Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000990.1

Orthogroup ID

OG0002352

Physical Location & Seq

Genomic Coordinates Forward (+)

73770 .. 75218

Gene Structure 1449 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1449 bp

atgggctgccttctctttctctctctcaagcccaccaccaccgccgccgccgccttcttcgttcttctaatcaccctcctctcttttctctctacaccctccaatgccgaccccgaccccgacccgaaaatcggcggcattgccacaacgtatgcttcaccgccgccacctgtacttaatgtggacaccgccgagaagcccaagtcgttccggcccagcatggccatcatggtcggagttctcacgactctgttctccttcacgtttcttctcctcctctacgccaagcactgcaagcgcggcagcttcgtcgtcatcggaggaaccgccgactccggacctcccggcggggcgggtctccgtaaaaactccggaatcgaccgggccgtcgtcgagtccctcccggttttccggttcaggtcgctccggggacacaaggacggcctcgaatgcgccgtctgcctcacccgattcgagcccaccgaggtcctccgcctcctcccgaaatgcaagcacgccttccacgtcgagtgcgtcgacacgtggctcgacgcccactccacctgcccgctctgccgctaccgggtcgacccggaagacatcctcctaatcgaagacgccagaatcctgcaccaccaggaagacgccagaatcctgcaccaccagaacagccagccccagactccccaccaaaacgacgtcgtcatcaacgtcgaagccgacccgggaatccgccgcgtgtcggggcgccactcctccgccttggagcagcgacccggctcctcctctcacgacaatacgtcgtcgttccggaggtccctcgacagctggacctggttccggaaaaaaaccgaacccgccgccgccgccgccggaagccaagaacgtccgagaaaagacggccttcttttaagccacgacaaaacgaggctggagcaccgaatcatcgtctcctccccgagatcaagcaacaccggcggcggtggtgggttccaccaacgatggagcgacgtacagccgtccgatcttctctaccttcgctccgagatgatcataagcgataacggactgacacgtcaggggcaggaggaaccgttgcggtgtggcaatggggccgttccagctggggacattaatggaggcagagacagtggcagtggcagaggcgtaataaacgagcgaagcgtgtcggaaatcacggggttgagcaggttttcgaacagagggagcagtaatgagaggagcaatcagcaccaccaacaccaaaaccaaaaccatcagcagcgttaccaacagcgacagctcaggctcgtatccaggtgggtcgcttggatttcgtcccagtcacgcccagctgcacggtctgatcgtactactggtgctgcttcccccaccactccacagcctgcaccaccaccaccgcctttacccactgtggccactgcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

482

Amino Acids

52.79

Weight (kDa)

9.37

Isoelectric Point (pI)

55.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	150 - 193	2e-13	Ring finger domain
zf-RING_11	PF17123	150 - 179	1.1e-09	RING-like zinc finger
zf-C3HC4_2	PF13923	150 - 192	4.2e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	151 - 192	2.3e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	163 - 193	5.7e-08	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05810
fragaria_vesca	FvH4_4g06660
malus_domestica	MD13G1236900.v1.1 MD16G1242200.v1.1
prunus_persica	Prupe.1G069300_v2.0.a1
pyrus_communis	pycom13g20980 pycom16g20300
rosa_chinensis	RchiOBHm_Chr3g0495141 RchiOBHm_Chr4g0398561
rosa_laevigata	RLG00000009344 RLG00000026064 RLG00000029692 RLG00000030599 RLG00000032695 RLG00000032696
rosa_multiflora	Rmu_co8139468.1_g000001 Rmu_co8270033.1_g000001 Rmu_co8275827.1_g000001 Rmu_sc0000185.1_g000029 Rmu_sc0000990.1_g000016 Rmu_sc0005217.1_g000007 Rmu_sc0005996.1_g000027 Rmu_sc0009001.1_g000015 Rmu_sc0013727.1_g000001 Rmu_sc0016350.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343530
rosa_rugosa	Rorug04G0009400
rosa_samantha	Rh1AG207300 Rh2AG231000 Rh2AG449700 Rh2CG436600 Rh2DG238800 Rh3DG271300 Rh4AG087300 Rh4BG083900 Rh4CG095500 Rh4DG078800 Rh4DG124400 Rh5DG085200 Rh6BG230400
rosa_wichuraiana	Rw1G018260 Rw1G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	572
AasI	GACNNNNNNGTC	2 cut(s)	386, 1074
AatII	GACGTC	1 cut(s)	702
Acc36I	ACCTGC	2 cut(s)	572, 1200
AccB1I	GGYRCC	1 cut(s)	747
AccBSI	CCGCTC	1 cut(s)	571
AccI	GTMKAC	2 cut(s)	537, 588
AccII	CGCG	2 cut(s)	300, 738
AccIII	TCCGGA	4 cut(s)	335, 371, 810, 840
AcoI	YGGCCR	2 cut(s)	222, 1437
AcvI	CACGTG	1 cut(s)	543
AcyI	GRCGYC	5 cut(s)	552, 618, 645, 699, 748
AfaI	GTAC	3 cut(s)	174, 1014, 1372
AfiI	CCNNNNNNNGG	5 cut(s)	131, 347, 583, 742, 840
AflIII	ACRYGT	2 cut(s)	540, 1073
AhdI	GACNNNNNGTC	1 cut(s)	799
AjiI	CACGTC	2 cut(s)	526, 1076
AjnI	CCWGG	3 cut(s)	636, 833, 1316
AluBI	AGCT	5 cut(s)	306, 828, 1124, 1303, 1355
AluI	AGCT	5 cut(s)	306, 828, 1124, 1303, 1355
Alw21I	GWGCWC	1 cut(s)	939
Alw26I	GTCTC	3 cut(s)	362, 955, 1140
Ama87I	CYCGRG	2 cut(s)	724, 958
Aor13HI	TCCGGA	4 cut(s)	335, 371, 810, 840
AoxI	GGCC	7 cut(s)	212, 222, 384, 442, 901, 1113, 1437
ApeKI	GCWGC	6 cut(s)	6, 303, 769, 1282, 1355, 1382
ArsI	GACNNNNNNTTYG	2 cut(s)	441, 473
AseI	ATTAAT	1 cut(s)	1134
AspLEI	GCGC	3 cut(s)	300, 455, 750
AspS9I	GGNCC	7 cut(s)	213, 338, 384, 487, 816, 831, 1113
AsuC2I	CCSGG	9 cut(s)	345, 383, 404, 428, 584, 593, 725, 726, 777
AsuHPI	GGTGA	3 cut(s)	64, 150, 457
AsuII	TTCGAA	1 cut(s)	1217
AvaI	CYCGRG	2 cut(s)	724, 958
AvaII	GGWCC	4 cut(s)	338, 487, 816, 831
BalI	TGGCCA	2 cut(s)	224, 1439
BanI	GGYRCC	1 cut(s)	747
BanII	GRGCYC	1 cut(s)	480
BbrPI	CACGTG	1 cut(s)	543
BbsI	GAAGAC	3 cut(s)	603, 621, 648
Bbv12I	GWGCWC	1 cut(s)	939
BbvI	GCAGC	5 cut(s)	315, 781, 1294, 1342, 1369
BccI	CCATC	3 cut(s)	233, 996, 1284
BceAI	ACGGC	6 cut(s)	371, 440, 457, 916, 1003, 1100
BcgI	CGANNNNNNTGC	2 cut(s)	292, 326
BciT130I	CCWGG	3 cut(s)	638, 835, 1318
BciVI	GTATCC	1 cut(s)	1324
BclI	TGATCA	1 cut(s)	1050
BcnI	CCSGG	9 cut(s)	345, 383, 404, 428, 584, 593, 725, 726, 777
BcoDI	GTCTC	3 cut(s)	362, 955, 1140
BfoI	RGCGCY	1 cut(s)	751
BfuAI	ACCTGC	2 cut(s)	572, 1200
BfuI	GTATCC	1 cut(s)	1324
Bme18I	GGWCC	4 cut(s)	338, 487, 816, 831
BmeRI	GACNNNNNGTC	1 cut(s)	799
BmeT110I	CYCGRG	2 cut(s)	724, 958
BmgBI	CACGTC	2 cut(s)	526, 1076
BmgT120I	GGNCC	7 cut(s)	213, 338, 384, 487, 816, 831, 1113
BmiI	GGNNCC	8 cut(s)	325, 749, 781, 818, 839, 992, 1092, 1114
BmrI	ACTGGG	1 cut(s)	1336
BmuI	ACTGGG	1 cut(s)	1336
BpiI	GAAGAC	3 cut(s)	603, 621, 648
BpmI	CTGGAG	1 cut(s)	953
Bpu10I	CCTNAGC	1 cut(s)	1304
Bpu14I	TTCGAA	1 cut(s)	1217
BpuEI	CTTGAG	1 cut(s)	11
BpuMI	CCSGG	9 cut(s)	345, 383, 404, 428, 584, 593, 725, 726, 777
BsaAI	YACGTR	1 cut(s)	543
BsaHI	GRCGYC	5 cut(s)	552, 618, 645, 699, 748
BsaI	GGTCTC	1 cut(s)	362
BsaJI	CCNNGG	4 cut(s)	427, 483, 724, 762
BsaWI	WCCGGW	5 cut(s)	335, 371, 411, 810, 840
BsaXI	ACNNNNNCTCC	6 cut(s)	542, 572, 1025, 1055, 1079, 1109
Bsc4I	CCNNNNNNNGG	5 cut(s)	131, 347, 583, 742, 840
Bse118I	RCCGGY	1 cut(s)	974
Bse1I	ACTGG	2 cut(s)	1342, 1381
Bse3DI	GCAATG	2 cut(s)	138, 1114
BseAI	TCCGGA	4 cut(s)	335, 371, 810, 840
BseBI	CCWGG	3 cut(s)	638, 835, 1318
BseDI	CCNNGG	4 cut(s)	427, 483, 724, 762
BseGI	GGATG	1 cut(s)	600
BseLI	CCNNNNNNNGG	5 cut(s)	131, 347, 583, 742, 840
BseMI	GCAATG	2 cut(s)	138, 1114
BseMII	CTCAG	1 cut(s)	1318
BseNI	ACTGG	2 cut(s)	1342, 1381
BseRI	GAGGAG	9 cut(s)	68, 263, 266, 488, 745, 772, 775, 943, 1255
BseXI	GCAGC	5 cut(s)	315, 781, 1294, 1342, 1369
BseYI	CCCAGC	3 cut(s)	215, 1124, 1351
BsgI	GTGCAG	4 cut(s)	614, 641, 1341, 1392
Bsh1236I	CGCG	2 cut(s)	300, 738
Bsh1285I	CGRYCG	1 cut(s)	382
BshFI	GGCC	7 cut(s)	214, 224, 386, 444, 903, 1115, 1439
BshNI	GGYRCC	1 cut(s)	747
BsiEI	CGRYCG	1 cut(s)	382
BsiHKAI	GWGCWC	1 cut(s)	939
BsiHKCI	CYCGRG	2 cut(s)	724, 958
BslFI	GGGAC	5 cut(s)	382, 444, 802, 1142, 1324
BslI	CCNNNNNNNGG	5 cut(s)	131, 347, 583, 742, 840
BsmAI	GTCTC	3 cut(s)	362, 955, 1140
BsmBI	CGTCTC	1 cut(s)	955
BsmFI	GGGAC	5 cut(s)	382, 444, 802, 1142, 1324
BsmI	GAATGC	1 cut(s)	455
BsnI	GGCC	7 cut(s)	214, 224, 386, 444, 903, 1115, 1439
Bso31I	GGTCTC	1 cut(s)	362
BsoBI	CYCGRG	2 cut(s)	724, 958
Bsp119I	TTCGAA	1 cut(s)	1217
Bsp1286I	GDGCHC	2 cut(s)	480, 939
Bsp13I	TCCGGA	4 cut(s)	335, 371, 810, 840
Bsp143I	GATC	4 cut(s)	962, 1024, 1050, 1366
BspANI	GGCC	7 cut(s)	214, 224, 386, 444, 903, 1115, 1439
BspCNI	CTCAG	1 cut(s)	1317
BspEI	TCCGGA	4 cut(s)	335, 371, 810, 840
BspFNI	CGCG	2 cut(s)	300, 738
BspLI	GGNNCC	8 cut(s)	325, 749, 781, 818, 839, 992, 1092, 1114
BspMI	ACCTGC	2 cut(s)	572, 1200
BspT104I	TTCGAA	1 cut(s)	1217
BspT107I	GGYRCC	1 cut(s)	747
BspTNI	GGTCTC	1 cut(s)	362
BsrBI	CCGCTC	1 cut(s)	571
BsrDI	GCAATG	2 cut(s)	138, 1114
BsrFI	RCCGGY	1 cut(s)	974
BsrI	ACTGG	2 cut(s)	1342, 1381
BssAI	RCCGGY	1 cut(s)	974
BssECI	CCNNGG	4 cut(s)	427, 483, 724, 762
BssMI	GATC	4 cut(s)	962, 1024, 1050, 1366
BssNI	GRCGYC	5 cut(s)	552, 618, 645, 699, 748
BssT1I	CCWWGG	1 cut(s)	762
Bst2UI	CCWGG	3 cut(s)	638, 835, 1318
Bst4CI	ACNGT	4 cut(s)	1095, 1151, 1362, 1435
BstACI	GRCGYC	5 cut(s)	552, 618, 645, 699, 748
BstBAI	YACGTR	1 cut(s)	543
BstBI	TTCGAA	1 cut(s)	1217
BstC8I	GCNNGC	6 cut(s)	296, 512, 516, 569, 674, 1407
BstDEI	CTNAG	1 cut(s)	1304
BstF5I	GGATG	1 cut(s)	600
BstFNI	CGCG	2 cut(s)	300, 738
BstH2I	RGCGCY	1 cut(s)	751
BstHHI	GCGC	3 cut(s)	300, 455, 750
BstKTI	GATC	4 cut(s)	965, 1027, 1053, 1369
BstMAI	GTCTC	3 cut(s)	362, 955, 1140
BstMBI	GATC	4 cut(s)	962, 1024, 1050, 1366
BstMCI	CGRYCG	1 cut(s)	382
BstNI	CCWGG	3 cut(s)	638, 835, 1318
BstUI	CGCG	2 cut(s)	300, 738
BstV1I	GCAGC	5 cut(s)	315, 781, 1294, 1342, 1369
BstV2I	GAAGAC	3 cut(s)	603, 621, 648
BsuI	GTATCC	1 cut(s)	1324
BsuRI	GGCC	7 cut(s)	214, 224, 386, 444, 903, 1115, 1439
BtrI	CACGTC	2 cut(s)	526, 1076
BtsCI	GGATG	1 cut(s)	600
BtsI	GCAGTG	3 cut(s)	289, 1162, 1440
BtsIMutI	CAGTG	5 cut(s)	289, 1156, 1162, 1431, 1440
BveI	ACCTGC	2 cut(s)	572, 1200
Cac8I	GCNNGC	6 cut(s)	296, 512, 516, 569, 674, 1407
CfoI	GCGC	3 cut(s)	300, 455, 750
Cfr10I	RCCGGY	1 cut(s)	974
Cfr13I	GGNCC	7 cut(s)	213, 338, 384, 487, 816, 831, 1113
Cfr9I	CCCGGG	1 cut(s)	724
CseI	GACGC	4 cut(s)	523, 560, 626, 653
CsiI	ACCWGGT	1 cut(s)	833
Csp6I	GTAC	3 cut(s)	173, 1013, 1371
CviAII	CATG	2 cut(s)	220, 229
CviQI	GTAC	3 cut(s)	173, 1013, 1371
DdeI	CTNAG	1 cut(s)	1304
DinI	GGCGCC	1 cut(s)	749
DpnI	GATC	4 cut(s)	964, 1026, 1052, 1368
DpnII	GATC	4 cut(s)	962, 1024, 1050, 1366
DrdI	GACNNNNNNGTC	2 cut(s)	386, 1074
DriI	GACNNNNNGTC	1 cut(s)	799
DseDI	GACNNNNNNGTC	2 cut(s)	386, 1074
EaeI	YGGCCR	2 cut(s)	222, 1437
Eam1105I	GACNNNNNGTC	1 cut(s)	799
EciI	GGCGGA	3 cut(s)	482, 722, 748
Eco130I	CCWWGG	1 cut(s)	762
Eco24I	GRGCYC	1 cut(s)	480
Eco31I	GGTCTC	1 cut(s)	362
Eco47I	GGWCC	4 cut(s)	338, 487, 816, 831
Eco72I	CACGTG	1 cut(s)	543
Eco88I	CYCGRG	2 cut(s)	724, 958
EcoO109I	RGGNCCY	2 cut(s)	487, 816
EcoRII	CCWGG	3 cut(s)	636, 833, 1316
EcoT14I	CCWWGG	1 cut(s)	762
EcoT38I	GRGCYC	1 cut(s)	480
EgeI	GGCGCC	1 cut(s)	749
EheI	GGCGCC	1 cut(s)	749
ErhI	CCWWGG	1 cut(s)	762
Esp3I	CGTCTC	1 cut(s)	955
FaeI	CATG	2 cut(s)	223, 232
FaiI	YATR	4 cut(s)	153, 221, 230, 1055
FalI	AAGNNNNNCTT	4 cut(s)	503, 535, 888, 920
FaqI	GGGAC	5 cut(s)	382, 444, 802, 1142, 1324
FatI	CATG	2 cut(s)	219, 228
FauI	CCCGC	4 cut(s)	341, 346, 576, 865
FbaI	TGATCA	1 cut(s)	1050
FblI	GTMKAC	2 cut(s)	537, 588
FokI	GGATG	1 cut(s)	587
FriOI	GRGCYC	1 cut(s)	480
GlaI	GCGC	3 cut(s)	299, 454, 749
GsaI	CCCAGC	3 cut(s)	219, 1128, 1355
GsuI	CTGGAG	1 cut(s)	953
HaeII	RGCGCY	1 cut(s)	751
HaeIII	GGCC	7 cut(s)	214, 224, 386, 444, 903, 1115, 1439
HgaI	GACGC	4 cut(s)	523, 560, 626, 653
HhaI	GCGC	3 cut(s)	300, 455, 750
Hin1I	GRCGYC	5 cut(s)	552, 618, 645, 699, 748
Hin1II	CATG	2 cut(s)	223, 232
Hin6I	GCGC	3 cut(s)	298, 453, 748
HinP1I	GCGC	3 cut(s)	298, 453, 748
HincII	GTYRAC	2 cut(s)	538, 589
HindII	GTYRAC	2 cut(s)	538, 589
HphI	GGTGA	3 cut(s)	64, 150, 457
Hpy166II	GTNNAC	3 cut(s)	184, 538, 589
Hpy188I	TCNGA	7 cut(s)	236, 320, 891, 1024, 1045, 1192, 1366
Hpy188III	TCNNGA	7 cut(s)	244, 336, 372, 502, 791, 811, 841
Hpy8I	GTNNAC	3 cut(s)	184, 538, 589
HpyAV	CCTTC	6 cut(s)	20, 64, 268, 529, 914, 1046
HpyCH4III	ACNGT	4 cut(s)	1095, 1151, 1362, 1435
HpyCH4V	TGCA	6 cut(s)	294, 510, 631, 658, 1358, 1409
HpyF3I	CTNAG	1 cut(s)	1304
Hsp92I	GRCGYC	5 cut(s)	552, 618, 645, 699, 748
Hsp92II	CATG	2 cut(s)	223, 232
HspAI	GCGC	3 cut(s)	298, 453, 748
KasI	GGCGCC	1 cut(s)	747
Kpn2I	TCCGGA	4 cut(s)	335, 371, 810, 840
Ksp22I	TGATCA	1 cut(s)	1050
Kzo9I	GATC	4 cut(s)	962, 1024, 1050, 1366
LmnI	GCTCC	8 cut(s)	429, 766, 785, 934, 1005, 1046, 1227, 1242
Lsp1109I	GCAGC	5 cut(s)	315, 781, 1294, 1342, 1369
MabI	ACCWGGT	1 cut(s)	833
MaeIII	GTNAC	2 cut(s)	1286, 1344
MalI	GATC	4 cut(s)	964, 1026, 1052, 1368
MbiI	CCGCTC	1 cut(s)	571
MboI	GATC	4 cut(s)	962, 1024, 1050, 1366
MboII	GAAGA	7 cut(s)	49, 56, 260, 608, 626, 653, 1019
MhlI	GDGCHC	2 cut(s)	480, 939
MlsI	TGGCCA	2 cut(s)	224, 1439
MluNI	TGGCCA	2 cut(s)	224, 1439
Mly113I	GGCGCC	1 cut(s)	748
MlyI	GAGTC	4 cut(s)	241, 326, 404, 676
MmeI	TCCRAC	2 cut(s)	214, 1170
Mox20I	TGGCCA	2 cut(s)	224, 1439
MroI	TCCGGA	4 cut(s)	335, 371, 810, 840
MscI	TGGCCA	2 cut(s)	224, 1439
MseI	TTAA	3 cut(s)	177, 911, 1134
Msp20I	TGGCCA	2 cut(s)	224, 1439
MspA1I	CMGCKG	3 cut(s)	828, 1124, 1355
Mva1269I	GAATGC	1 cut(s)	455
MvaI	CCWGG	3 cut(s)	638, 835, 1318
MvnI	CGCG	2 cut(s)	300, 738
NarI	GGCGCC	1 cut(s)	748
NciI	CCSGG	9 cut(s)	345, 383, 404, 428, 584, 593, 725, 726, 777
NdeII	GATC	4 cut(s)	962, 1024, 1050, 1366
NlaIII	CATG	2 cut(s)	223, 232
NlaIV	GGNNCC	8 cut(s)	325, 749, 781, 818, 839, 992, 1092, 1114
NmeAIII	GCCGAG	1 cut(s)	217
NmuCI	GTSAC	1 cut(s)	1344
NspV	TTCGAA	1 cut(s)	1217
PaqCI	CACCTGC	1 cut(s)	572
PctI	GAATGC	1 cut(s)	455
PfeI	GAWTC	6 cut(s)	375, 471, 624, 651, 729, 942
PflFI	GACNNNGTC	1 cut(s)	701
PleI	GAGTC	4 cut(s)	241, 326, 403, 676
PluTI	GGCGCC	1 cut(s)	751
PmaCI	CACGTG	1 cut(s)	543
PmlI	CACGTG	1 cut(s)	543
PpsI	GAGTC	4 cut(s)	241, 326, 403, 676
Ppu21I	YACGTR	1 cut(s)	543
PpuMI	RGGWCCY	2 cut(s)	487, 816
PshBI	ATTAAT	1 cut(s)	1134
Psp5II	RGGWCCY	2 cut(s)	487, 816
Psp6I	CCWGG	3 cut(s)	636, 833, 1316
PspCI	CACGTG	1 cut(s)	543
PspFI	CCCAGC	3 cut(s)	215, 1124, 1351
PspGI	CCWGG	3 cut(s)	636, 833, 1316
PspN4I	GGNNCC	8 cut(s)	325, 749, 781, 818, 839, 992, 1092, 1114
PspPI	GGNCC	7 cut(s)	213, 338, 384, 487, 816, 831, 1113
PspPPI	RGGWCCY	2 cut(s)	487, 816
PsyI	GACNNNGTC	1 cut(s)	701
PvuII	CAGCTG	3 cut(s)	828, 1124, 1355
RsaI	GTAC	3 cut(s)	174, 1014, 1372
RsaNI	GTAC	3 cut(s)	173, 1013, 1371
SalI	GTCGAC	2 cut(s)	536, 587
SaqAI	TTAA	3 cut(s)	177, 911, 1134
Sau3AI	GATC	4 cut(s)	962, 1024, 1050, 1366
Sau96I	GGNCC	7 cut(s)	213, 338, 384, 487, 816, 831, 1113
SchI	GAGTC	4 cut(s)	241, 326, 404, 676
SduI	GDGCHC	2 cut(s)	480, 939
SexAI	ACCWGGT	1 cut(s)	833
SfoI	GGCGCC	1 cut(s)	749
SfuI	TTCGAA	1 cut(s)	1217
SgrAI	CRCCGGYG	1 cut(s)	974
SinI	GGWCC	4 cut(s)	338, 487, 816, 831
SmaI	CCCGGG	1 cut(s)	726
SmlI	CTYRAG	1 cut(s)	26
SmoI	CTYRAG	1 cut(s)	26
SspDI	GGCGCC	1 cut(s)	747
StyI	CCWWGG	1 cut(s)	762
TaaI	ACNGT	4 cut(s)	1095, 1151, 1362, 1435
TatI	WGTACW	1 cut(s)	172
TfiI	GAWTC	6 cut(s)	375, 471, 624, 651, 729, 942
Tru1I	TTAA	3 cut(s)	177, 911, 1134
Tru9I	TTAA	3 cut(s)	177, 911, 1134
TscAI	CASTG	5 cut(s)	296, 1156, 1162, 1438, 1447
TseFI	GTSAC	1 cut(s)	1344
TseI	GCWGC	6 cut(s)	6, 303, 769, 1282, 1355, 1382
Tsp45I	GTSAC	1 cut(s)	1344
TspGWI	ACGGA	2 cut(s)	350, 1080
TspMI	CCCGGG	1 cut(s)	724
TspRI	CASTG	5 cut(s)	296, 1156, 1162, 1438, 1447
Tth111I	GACNNNGTC	1 cut(s)	701
VpaK11BI	GGWCC	4 cut(s)	338, 487, 816, 831
VspI	ATTAAT	1 cut(s)	1134
XmaI	CCCGGG	1 cut(s)	724
XmiI	GTMKAC	2 cut(s)	537, 588
ZraI	GACGTC	1 cut(s)	700

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.