, 81, 98, 111, 138
FatI CATG 2 cut(s) 79, 109
FokI GGATG 3 cut(s) 17, 23, 104
Hin1II CATG 2 cut(s) 83, 113
HincII GTYRAC 1 cut(s) 16
HindII GTYRAC 1 cut(s) 16
HphI GGTGA 2 cut(s) 113, 161
Hpy166II GTNNAC 1 cut(s) 16
Hpy188I TCNGA 2 cut(s) 33, 165
Hpy8I GTNNAC 1 cut(s) 16
HpyCH4V TGCA 2 cut(s) 109, 113
Hsp92II CATG 2 cut(s) 83, 113
LpnPI CCDG 1 cut(s) 29
LweI GCATC 1 cut(s) 76
MmeI TCCRAC 1 cut(s) 188
MnlI CCTC 3 cut(s) 133, 192, 192
MslI CAYNNNNRTG 1 cut(s) 84
NlaIII CATG 2 cut(s) 83, 113
NspI RCATGY 1 cut(s) 113
PaeI GCATGC 1 cut(s) 113
PsiI TTATAA 1 cut(s) 51
RseI CAYNNNNRTG 1 cut(s) 84
SetI ASST 3 cut(s) 103, 144, 184
SfaNI GCATC 1 cut(s) 76
SgeI CNNG 3 cut(s) 56, 92, 122
SmiMI CAYNNNNRTG 1 cut(s) 84
SphI GCATGC 1 cut(s) 113
SsiI CCGC 1 cut(s) 89
TaqI TCGA 1 cut(s) 72
TaqII GACCGA 1 cut(s) 182
XceI RCATGY 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.