Rh2DG277300

Early nodulin-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
31249250 .. 31251363
2114 bp
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UTR
Exon/CDS
Intron
Rh2DG277300.1

Sequence Viewer

Length: 225 bp
ATGATTGTCAAAGTCTTGGGATCACCGGCTGCTGGAACAGAAAGCCCACCACCTGCTCAATCAGCAAACCAGAATGCAACTGAATCACCAGATCATCATGACATGAAGAACAATGCAGTTGCAATGCATGCTGTAGCTGCCATCTCTTTTACAAGTTCTGTAATATCATTTCTTAAGGAAAGAGATCCATCTACTGATTTCAGACATCTTTCCAATGCCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

74

Amino Acids

7.86

Weight (kDa)

6.0

Isoelectric Point (pI)

61.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 61
Acc36I ACCTGC 1 cut(s) 61
AclWI GGATC 2 cut(s) 28, 179
AfiI CCNNNNNNNGG 1 cut(s) 32
AflII CTTAAG 1 cut(s) 173
AluBI AGCT 1 cut(s) 137
AluI AGCT 1 cut(s) 137
AlwI GGATC 2 cut(s) 28, 179
ApeKI GCWGC 2 cut(s) 29, 137
AsuHPI GGTGA 2 cut(s) 15, 78
BbvI GCAGC 2 cut(s) 16, 124
BccI CCATC 2 cut(s) 149, 196
BfmI CTRYAG 1 cut(s) 132
BfrI CTTAAG 1 cut(s) 173
BfuAI ACCTGC 1 cut(s) 61
BisI GCNGC 2 cut(s) 30, 138
BlsI GCNGC 2 cut(s) 31, 139
Bsc4I CCNNNNNNNGG 1 cut(s) 32
Bse118I RCCGGY 1 cut(s) 25
Bse3DI GCAATG 1 cut(s) 129
BseLI CCNNNNNNNGG 1 cut(s) 32
BseMI GCAATG 1 cut(s) 129
BseXI GCAGC 2 cut(s) 16, 124
BsiSI CCGG 1 cut(s) 26
BslI CCNNNNNNNGG 1 cut(s) 32
BsmI GAATGC 1 cut(s) 79
Bsp143I GATC 3 cut(s) 20, 91, 184
BspHI TCATGA 1 cut(s) 97
BspMI ACCTGC 1 cut(s) 61
BspPI GGATC 2 cut(s) 28, 179
BspTI CTTAAG 1 cut(s) 173
BsrDI GCAATG 1 cut(s) 129
BsrFI RCCGGY 1 cut(s) 25
BssAI RCCGGY 1 cut(s) 25
BssMI GATC 3 cut(s) 20, 91, 184
BstAFI CTTAAG 1 cut(s) 173
BstAPI GCANNNNNTGC 1 cut(s) 128
BstC8I GCNNGC 1 cut(s) 129
BstKTI GATC 3 cut(s) 23, 94, 187
BstMBI GATC 3 cut(s) 20, 91, 184
BstMWI GCNNNNNNNGC 3 cut(s) 62, 128, 137
BstNSI RCATGY 1 cut(s) 131
BstSFI CTRYAG 1 cut(s) 132
BstV1I GCAGC 2 cut(s) 16, 124
BstX2I RGATCY 1 cut(s) 184
BstYI RGATCY 1 cut(s) 184
BveI ACCTGC 1 cut(s) 61
Cac8I GCNNGC 1 cut(s) 129
CciI TCATGA 1 cut(s) 97
Cfr10I RCCGGY 1 cut(s) 25
CviAII CATG 3 cut(s) 98, 103, 128
CviJI RGCY 3 cut(s) 29, 45, 137
CviKI_1 RGCY 3 cut(s) 29, 45, 137
DpnI GATC 3 cut(s) 22, 93, 186
DpnII GATC 3 cut(s) 20, 91, 184
EcoT22I ATGCAT 1 cut(s) 129
FaeI CATG 3 cut(s) 101, 106, 131
FaiI YATR 3 cut(s) 99, 104, 129
FatI CATG 3 cut(s) 97, 102, 127
Fnu4HI GCNGC 2 cut(s) 30, 138
Fsp4HI GCNGC 2 cut(s) 30, 138
GluI GCNGC 2 cut(s) 30, 138
HapII CCGG 1 cut(s) 26
Hin1II CATG 3 cut(s) 101, 106, 131
HinfI GANTC 1 cut(s) 83
HpaII CCGG 1 cut(s) 26
HphI GGTGA 2 cut(s) 15, 78
Hpy188I TCNGA 1 cut(s) 203
Hpy188III TCNNGA 1 cut(s) 98
HpyCH4V TGCA 4 cut(s) 77, 116, 122, 127
HpyF10VI GCNNNNNNNGC 3 cut(s) 62, 128, 137
Hsp92II CATG 3 cut(s) 101, 106, 131
Kzo9I GATC 3 cut(s) 20, 91, 184
LpnPI CCDG 5 cut(s) 18, 39, 66, 83, 102
Lsp1109I GCAGC 2 cut(s) 16, 124
MalI GATC 3 cut(s) 22, 93, 186
MboI GATC 3 cut(s) 20, 91, 184
MboII GAAGA 1 cut(s) 118
MflI RGATCY 1 cut(s) 184
Mph1103I ATGCAT 1 cut(s) 129
MseI TTAA 1 cut(s) 174
MspCI CTTAAG 1 cut(s) 173
MspI CCGG 1 cut(s) 26
Mva1269I GAATGC 1 cut(s) 79
MwoI GCNNNNNNNGC 3 cut(s) 62, 128, 137
NdeII GATC 3 cut(s) 20, 91, 184
NlaIII CATG 3 cut(s) 101, 106, 131
NsiI ATGCAT 1 cut(s) 129
NspI RCATGY 1 cut(s) 131
PaeI GCATGC 1 cut(s) 131
PagI TCATGA 1 cut(s) 97
PaqCI CACCTGC 1 cut(s) 61
PctI GAATGC 1 cut(s) 79
PfeI GAWTC 1 cut(s) 83
PkrI GCNGC 2 cut(s) 31, 139
PsuI RGATCY 1 cut(s) 184
SaqAI TTAA 1 cut(s) 174
SatI GCNGC 2 cut(s) 30, 138
Sau3AI GATC 3 cut(s) 20, 91, 184
SetI ASST 2 cut(s) 55, 139
SfcI CTRYAG 1 cut(s) 132
SmlI CTYRAG 1 cut(s) 173
SmoI CTYRAG 1 cut(s) 173
SphI GCATGC 1 cut(s) 131
TfiI GAWTC 1 cut(s) 83
Tru1I TTAA 1 cut(s) 174
Tru9I TTAA 1 cut(s) 174
TseI GCWGC 2 cut(s) 29, 137
TspDTI ATGAA 1 cut(s) 119
Vha464I CTTAAG 1 cut(s) 173
XceI RCATGY 1 cut(s) 131
Zsp2I ATGCAT 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.