Rh4AG144100

Belongs to the pyruvate kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0001739
Physical Location & Seq
Forward (+)
36462044 .. 36462650
607 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG144100.1

Sequence Viewer

Length: 207 bp
ATGTTCACTGTTAGATCAGTGAGGATCACCCAGCAGAGCAGTGAAGGCAATCCTAGCTCACCCAATGGTCCTATGGGTGGTGTTGGGGTGAACTCGACTTATGAAATTCAGTCTGATGATGATTACGAAGTGGGTCAGGGAAGGGCATTTACAAGTGGTCGAAGAAAAACTAAGATTGTCTGTACAATTGGTCCTTCCACAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000287 GO:0003006 GO:0003674 GO:0003824 GO:0004743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009791 GO:0009987 GO:0010154 GO:0010431 GO:0016052 GO:0016053 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019752 GO:0021700 GO:0022414 GO:0030955 GO:0031420 GO:0032501 GO:0032502 GO:0032504 GO:0032787 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042866 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046031 GO:0046034 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046872 GO:0046939 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0051186 GO:0051188 GO:0055086 GO:0061458 GO:0071695 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00010 ko00230 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko04922 ko04930 ko05165 ko05203 ko05230 map00010 map00230 map00620 map01100 map01110 map01120 map01130 map01200 map01230 map04922 map04930 map05165 map05203 map05230
Pfam Domains
Protein Families
PK PK_C

Protein Analysis

68

Amino Acids

7.23

Weight (kDa)

7.92

Isoelectric Point (pI)

57.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 32
AcsI RAATTY 1 cut(s) 105
AfaI GTAC 1 cut(s) 184
AfiI CCNNNNNNNGG 1 cut(s) 77
AluBI AGCT 2 cut(s) 57, 204
AluI AGCT 2 cut(s) 57, 204
AlwI GGATC 1 cut(s) 32
ApoI RAATTY 1 cut(s) 105
AspS9I GGNCC 2 cut(s) 68, 191
AsuHPI GGTGA 3 cut(s) 19, 51, 100
AvaII GGWCC 2 cut(s) 68, 191
BarI GAAGNNNNNNTAC 2 cut(s) 133, 165
BfaI CTAG 1 cut(s) 54
Bme18I GGWCC 2 cut(s) 68, 191
BmgT120I GGNCC 2 cut(s) 68, 191
Bsc4I CCNNNNNNNGG 1 cut(s) 77
BseLI CCNNNNNNNGG 1 cut(s) 77
BseYI CCCAGC 1 cut(s) 30
BslI CCNNNNNNNGG 1 cut(s) 77
Bsp1407I TGTACA 1 cut(s) 182
Bsp143I GATC 2 cut(s) 14, 24
BspPI GGATC 1 cut(s) 32
BsrGI TGTACA 1 cut(s) 182
BssMI GATC 2 cut(s) 14, 24
Bst4CI ACNGT 1 cut(s) 10
BstAUI TGTACA 1 cut(s) 182
BstDEI CTNAG 1 cut(s) 171
BstKTI GATC 2 cut(s) 17, 27
BstMBI GATC 2 cut(s) 14, 24
BstMWI GCNNNNNNNGC 2 cut(s) 45, 54
BtsI GCAGTG 1 cut(s) 46
BtsIMutI CAGTG 3 cut(s) 6, 24, 46
Cfr13I GGNCC 2 cut(s) 68, 191
Csp6I GTAC 1 cut(s) 183
CviJI RGCY 2 cut(s) 57, 204
CviKI_1 RGCY 2 cut(s) 57, 204
CviQI GTAC 1 cut(s) 183
DdeI CTNAG 1 cut(s) 171
DpnI GATC 2 cut(s) 16, 26
DpnII GATC 2 cut(s) 14, 24
Eco47I GGWCC 2 cut(s) 68, 191
FaiI YATR 2 cut(s) 74, 102
FspBI CTAG 1 cut(s) 54
GsaI CCCAGC 1 cut(s) 34
HphI GGTGA 3 cut(s) 19, 51, 100
Hpy166II GTNNAC 2 cut(s) 6, 91
Hpy188I TCNGA 1 cut(s) 115
Hpy8I GTNNAC 2 cut(s) 6, 91
HpyAV CCTTC 3 cut(s) 38, 135, 204
HpyCH4III ACNGT 1 cut(s) 10
HpyF10VI GCNNNNNNNGC 2 cut(s) 45, 54
HpyF3I CTNAG 1 cut(s) 171
Kzo9I GATC 2 cut(s) 14, 24
LpnPI CCDG 2 cut(s) 44, 122
MaeI CTAG 1 cut(s) 54
MalI GATC 2 cut(s) 16, 26
MboI GATC 2 cut(s) 14, 24
MboII GAAGA 1 cut(s) 174
MfeI CAATTG 1 cut(s) 186
MluCI AATT 2 cut(s) 105, 186
MnlI CCTC 1 cut(s) 15
MunI CAATTG 1 cut(s) 186
MwoI GCNNNNNNNGC 2 cut(s) 45, 54
NdeII GATC 2 cut(s) 14, 24
PspFI CCCAGC 1 cut(s) 30
PspPI GGNCC 2 cut(s) 68, 191
RsaI GTAC 1 cut(s) 184
RsaNI GTAC 1 cut(s) 183
Sau3AI GATC 2 cut(s) 14, 24
Sau96I GGNCC 2 cut(s) 68, 191
SetI ASST 2 cut(s) 59, 206
SgeI CNNG 5 cut(s) 43, 66, 106, 149, 165
SinI GGWCC 2 cut(s) 68, 191
Sse9I AATT 2 cut(s) 105, 186
SspMI CTAG 1 cut(s) 54
TaaI ACNGT 1 cut(s) 10
TaqI TCGA 2 cut(s) 95, 160
TasI AATT 2 cut(s) 105, 186
TatI WGTACW 1 cut(s) 182
TscAI CASTG 3 cut(s) 13, 24, 46
TspDTI ATGAA 1 cut(s) 117
TspRI CASTG 3 cut(s) 13, 24, 46
VpaK11BI GGWCC 2 cut(s) 68, 191
XapI RAATTY 1 cut(s) 105
XcmI CCANNNNNNNNNTGG 1 cut(s) 70
XspI CTAG 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.