Rmu_sc0001557.1_g000021

Piriformospora indica-insensitive protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001557.1
Physical Location & Seq
Forward (+)
81396 .. 84110
2715 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001557.1_g000021.1.cds

Sequence Viewer

Length: 1644 bp
atgaagcgttttgttctgttattgttcttctggtgcagcgccatttttgtattgcttgtagtacaagcagacccttcaatttcacctatgcaggaaaaagagcaacaagccctttactctactatccaaggctttgtggggaactggtggaatggttcagatctctatccagatccttgtggctggactccgatacagggagtttattgtgatctctacaatggtttctggtatgttgctgttataaacattgggccgctttatgacaactatcttccttgcaccccaaatgcagaattttcacatcacctattcaagctcaagcacttaaaggtcctctcattcttcaattgcttcctctcgccaattacaatttcccatttaaactgggaaaggctttcaaacagtatagaatccttggagtttcgatcaaacccaggtctcattgggagaattccgaacacttttggttaccttacaaagctgcaatctctagtgctgctacaaaatgggttacaaggcaagttgcctagtcaaataggcaatctagtgaacttgaggcgtcttgtcctagcaggaaacaatctttctggtaagattccagtaagtcttggaagaatgactaagcttttaatacttgatgcaagcagaaacaagctatctggttcattacctctgacttttggatctttgagttcacttctaaagcttgatttaagcaacaatatgatagagggtaagttgcctgtagagcttggaaggctaaaaagtctcacactattagatcttggaagtaacaaaatttcaggtggcttggtccagtcacttcaagaaatggtttctttgaaagaattggtgatatccaacaatccaattgggggtggcctcgtcagaattcagtggcataatctacacaagctggaaattttggacctttcaagcacatttttgacagggcacattcctaagtccttggcagaaatgaaaagactaaggtttttggggctcaacaataacaatctctcaggaagaatatctccaatgctggaatctctgccttgcattggtgctctttacctctatggaaacaatttcacaggagaagttaaattctcagaagggttctatcggaaaatggggaggcgatttggagcttggaacaacccgaatctatgttaccgagctgaatcaagttcaccacagtatgttccttatgggtttgaagttggagggaagagtggatgggaggtccctaaatcaaaggatgactacaaccaatgggcatcaacaaaccggttcaaagtaaacgacactgttcatttcagctacaaggaagactcggtgatggtagtaacggaggacgagtatgacaagtgccattcggcacgtccgatcttcttcaacaacaatggaaacactgagtacaagttggcccggccggggttgttctacttcataagtggggtgaaagggcactgtccgagaggccagaagatgatcatcaaggtgttggaaccggcgagccctcctcagccttctatagactcgcagaaaaagaatggtgctgctgcaatggctgctgctgtttcttctgcaactgttatgctttgcgttgtgtcattccttgcggttttcctgttctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

547

Amino Acids

61.02

Weight (kDa)

9.19

Isoelectric Point (pI)

38.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 245
AciI CCGC 2 cut(s) 257, 1628
AclWI GGATC 2 cut(s) 167, 694
AcoI YGGCCR 1 cut(s) 1436
AcsI RAATTY 6 cut(s) 296, 453, 801, 894, 924, 1109
AcyI GRCGYC 1 cut(s) 562
AfaI GTAC 2 cut(s) 63, 1424
AfiI CCNNNNNNNGG 4 cut(s) 197, 878, 1064, 1440
AgeI ACCGGT 1 cut(s) 1293
AjiI CACGTC 1 cut(s) 1388
AjnI CCWGG 1 cut(s) 436
AjuI GAANNNNNNNTTGG 2 cut(s) 358, 390
Alw21I GWGCWC 1 cut(s) 1072
Alw26I GTCTC 2 cut(s) 446, 776
AlwI GGATC 2 cut(s) 167, 694
AoxI GGCC 5 cut(s) 254, 883, 1431, 1436, 1486
ApeKI GCWGC 7 cut(s) 36, 484, 499, 1565, 1568, 1577, 1580
ApoI RAATTY 6 cut(s) 296, 453, 801, 894, 924, 1109
AsiGI ACCGGT 1 cut(s) 1293
AspLEI GCGC 1 cut(s) 41
AspS9I GGNCC 6 cut(s) 254, 334, 817, 931, 1249, 1432
AsuC2I CCSGG 2 cut(s) 1435, 1440
AsuHPI GGTGA 6 cut(s) 75, 299, 868, 1188, 1354, 1477
AvaII GGWCC 4 cut(s) 334, 817, 931, 1249
BaeGI GKGCMC 2 cut(s) 960, 1476
BanII GRGCYC 2 cut(s) 1008, 1526
BbsI GAAGAC 1 cut(s) 1341
Bbv12I GWGCWC 1 cut(s) 1072
BbvCI CCTCAGC 1 cut(s) 1530
BbvI GCAGC 7 cut(s) 48, 471, 486, 1552, 1555, 1564, 1567
BccI CCATC 2 cut(s) 1236, 1339
BciT130I CCWGG 1 cut(s) 438
BclI TGATCA 1 cut(s) 1497
BcnI CCSGG 2 cut(s) 1435, 1440
BcoDI GTCTC 2 cut(s) 446, 776
BfaI CTAG 5 cut(s) 494, 531, 548, 572, 1642
BfmI CTRYAG 2 cut(s) 747, 1539
BfoI RGCGCY 1 cut(s) 42
BglII AGATCT 2 cut(s) 160, 784
BisI GCNGC 8 cut(s) 37, 257, 485, 500, 1566, 1569, 1578, 1581
BlsI GCNGC 8 cut(s) 38, 258, 486, 501, 1567, 1570, 1579, 1582
Bme1390I CCNGG 3 cut(s) 438, 1435, 1440
Bme18I GGWCC 4 cut(s) 334, 817, 931, 1249
BmgBI CACGTC 1 cut(s) 1388
BmgT120I GGNCC 6 cut(s) 254, 334, 817, 931, 1249, 1432
BmiI GGNNCC 2 cut(s) 1251, 1515
BmrFI CCNGG 3 cut(s) 438, 1435, 1440
BmrI ACTGGG 1 cut(s) 397
BmsI GCATC 2 cut(s) 631, 1292
BmuI ACTGGG 1 cut(s) 397
BpiI GAAGAC 1 cut(s) 1341
BplI GAGNNNNNCTC 2 cut(s) 1513, 1545
Bpu10I CCTNAGC 1 cut(s) 1530
BpuEI CTTGAG 2 cut(s) 305, 577
BpuMI CCSGG 2 cut(s) 1435, 1440
BsaBI GATNNNNATC 2 cut(s) 165, 1499
BsaHI GRCGYC 1 cut(s) 562
BsaI GGTCTC 1 cut(s) 446
BsaJI CCNNGG 5 cut(s) 127, 417, 436, 972, 1439
BsaWI WCCGGW 1 cut(s) 1293
BsaXI ACNNNNNCTCC 2 cut(s) 1349, 1379
Bsc4I CCNNNNNNNGG 4 cut(s) 197, 878, 1064, 1440
Bse118I RCCGGY 2 cut(s) 1293, 1516
Bse1I ACTGG 4 cut(s) 149, 392, 602, 820
Bse3DI GCAATG 1 cut(s) 1578
Bse8I GATNNNNATC 2 cut(s) 165, 1499
BseBI CCWGG 1 cut(s) 438
BseDI CCNNGG 5 cut(s) 127, 417, 436, 972, 1439
BseGI GGATG 2 cut(s) 1247, 1270
BseJI GATNNNNATC 2 cut(s) 165, 1499
BseLI CCNNNNNNNGG 4 cut(s) 197, 878, 1064, 1440
BseMI GCAATG 1 cut(s) 1578
BseMII CTCAG 4 cut(s) 1038, 1128, 1410, 1544
BseNI ACTGG 4 cut(s) 149, 392, 602, 820
BseRI GAGGAG 1 cut(s) 1518
BseSI GKGCMC 2 cut(s) 960, 1476
BseX3I CGGCCG 1 cut(s) 1436
BseXI GCAGC 7 cut(s) 48, 471, 486, 1552, 1555, 1564, 1567
BsgI GTGCAG 1 cut(s) 55
Bsh1285I CGRYCG 1 cut(s) 1439
BshFI GGCC 5 cut(s) 256, 885, 1433, 1438, 1488
BshTI ACCGGT 1 cut(s) 1293
BsiEI CGRYCG 1 cut(s) 1439
BsiHKAI GWGCWC 1 cut(s) 1072
BsiSI CCGG 4 cut(s) 1294, 1435, 1439, 1517
BslFI GGGAC 1 cut(s) 1235
BslI CCNNNNNNNGG 4 cut(s) 197, 878, 1064, 1440
BsmAI GTCTC 2 cut(s) 446, 776
BsmFI GGGAC 1 cut(s) 1235
BsnI GGCC 5 cut(s) 256, 885, 1433, 1438, 1488
Bso31I GGTCTC 1 cut(s) 446
Bsp1286I GDGCHC 5 cut(s) 960, 1008, 1072, 1476, 1526
Bsp143I GATC 8 cut(s) 160, 172, 211, 428, 686, 784, 1392, 1497
BspACI CCGC 2 cut(s) 257, 1628
BspANI GGCC 5 cut(s) 256, 885, 1433, 1438, 1488
BspCNI CTCAG 4 cut(s) 1037, 1127, 1411, 1543
BspLI GGNNCC 2 cut(s) 1251, 1515
BspPI GGATC 2 cut(s) 167, 694
BspTNI GGTCTC 1 cut(s) 446
BsrDI GCAATG 1 cut(s) 1578
BsrFI RCCGGY 2 cut(s) 1293, 1516
BsrI ACTGG 4 cut(s) 149, 392, 602, 820
BssAI RCCGGY 2 cut(s) 1293, 1516
BssECI CCNNGG 5 cut(s) 127, 417, 436, 972, 1439
BssMI GATC 8 cut(s) 160, 172, 211, 428, 686, 784, 1392, 1497
BssNI GRCGYC 1 cut(s) 562
BssT1I CCWWGG 3 cut(s) 127, 417, 972
Bst2UI CCWGG 1 cut(s) 438
Bst4CI ACNGT 5 cut(s) 407, 1203, 1315, 1478, 1600
Bst6I CTCTTC 1 cut(s) 1229
BstACI GRCGYC 1 cut(s) 562
BstAPI GCANNNNNTGC 1 cut(s) 1577
BstC8I GCNNGC 2 cut(s) 646, 1522
BstDEI CTNAG 7 cut(s) 624, 966, 992, 1024, 1114, 1419, 1530
BstEII GGTNACC 1 cut(s) 470
BstF5I GGATG 2 cut(s) 1247, 1270
BstH2I RGCGCY 1 cut(s) 42
BstHHI GCGC 1 cut(s) 41
BstKTI GATC 8 cut(s) 163, 175, 214, 431, 689, 787, 1395, 1500
BstMAI GTCTC 2 cut(s) 446, 776
BstMBI GATC 8 cut(s) 160, 172, 211, 428, 686, 784, 1392, 1497
BstMCI CGRYCG 1 cut(s) 1439
BstMWI GCNNNNNNNGC 4 cut(s) 751, 760, 1574, 1577
BstNI CCWGG 1 cut(s) 438
BstPI GGTNACC 1 cut(s) 470
BstSCI CCNGG 3 cut(s) 436, 1433, 1438
BstSFI CTRYAG 2 cut(s) 747, 1539
BstSLI GKGCMC 2 cut(s) 960, 1476
BstV1I GCAGC 7 cut(s) 48, 471, 486, 1552, 1555, 1564, 1567
BstV2I GAAGAC 1 cut(s) 1341
BstX2I RGATCY 4 cut(s) 160, 172, 686, 784
BstYI RGATCY 4 cut(s) 160, 172, 686, 784
BstZI CGGCCG 1 cut(s) 1436
BsuRI GGCC 5 cut(s) 256, 885, 1433, 1438, 1488
BtrI CACGTC 1 cut(s) 1388
BtsCI GGATG 2 cut(s) 1247, 1270
BtsIMutI CAGTG 4 cut(s) 905, 1311, 1416, 1474
Cac8I GCNNGC 2 cut(s) 646, 1522
CfoI GCGC 1 cut(s) 41
Cfr10I RCCGGY 2 cut(s) 1293, 1516
Cfr13I GGNCC 6 cut(s) 254, 334, 817, 931, 1249, 1432
CseI GACGC 1 cut(s) 551
Csp6I GTAC 2 cut(s) 62, 1423
CspAI ACCGGT 1 cut(s) 1293
CviQI GTAC 2 cut(s) 62, 1423
DdeI CTNAG 7 cut(s) 624, 966, 992, 1024, 1114, 1419, 1530
DpnI GATC 8 cut(s) 162, 174, 213, 430, 688, 786, 1394, 1499
DpnII GATC 8 cut(s) 160, 172, 211, 428, 686, 784, 1392, 1497
DraI TTTAAA 1 cut(s) 384
EaeI YGGCCR 1 cut(s) 1436
EagI CGGCCG 1 cut(s) 1436
Eam1104I CTCTTC 1 cut(s) 1229
EarI CTCTTC 1 cut(s) 1229
EclXI CGGCCG 1 cut(s) 1436
Eco130I CCWWGG 3 cut(s) 127, 417, 972
Eco24I GRGCYC 2 cut(s) 1008, 1526
Eco31I GGTCTC 1 cut(s) 446
Eco32I GATATC 1 cut(s) 861
Eco47I GGWCC 4 cut(s) 334, 817, 931, 1249
Eco52I CGGCCG 1 cut(s) 1436
Eco91I GGTNACC 1 cut(s) 470
EcoO109I RGGNCCY 2 cut(s) 334, 1249
EcoO65I GGTNACC 1 cut(s) 470
EcoRI GAATTC 2 cut(s) 453, 894
EcoRII CCWGG 1 cut(s) 436
EcoRV GATATC 1 cut(s) 861
EcoT14I CCWWGG 3 cut(s) 127, 417, 972
EcoT38I GRGCYC 2 cut(s) 1008, 1526
ErhI CCWWGG 3 cut(s) 127, 417, 972
FaqI GGGAC 1 cut(s) 1235
FbaI TGATCA 1 cut(s) 1497
Fnu4HI GCNGC 8 cut(s) 37, 257, 485, 500, 1566, 1569, 1578, 1581
FokI GGATG 2 cut(s) 1254, 1277
FriOI GRGCYC 2 cut(s) 1008, 1526
Fsp4HI GCNGC 8 cut(s) 37, 257, 485, 500, 1566, 1569, 1578, 1581
FspBI CTAG 5 cut(s) 494, 531, 548, 572, 1642
GlaI GCGC 1 cut(s) 40
GluI GCNGC 8 cut(s) 37, 257, 485, 500, 1566, 1569, 1578, 1581
HaeII RGCGCY 1 cut(s) 42
HaeIII GGCC 5 cut(s) 256, 885, 1433, 1438, 1488
HapII CCGG 4 cut(s) 1294, 1435, 1439, 1517
HgaI GACGC 1 cut(s) 551
HhaI GCGC 1 cut(s) 41
Hin1I GRCGYC 1 cut(s) 562
Hin6I GCGC 1 cut(s) 39
HinP1I GCGC 1 cut(s) 39
HindIII AAGCTT 2 cut(s) 626, 707
HinfI GANTC 8 cut(s) 187, 413, 598, 1049, 1168, 1187, 1337, 1544
HpaII CCGG 4 cut(s) 1294, 1435, 1439, 1517
HphI GGTGA 6 cut(s) 75, 299, 868, 1188, 1354, 1477
Hpy166II GTNNAC 4 cut(s) 553, 698, 1196, 1306
Hpy188I TCNGA 9 cut(s) 160, 192, 459, 678, 893, 1117, 1131, 1392, 1482
Hpy188III TCNNGA 3 cut(s) 170, 830, 1026
Hpy8I GTNNAC 4 cut(s) 553, 698, 1196, 1306
HpyAV CCTTC 4 cut(s) 84, 753, 1112, 1545
HpyCH4III ACNGT 5 cut(s) 407, 1203, 1315, 1478, 1600
HpyCH4IV ACGT 1 cut(s) 1387
HpyCH4V TGCA 9 cut(s) 36, 91, 282, 293, 487, 644, 1062, 1571, 1595
HpyF10VI GCNNNNNNNGC 4 cut(s) 751, 760, 1574, 1577
HpyF3I CTNAG 7 cut(s) 624, 966, 992, 1024, 1114, 1419, 1530
HpySE526I ACGT 1 cut(s) 1387
Hsp92I GRCGYC 1 cut(s) 562
HspAI GCGC 1 cut(s) 39
Ksp22I TGATCA 1 cut(s) 1497
Kzo9I GATC 8 cut(s) 160, 172, 211, 428, 686, 784, 1392, 1497
LmnI GCTCC 1 cut(s) 1151
Lsp1109I GCAGC 7 cut(s) 48, 471, 486, 1552, 1555, 1564, 1567
LweI GCATC 2 cut(s) 631, 1292
MaeI CTAG 5 cut(s) 494, 531, 548, 572, 1642
MaeII ACGT 1 cut(s) 1387
MaeIII GTNAC 6 cut(s) 470, 513, 794, 822, 1175, 1351
MalI GATC 8 cut(s) 162, 174, 213, 430, 688, 786, 1394, 1499
MboI GATC 8 cut(s) 160, 172, 211, 428, 686, 784, 1392, 1497
MfeI CAATTG 2 cut(s) 349, 873
MflI RGATCY 4 cut(s) 160, 172, 686, 784
MhlI GDGCHC 5 cut(s) 960, 1008, 1072, 1476, 1526
MlyI GAGTC 3 cut(s) 181, 1331, 1538
MmeI TCCRAC 3 cut(s) 888, 1207, 1491
MseI TTAA 5 cut(s) 329, 383, 632, 716, 1107
MslI CAYNNNNRTG 1 cut(s) 1505
MspI CCGG 4 cut(s) 1294, 1435, 1439, 1517
MspR9I CCNGG 3 cut(s) 438, 1435, 1440
MunI CAATTG 2 cut(s) 349, 873
MvaI CCWGG 1 cut(s) 438
MwoI GCNNNNNNNGC 4 cut(s) 751, 760, 1574, 1577
NciI CCSGG 2 cut(s) 1435, 1440
NdeII GATC 8 cut(s) 160, 172, 211, 428, 686, 784, 1392, 1497
NlaIV GGNNCC 2 cut(s) 1251, 1515
NmuCI GTSAC 1 cut(s) 822
PcsI WCGNNNNNNNCGW 1 cut(s) 1388
PfeI GAWTC 5 cut(s) 413, 598, 1049, 1168, 1187
PinAI ACCGGT 1 cut(s) 1293
PkrI GCNGC 8 cut(s) 38, 258, 486, 501, 1567, 1570, 1579, 1582
PleI GAGTC 3 cut(s) 181, 1331, 1538
PpsI GAGTC 3 cut(s) 181, 1331, 1538
PpuMI RGGWCCY 2 cut(s) 334, 1249
PsiI TTATAA 1 cut(s) 245
Psp5II RGGWCCY 2 cut(s) 334, 1249
Psp6I CCWGG 1 cut(s) 436
PspEI GGTNACC 1 cut(s) 470
PspGI CCWGG 1 cut(s) 436
PspN4I GGNNCC 2 cut(s) 1251, 1515
PspPI GGNCC 6 cut(s) 254, 334, 817, 931, 1249, 1432
PspPPI RGGWCCY 2 cut(s) 334, 1249
PsuI RGATCY 4 cut(s) 160, 172, 686, 784
RsaI GTAC 2 cut(s) 63, 1424
RsaNI GTAC 2 cut(s) 62, 1423
RseI CAYNNNNRTG 1 cut(s) 1505
SaqAI TTAA 5 cut(s) 329, 383, 632, 716, 1107
SatI GCNGC 8 cut(s) 37, 257, 485, 500, 1566, 1569, 1578, 1581
Sau3AI GATC 8 cut(s) 160, 172, 211, 428, 686, 784, 1392, 1497
Sau96I GGNCC 6 cut(s) 254, 334, 817, 931, 1249, 1432
SchI GAGTC 3 cut(s) 181, 1331, 1538
ScrFI CCNGG 3 cut(s) 438, 1435, 1440
SduI GDGCHC 5 cut(s) 960, 1008, 1072, 1476, 1526
SfaNI GCATC 2 cut(s) 631, 1292
SfcI CTRYAG 2 cut(s) 747, 1539
SinI GGWCC 4 cut(s) 334, 817, 931, 1249
SmiMI CAYNNNNRTG 1 cut(s) 1505
SmlI CTYRAG 2 cut(s) 320, 556
SmoI CTYRAG 2 cut(s) 320, 556
SsiI CCGC 2 cut(s) 257, 1628
SspMI CTAG 5 cut(s) 494, 531, 548, 572, 1642
StyD4I CCNGG 3 cut(s) 436, 1433, 1438
StyI CCWWGG 3 cut(s) 127, 417, 972
TaaI ACNGT 5 cut(s) 407, 1203, 1315, 1478, 1600
TaiI ACGT 1 cut(s) 1390
TaqI TCGA 1 cut(s) 427
TatI WGTACW 2 cut(s) 61, 1422
TauI GCSGC 1 cut(s) 259
TfiI GAWTC 5 cut(s) 413, 598, 1049, 1168, 1187
Tru1I TTAA 5 cut(s) 329, 383, 632, 716, 1107
Tru9I TTAA 5 cut(s) 329, 383, 632, 716, 1107
TscAI CASTG 4 cut(s) 905, 1318, 1423, 1481
TseFI GTSAC 1 cut(s) 822
TseI GCWGC 7 cut(s) 36, 484, 499, 1565, 1568, 1577, 1580
Tsp45I GTSAC 1 cut(s) 822
TspDTI ATGAA 5 cut(s) 17, 657, 998, 1307, 1444
TspGWI ACGGA 1 cut(s) 1370
TspRI CASTG 4 cut(s) 905, 1318, 1423, 1481
VpaK11BI GGWCC 4 cut(s) 334, 817, 931, 1249
XapI RAATTY 6 cut(s) 296, 453, 801, 894, 924, 1109
XspI CTAG 5 cut(s) 494, 531, 548, 572, 1642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.