Rmu_sc0001879.1_g000041

Exportin 1-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001879.1
Physical Location & Seq
Reverse (-)
154789 .. 156417
1629 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001879.1_g000041.1.cds

Sequence Viewer

Length: 1581 bp
atgtcagtgactggtattaatagtgggtgcatgaatttgcaccatgatcaggggcttgtctctagtggaattgaatttaatattttcttggtgaatagaagtgatgaatgcatagttatctttttctctaacttgctccaaaggatgaacaacttgcagccatatgttgacgcagtacacaaaggaattaatcatgtgattcacacttctctaagttttaaagcagtagtagatttgtctatatgtgctaacattgaagttggtattgtcactgctctgaactcttggttgattggtcatcttttgtgtctacttctagagaacaaattggagacaatgagtttattttttgctgataagtttgagaaaagggaagggaataccggaatgatgtttgatgacatttgggaaagatggaaatctatagtaattgctgcaattaagtactgtactgaagatgattctatgttcaatgacaaccaaagaacactggagttgcctgatggccttatttattttagaacgactcttgtggagctgttagtggataattgtcagcttttaagatctactacatttgtacctaagtgtttctctggtggttgggcctctgcaaatgcaccaatatcttcgaaggatgtggaaatcaagttatttgctcttaatgtgatcgcggagttgatggtttggtccattaggcctttggatgaactgaagggtagtgtgtgcactctgcatagatctcttgcagacgttgttgactcctattctatgtggatctctatttttcaaacaattgctagacccttgttgttatttcttgctgctggaatatcagaaaccttatcctcgagttcttgtgcatctgcatggcgtaatttttttgaagatgcctctgcagtgatgtatgatccttcaaatttggagatattgatggggataggagagggtctcgagaacattcatttacctttggaagatgaggaagaagttgttagtgcagttagtctgatctgtggttctattaataacaaagaattaatgagaaacttattggctagattgctttcttctagctttgaagctattgggaaatttgttgataacaatcattgcctccgacaaaaaactgccacctatacacaaattttgaatgctggtgctggagagatttacaggatgggaattgtattcaaccatcttgtaacatcagggcagagtgcatattctggagatagttgtatgcttgtgctattgcaagtgttttggcaaatgctagataaacttttcaggtctgagcacatggaaaatgatgggaagaaaaaaagatttgtgcaagagatctacggaaaatgtgctccacttgcaattattccaatagattcagaagaagatgaacaaccattgtttctcaatttcgttttgcaggtccttgatttctctacttatttagatgataatcttgacaccttagcccatgatcttggtgacaatagccatgctgctcttcattgcattgacaccactgttgttgagatgttgaacacaagtgttgttggttggcttcatcttattctctga

Protein Analysis

526

Amino Acids

58.87

Weight (kDa)

4.8

Isoelectric Point (pI)

40.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1417
AccI GTMKAC 1 cut(s) 310
AccII CGCG 1 cut(s) 674
AciI CCGC 1 cut(s) 674
AclWI GGATC 2 cut(s) 785, 905
AcsI RAATTY 5 cut(s) 34, 74, 919, 1094, 1146
AcuI CTGAAG 2 cut(s) 474, 734
AfaI GTAC 4 cut(s) 177, 446, 451, 582
AfiI CCNNNNNNNGG 1 cut(s) 49
AluBI AGCT 4 cut(s) 538, 559, 1077, 1085
AluI AGCT 4 cut(s) 538, 559, 1077, 1085
Alw21I GWGCWC 3 cut(s) 731, 1302, 1360
Alw26I GTCTC 3 cut(s) 64, 326, 956
Alw44I GTGCAC 1 cut(s) 727
AlwI GGATC 2 cut(s) 785, 905
AlwNI CAGNNNCTG 1 cut(s) 11
Ama87I CYCGRG 2 cut(s) 850, 953
AoxI GGCC 3 cut(s) 505, 606, 698
ApaLI GTGCAC 1 cut(s) 727
ApeKI GCWGC 4 cut(s) 157, 434, 824, 1502
ApoI RAATTY 5 cut(s) 34, 74, 919, 1094, 1146
AseI ATTAAT 4 cut(s) 18, 189, 1026, 1040
AspS9I GGNCC 3 cut(s) 606, 690, 1429
AsuHPI GGTGA 2 cut(s) 103, 1499
AsuII TTCGAA 1 cut(s) 632
AvaI CYCGRG 2 cut(s) 850, 953
AvaII GGWCC 2 cut(s) 690, 1429
BaeGI GKGCMC 1 cut(s) 731
BaeI ACNNNNGTAYC 2 cut(s) 564, 597
Bbv12I GWGCWC 3 cut(s) 731, 1302, 1360
BbvI GCAGC 4 cut(s) 169, 421, 811, 1489
BccI CCATC 7 cut(s) 408, 497, 676, 928, 1174, 1206, 1307
BclI TGATCA 1 cut(s) 46
BcoDI GTCTC 3 cut(s) 64, 326, 956
BfaI CTAG 6 cut(s) 63, 317, 801, 1059, 1074, 1277
BfmI CTRYAG 2 cut(s) 423, 897
BfuAI ACCTGC 1 cut(s) 1417
BglII AGATCT 3 cut(s) 566, 740, 1341
BisI GCNGC 4 cut(s) 158, 435, 825, 1503
BlsI GCNGC 4 cut(s) 159, 436, 826, 1504
BmcAI AGTACT 1 cut(s) 446
Bme18I GGWCC 2 cut(s) 690, 1429
BmeT110I CYCGRG 2 cut(s) 850, 953
BmgT120I GGNCC 3 cut(s) 606, 690, 1429
BmsI GCATC 2 cut(s) 872, 880
BplI GAGNNNNNCTC 2 cut(s) 936, 968
BpmI CTGGAG 3 cut(s) 512, 1185, 1251
Bpu10I CCTNAGC 1 cut(s) 1471
Bpu14I TTCGAA 1 cut(s) 632
BsaBI GATNNNNATC 3 cut(s) 418, 1107, 1458
BsaI GGTCTC 1 cut(s) 956
BsaWI WCCGGW 1 cut(s) 383
Bsc4I CCNNNNNNNGG 1 cut(s) 49
Bse1I ACTGG 2 cut(s) 16, 495
Bse3DI GCAATG 2 cut(s) 1111, 1510
Bse8I GATNNNNATC 3 cut(s) 418, 1107, 1458
BseGI GGATG 4 cut(s) 150, 643, 712, 1185
BseJI GATNNNNATC 3 cut(s) 418, 1107, 1458
BseLI CCNNNNNNNGG 1 cut(s) 49
BseMI GCAATG 2 cut(s) 1111, 1510
BseMII CTCAG 1 cut(s) 1287
BseNI ACTGG 2 cut(s) 16, 495
BseSI GKGCMC 1 cut(s) 731
BseXI GCAGC 4 cut(s) 169, 421, 811, 1489
BsgI GTGCAG 1 cut(s) 1020
Bsh1236I CGCG 1 cut(s) 674
BshFI GGCC 3 cut(s) 507, 608, 700
BsiHKAI GWGCWC 3 cut(s) 731, 1302, 1360
BsiHKCI CYCGRG 2 cut(s) 850, 953
BsiSI CCGG 1 cut(s) 384
BslI CCNNNNNNNGG 1 cut(s) 49
BsmAI GTCTC 3 cut(s) 64, 326, 956
BsmI GAATGC 2 cut(s) 113, 1159
BsnI GGCC 3 cut(s) 507, 608, 700
Bso31I GGTCTC 1 cut(s) 956
BsoBI CYCGRG 2 cut(s) 850, 953
Bsp119I TTCGAA 1 cut(s) 632
Bsp1286I GDGCHC 3 cut(s) 731, 1302, 1360
Bsp143I GATC 9 cut(s) 46, 566, 669, 740, 777, 910, 1011, 1341, 1480
BspACI CCGC 1 cut(s) 674
BspANI GGCC 3 cut(s) 507, 608, 700
BspCNI CTCAG 1 cut(s) 1288
BspFNI CGCG 1 cut(s) 674
BspMAI CTGCAG 1 cut(s) 901
BspMI ACCTGC 1 cut(s) 1417
BspPI GGATC 2 cut(s) 785, 905
BspQI GCTCTTC 1 cut(s) 1512
BspT104I TTCGAA 1 cut(s) 632
BspTNI GGTCTC 1 cut(s) 956
BsrDI GCAATG 2 cut(s) 1111, 1510
BsrI ACTGG 2 cut(s) 16, 495
BssMI GATC 9 cut(s) 46, 566, 669, 740, 777, 910, 1011, 1341, 1480
Bst4CI ACNGT 2 cut(s) 449, 1528
Bst6I CTCTTC 1 cut(s) 1512
BstBI TTCGAA 1 cut(s) 632
BstDEI CTNAG 4 cut(s) 212, 585, 1296, 1471
BstF5I GGATG 4 cut(s) 150, 643, 712, 1185
BstFNI CGCG 1 cut(s) 674
BstKTI GATC 9 cut(s) 49, 569, 672, 743, 780, 913, 1014, 1344, 1483
BstMAI GTCTC 3 cut(s) 64, 326, 956
BstMBI GATC 9 cut(s) 46, 566, 669, 740, 777, 910, 1011, 1341, 1480
BstMWI GCNNNNNNNGC 1 cut(s) 1364
BstSFI CTRYAG 2 cut(s) 423, 897
BstSLI GKGCMC 1 cut(s) 731
BstUI CGCG 1 cut(s) 674
BstV1I GCAGC 4 cut(s) 169, 421, 811, 1489
BstX2I RGATCY 4 cut(s) 566, 740, 777, 1341
BstXI CCANNNNNNTGG 1 cut(s) 1484
BstYI RGATCY 4 cut(s) 566, 740, 777, 1341
BsuRI GGCC 3 cut(s) 507, 608, 700
BtsCI GGATG 4 cut(s) 150, 643, 712, 1185
BtsI GCAGTG 2 cut(s) 270, 906
BtsIMutI CAGTG 5 cut(s) 12, 270, 488, 906, 1524
BveI ACCTGC 1 cut(s) 1417
CaiI CAGNNNCTG 1 cut(s) 11
Cfr13I GGNCC 3 cut(s) 606, 690, 1429
CseI GACGC 1 cut(s) 179
Csp6I GTAC 4 cut(s) 176, 445, 450, 581
CspCI CAANNNNNGTGG 2 cut(s) 1513, 1548
CviAII CATG 7 cut(s) 31, 44, 194, 870, 1303, 1478, 1499
CviQI GTAC 4 cut(s) 176, 445, 450, 581
DdeI CTNAG 4 cut(s) 212, 585, 1296, 1471
DpnI GATC 9 cut(s) 48, 568, 671, 742, 779, 912, 1013, 1343, 1482
DpnII GATC 9 cut(s) 46, 566, 669, 740, 777, 910, 1011, 1341, 1480
DraI TTTAAA 1 cut(s) 220
Eam1104I CTCTTC 1 cut(s) 1512
EarI CTCTTC 1 cut(s) 1512
Eco147I AGGCCT 1 cut(s) 700
Eco31I GGTCTC 1 cut(s) 956
Eco47I GGWCC 2 cut(s) 690, 1429
Eco57I CTGAAG 2 cut(s) 474, 734
Eco88I CYCGRG 2 cut(s) 850, 953
EcoO109I RGGNCCY 1 cut(s) 1429
EcoT22I ATGCAT 1 cut(s) 113
FaeI CATG 7 cut(s) 34, 47, 197, 873, 1306, 1481, 1502
FatI CATG 7 cut(s) 30, 43, 193, 869, 1302, 1477, 1498
FauNDI CATATG 1 cut(s) 163
FbaI TGATCA 1 cut(s) 46
FblI GTMKAC 1 cut(s) 310
Fnu4HI GCNGC 4 cut(s) 158, 435, 825, 1503
FokI GGATG 4 cut(s) 157, 650, 719, 1192
Fsp4HI GCNGC 4 cut(s) 158, 435, 825, 1503
FspBI CTAG 6 cut(s) 63, 317, 801, 1059, 1074, 1277
GluI GCNGC 4 cut(s) 158, 435, 825, 1503
GsuI CTGGAG 3 cut(s) 512, 1185, 1251
HaeIII GGCC 3 cut(s) 507, 608, 700
HapII CCGG 1 cut(s) 384
HgaI GACGC 1 cut(s) 179
Hin1II CATG 7 cut(s) 34, 47, 197, 873, 1306, 1481, 1502
HincII GTYRAC 2 cut(s) 169, 760
HindII GTYRAC 2 cut(s) 169, 760
HinfI GANTC 5 cut(s) 199, 461, 526, 761, 1382
HpaII CCGG 1 cut(s) 384
HphI GGTGA 2 cut(s) 103, 1499
Hpy166II GTNNAC 5 cut(s) 169, 178, 311, 729, 760
Hpy188I TCNGA 7 cut(s) 279, 838, 1011, 1121, 1297, 1387, 1580
Hpy188III TCNNGA 5 cut(s) 317, 953, 955, 1230, 1463
Hpy8I GTNNAC 5 cut(s) 169, 178, 311, 729, 760
HpyAV CCTTC 4 cut(s) 368, 628, 709, 924
HpyCH4III ACNGT 2 cut(s) 449, 1528
HpyCH4IV ACGT 1 cut(s) 753
HpyF10VI GCNNNNNNNGC 1 cut(s) 1364
HpyF3I CTNAG 4 cut(s) 212, 585, 1296, 1471
HpySE526I ACGT 1 cut(s) 753
Hsp92II CATG 7 cut(s) 34, 47, 197, 873, 1306, 1481, 1502
Ksp22I TGATCA 1 cut(s) 46
Kzo9I GATC 9 cut(s) 46, 566, 669, 740, 777, 910, 1011, 1341, 1480
LguI GCTCTTC 1 cut(s) 1512
LmnI GCTCC 3 cut(s) 141, 535, 1363
Lsp1109I GCAGC 4 cut(s) 169, 421, 811, 1489
LweI GCATC 2 cut(s) 872, 880
MaeI CTAG 6 cut(s) 63, 317, 801, 1059, 1074, 1277
MaeII ACGT 1 cut(s) 753
MaeIII GTNAC 4 cut(s) 7, 268, 1204, 1487
MalI GATC 9 cut(s) 48, 568, 671, 742, 779, 912, 1013, 1343, 1482
MboI GATC 9 cut(s) 46, 566, 669, 740, 777, 910, 1011, 1341, 1480
MfeI CAATTG 1 cut(s) 795
MflI RGATCY 4 cut(s) 566, 740, 777, 1341
MhlI GDGCHC 3 cut(s) 731, 1302, 1360
MlyI GAGTC 2 cut(s) 520, 755
MmeI TCCRAC 1 cut(s) 1144
MnlI CCTC 6 cut(s) 619, 859, 904, 940, 976, 1127
Mph1103I ATGCAT 1 cut(s) 113
MseI TTAA 9 cut(s) 18, 78, 189, 219, 441, 563, 663, 1026, 1040
MslI CAYNNNNRTG 1 cut(s) 868
MspI CCGG 1 cut(s) 384
MunI CAATTG 1 cut(s) 795
Mva1269I GAATGC 2 cut(s) 113, 1159
MvnI CGCG 1 cut(s) 674
MwoI GCNNNNNNNGC 1 cut(s) 1364
NdeI CATATG 1 cut(s) 163
NdeII GATC 9 cut(s) 46, 566, 669, 740, 777, 910, 1011, 1341, 1480
NlaIII CATG 7 cut(s) 34, 47, 197, 873, 1306, 1481, 1502
NmuCI GTSAC 3 cut(s) 7, 268, 1487
NsiI ATGCAT 1 cut(s) 113
NspV TTCGAA 1 cut(s) 632
PaeR7I CTCGAG 2 cut(s) 850, 953
PceI AGGCCT 1 cut(s) 700
PciSI GCTCTTC 1 cut(s) 1512
PctI GAATGC 2 cut(s) 113, 1159
PfeI GAWTC 3 cut(s) 199, 461, 1382
PkrI GCNGC 4 cut(s) 159, 436, 826, 1504
PleI GAGTC 2 cut(s) 520, 755
PpsI GAGTC 2 cut(s) 520, 755
PpuMI RGGWCCY 1 cut(s) 1429
PshBI ATTAAT 4 cut(s) 18, 189, 1026, 1040
Psp5II RGGWCCY 1 cut(s) 1429
PspPI GGNCC 3 cut(s) 606, 690, 1429
PspPPI RGGWCCY 1 cut(s) 1429
PspXI VCTCGAGB 1 cut(s) 850
PstI CTGCAG 1 cut(s) 901
PstNI CAGNNNCTG 1 cut(s) 11
PsuI RGATCY 4 cut(s) 566, 740, 777, 1341
RsaI GTAC 4 cut(s) 177, 446, 451, 582
RsaNI GTAC 4 cut(s) 176, 445, 450, 581
RseI CAYNNNNRTG 1 cut(s) 868
SapI GCTCTTC 1 cut(s) 1512
SaqAI TTAA 9 cut(s) 18, 78, 189, 219, 441, 563, 663, 1026, 1040
SatI GCNGC 4 cut(s) 158, 435, 825, 1503
Sau3AI GATC 9 cut(s) 46, 566, 669, 740, 777, 910, 1011, 1341, 1480
Sau96I GGNCC 3 cut(s) 606, 690, 1429
ScaI AGTACT 1 cut(s) 446
SchI GAGTC 2 cut(s) 520, 755
SduI GDGCHC 3 cut(s) 731, 1302, 1360
SfaNI GCATC 2 cut(s) 872, 880
SfcI CTRYAG 2 cut(s) 423, 897
Sfr274I CTCGAG 2 cut(s) 850, 953
SfuI TTCGAA 1 cut(s) 632
SinI GGWCC 2 cut(s) 690, 1429
SlaI CTCGAG 2 cut(s) 850, 953
SmiMI CAYNNNNRTG 1 cut(s) 868
SmlI CTYRAG 2 cut(s) 850, 953
SmoI CTYRAG 2 cut(s) 850, 953
SseBI AGGCCT 1 cut(s) 700
SsiI CCGC 1 cut(s) 674
SspI AATATT 1 cut(s) 82
SspMI CTAG 6 cut(s) 63, 317, 801, 1059, 1074, 1277
StuI AGGCCT 1 cut(s) 700
TaaI ACNGT 2 cut(s) 449, 1528
TaiI ACGT 1 cut(s) 756
TaqI TCGA 3 cut(s) 632, 851, 954
TatI WGTACW 3 cut(s) 175, 444, 449
TfiI GAWTC 3 cut(s) 199, 461, 1382
Tru1I TTAA 9 cut(s) 18, 78, 189, 219, 441, 563, 663, 1026, 1040
Tru9I TTAA 9 cut(s) 18, 78, 189, 219, 441, 563, 663, 1026, 1040
TscAI CASTG 5 cut(s) 12, 277, 495, 906, 1531
TseFI GTSAC 3 cut(s) 7, 268, 1487
TseI GCWGC 4 cut(s) 157, 434, 824, 1502
Tsp45I GTSAC 3 cut(s) 7, 268, 1487
TspDTI ATGAA 8 cut(s) 47, 120, 161, 723, 953, 1410, 1499, 1556
TspGWI ACGGA 1 cut(s) 1362
TspRI CASTG 5 cut(s) 12, 277, 495, 906, 1531
VneI GTGCAC 1 cut(s) 727
VpaK11BI GGWCC 2 cut(s) 690, 1429
VspI ATTAAT 4 cut(s) 18, 189, 1026, 1040
XapI RAATTY 5 cut(s) 34, 74, 919, 1094, 1146
XbaI TCTAGA 1 cut(s) 316
XcmI CCANNNNNNNNNTGG 1 cut(s) 700
XhoI CTCGAG 2 cut(s) 850, 953
XmiI GTMKAC 1 cut(s) 310
XspI CTAG 6 cut(s) 63, 317, 801, 1059, 1074, 1277
ZrmI AGTACT 1 cut(s) 446
Zsp2I ATGCAT 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.