Rorug07G0107100

Belongs to the pyruvate kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0001739
Physical Location & Seq
Reverse (-)
8368718 .. 8372730
4013 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0107100.1

Sequence Viewer

Length: 1437 bp
ATGGCAAAGCAAGAATCAAACTGTGTAGGAAGCTCAGTCGTCTCTGACCTCATCAACTTCCTCAACGCTTGTCCCACTGCTTTTCACGCCGTCGACGAGGCGAAGAAGCGTCTGCGAAGCGCGGGGTACGAGCAGGTTTTGGAGAGAGAGGATTGGAAATTGGAGGCTGGTAAAAAGTACTACTTCACCAGGAACTACTCCACCATTGTGGCTTTTGCAATCGGTAAAAAATTTGTTGCCGGAAATGGATTCCATATAGTTGGTGCTCATACTGATAGTCCTTGTCTCAAATTGAAGCCTGTTTCCAAGGTAGCTAAGGGTGGGTACTTGGAAGTGGGAGTCCAAACATATGGAGGTGGCTTGTGGCATACCTGGTTCGACCGTGACTTGACAATTGCAGGAAGGGTGATAGTAAGAGAAGAGAAAGATGGTGTTGTTTCTTACTCACATAGACTTGTCCGGATTGAGGAGCCCATCATGCGGATTCCTACTCTGGCAATTCACCTGGACAGGGATGTTAGAGAGGCGTTTAAGGTGAATGCACAGAGTCACCTTCTTCCTGTCTTGGCAACAGCAGTCAAGGCAGAGCTCAATAAAGTAGTTGCAGAAAGTGGCCAATCTAAGGAGACAACCTCAATTAACTCAAAGCATCACTCGCTTCTGTTACAGCTGCTTGCAGATAAGCTTGGGTGTGAACCAGAACATATAAGTGATTTTGAATTGCAAGCATGTGATACTCAACCAAGTCTAGTAGCCGGTGCAGCAAAAGAATTTATTTTCTCAGGAAGGCTTGATAATCTCTGCATGTCATTTTGTTCCCTAAAGGCATTGATAGACGCAACAGCTCCTGAAAGCAACCTTGAGGATGAGACTGGTGTTAGAATGGTGGCTTTGTTTGATCACGAGGAGGTTGGATCTGACTCCGCCCAAGGGGCTGGGTCTCCAGCCATGTTGAATACTCTTTCACGAATTACACATTCCTTTACCACAGATTCTAAGCTGCTTGAGAAAGCAATACAGAGAAGCTTTCTTGTATCTGCTGACATGGCCCATGCCTTGCATCCTAATTATATGGATAAACATGAAGACAATCATCAGCCCAAGTTGCATGGGGGACTTGTGATCAAACACAATGCAAATCAACGTTATGCAACCAATGCTGTCACTTCCTTAATATTCAGGGAGATAGCAAGGAATCACAGCCTTCCTGTCCAGGATTTTGTGGTTCGTAATGACATGGCCTGTGGTTCAACCATCGGTCCCATTCTTGCAAGTGGAGTGGGGATACGTACAGTAGACGTAGGTGCACCGCAGTTGTCAATGCACAGCATACGGGAAATGTGTGCTGTTGATGATGTGAAGCATTCATATGAGCATTTCAAGGCCTATTACCAAGAGTTCACTCATCTGGATGCAAAGATTAAAGTAGATGCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000287 GO:0003006 GO:0003674 GO:0003824 GO:0004743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009791 GO:0009987 GO:0010154 GO:0010431 GO:0016052 GO:0016053 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019752 GO:0021700 GO:0022414 GO:0030955 GO:0031420 GO:0032501 GO:0032502 GO:0032504 GO:0032787 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042866 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046031 GO:0046034 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046872 GO:0046939 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0051186 GO:0051188 GO:0055086 GO:0061458 GO:0071695 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00010 ko00230 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko04922 ko04930 ko05165 ko05203 ko05230 map00010 map00230 map00620 map01100 map01110 map01120 map01130 map01200 map01230 map04922 map04930 map05165 map05203 map05230
Pfam Domains
Protein Families
PK PK_C

Protein Analysis

478

Amino Acids

52.7

Weight (kDa)

6.45

Isoelectric Point (pI)

35.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M18 PF02127 20 - 464 4.9e-162 Aminopeptidase I zinc metalloprotease (M18)
Peptidase_M42 PF05343 335 - 456 4.9e-06 M42 glutamyl aminopeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 124
AccI GTMKAC 2 cut(s) 93, 1296
AccII CGCG 1 cut(s) 122
AccIII TCCGGA 1 cut(s) 459
AciI CCGC 4 cut(s) 122, 481, 924, 1310
AclI AACGTT 1 cut(s) 1144
AclWI GGATC 1 cut(s) 922
AcoI YGGCCR 1 cut(s) 613
AcsI RAATTY 2 cut(s) 230, 770
AfaI GTAC 4 cut(s) 128, 179, 326, 1291
AfiI CCNNNNNNNGG 5 cut(s) 466, 480, 511, 622, 930
AgsI TTSAA 5 cut(s) 295, 719, 955, 1251, 1381
AjnI CCWGG 4 cut(s) 188, 371, 504, 1212
AleI CACNNNNGTG 1 cut(s) 206
AluBI AGCT 8 cut(s) 33, 314, 589, 670, 685, 845, 1000, 1026
AluI AGCT 8 cut(s) 33, 314, 589, 670, 685, 845, 1000, 1026
Alw21I GWGCWC 3 cut(s) 268, 591, 1309
Alw26I GTCTC 5 cut(s) 46, 290, 620, 863, 945
Alw44I GTGCAC 1 cut(s) 1305
AlwI GGATC 1 cut(s) 922
AlwNI CAGNNNCTG 1 cut(s) 848
Aor13HI TCCGGA 1 cut(s) 459
AoxI GGCC 4 cut(s) 613, 1047, 1239, 1383
ApaLI GTGCAC 1 cut(s) 1305
ApeKI GCWGC 3 cut(s) 670, 761, 1000
ApoI RAATTY 2 cut(s) 230, 770
AspLEI GCGC 1 cut(s) 122
AspS9I GGNCC 2 cut(s) 1048, 1259
AsuHPI GGTGA 5 cut(s) 178, 418, 494, 542, 547
AvaII GGWCC 1 cut(s) 1259
BaeGI GKGCMC 1 cut(s) 1309
BalI TGGCCA 1 cut(s) 615
BanII GRGCYC 2 cut(s) 474, 591
BauI CACGAG 1 cut(s) 902
BbsI GAAGAC 1 cut(s) 1092
Bbv12I GWGCWC 3 cut(s) 268, 591, 1309
BbvI GCAGC 3 cut(s) 657, 773, 987
BccI CCATC 3 cut(s) 422, 482, 1262
BceAI ACGGC 1 cut(s) 74
BciT130I CCWGG 4 cut(s) 190, 373, 506, 1214
BciVI GTATCC 1 cut(s) 1278
BclI TGATCA 2 cut(s) 898, 1122
BcoDI GTCTC 5 cut(s) 46, 290, 620, 863, 945
BfaI CTAG 1 cut(s) 749
BfuAI ACCTGC 1 cut(s) 124
BfuI GTATCC 1 cut(s) 1278
BglI GCCNNNNNGGC 1 cut(s) 932
BisI GCNGC 3 cut(s) 671, 762, 1001
BlsI GCNGC 3 cut(s) 672, 763, 1002
BmcAI AGTACT 1 cut(s) 179
Bme1390I CCNGG 4 cut(s) 190, 373, 506, 1214
Bme18I GGWCC 1 cut(s) 1259
BmgT120I GGNCC 2 cut(s) 1048, 1259
BmiI GGNNCC 2 cut(s) 471, 1261
BmrFI CCNGG 4 cut(s) 190, 373, 506, 1214
BmsI GCATC 4 cut(s) 658, 1069, 1402, 1420
BpiI GAAGAC 1 cut(s) 1092
BplI GAGNNNNNCTC 2 cut(s) 617, 649
BpmI CTGGAG 1 cut(s) 927
Bpu10I CCTNAGC 1 cut(s) 315
BpuEI CTTGAG 2 cut(s) 881, 1025
BsaAI YACGTR 1 cut(s) 1289
BsaI GGTCTC 1 cut(s) 945
BsaJI CCNNGG 2 cut(s) 306, 928
BsaWI WCCGGW 1 cut(s) 459
Bsc4I CCNNNNNNNGG 5 cut(s) 466, 480, 511, 622, 930
Bse118I RCCGGY 1 cut(s) 755
Bse1I ACTGG 1 cut(s) 877
BseAI TCCGGA 1 cut(s) 459
BseBI CCWGG 4 cut(s) 190, 373, 506, 1214
BseDI CCNNGG 2 cut(s) 306, 928
BseGI GGATG 4 cut(s) 520, 871, 1060, 1417
BseLI CCNNNNNNNGG 5 cut(s) 466, 480, 511, 622, 930
BseMII CTCAG 2 cut(s) 48, 795
BseNI ACTGG 1 cut(s) 877
BseRI GAGGAG 2 cut(s) 482, 920
BseSI GKGCMC 1 cut(s) 1309
BseXI GCAGC 3 cut(s) 657, 773, 987
BseYI CCCAGC 1 cut(s) 935
BsgI GTGCAG 1 cut(s) 780
Bsh1236I CGCG 1 cut(s) 122
Bsh1285I CGRYCG 1 cut(s) 382
BshFI GGCC 4 cut(s) 615, 1049, 1241, 1385
BsiEI CGRYCG 1 cut(s) 382
BsiHKAI GWGCWC 3 cut(s) 268, 591, 1309
BsiSI CCGG 3 cut(s) 240, 460, 756
BslFI GGGAC 3 cut(s) 57, 1128, 1245
BslI CCNNNNNNNGG 5 cut(s) 466, 480, 511, 622, 930
BsmAI GTCTC 5 cut(s) 46, 290, 620, 863, 945
BsmBI CGTCTC 1 cut(s) 46
BsmFI GGGAC 3 cut(s) 57, 1128, 1245
BsmI GAATGC 2 cut(s) 544, 1363
BsnI GGCC 4 cut(s) 615, 1049, 1241, 1385
Bso31I GGTCTC 1 cut(s) 945
Bsp1286I GDGCHC 4 cut(s) 268, 474, 591, 1309
Bsp13I TCCGGA 1 cut(s) 459
Bsp143I GATC 3 cut(s) 898, 914, 1122
BspACI CCGC 4 cut(s) 122, 481, 924, 1310
BspANI GGCC 4 cut(s) 615, 1049, 1241, 1385
BspCNI CTCAG 2 cut(s) 47, 794
BspEI TCCGGA 1 cut(s) 459
BspFNI CGCG 1 cut(s) 122
BspLI GGNNCC 2 cut(s) 471, 1261
BspMI ACCTGC 1 cut(s) 124
BspPI GGATC 1 cut(s) 922
BspTNI GGTCTC 1 cut(s) 945
BsrFI RCCGGY 1 cut(s) 755
BsrI ACTGG 1 cut(s) 877
BssAI RCCGGY 1 cut(s) 755
BssECI CCNNGG 2 cut(s) 306, 928
BssMI GATC 3 cut(s) 898, 914, 1122
BssSI CACGAG 1 cut(s) 902
BssT1I CCWWGG 2 cut(s) 306, 928
Bst2BI CACGAG 1 cut(s) 902
Bst2UI CCWGG 4 cut(s) 190, 373, 506, 1214
Bst4CI ACNGT 3 cut(s) 23, 383, 1294
Bst6I CTCTTC 1 cut(s) 414
BstAPI GCANNNNNTGC 1 cut(s) 1157
BstBAI YACGTR 1 cut(s) 1289
BstC8I GCNNGC 2 cut(s) 675, 726
BstDEI CTNAG 5 cut(s) 34, 315, 621, 781, 996
BstF5I GGATG 4 cut(s) 520, 871, 1060, 1417
BstFNI CGCG 1 cut(s) 122
BstHHI GCGC 1 cut(s) 122
BstKTI GATC 3 cut(s) 901, 917, 1125
BstMAI GTCTC 5 cut(s) 46, 290, 620, 863, 945
BstMBI GATC 3 cut(s) 898, 914, 1122
BstMCI CGRYCG 1 cut(s) 382
BstMWI GCNNNNNNNGC 9 cut(s) 86, 478, 581, 655, 761, 932, 1046, 1105, 1157
BstNI CCWGG 4 cut(s) 190, 373, 506, 1214
BstNSI RCATGY 2 cut(s) 732, 808
BstSCI CCNGG 4 cut(s) 188, 371, 504, 1212
BstSLI GKGCMC 1 cut(s) 1309
BstSNI TACGTA 1 cut(s) 1289
BstUI CGCG 1 cut(s) 122
BstV1I GCAGC 3 cut(s) 657, 773, 987
BstV2I GAAGAC 1 cut(s) 1092
BstX2I RGATCY 1 cut(s) 914
BstXI CCANNNNNNTGG 4 cut(s) 208, 260, 350, 935
BstYI RGATCY 1 cut(s) 914
BsuI GTATCC 1 cut(s) 1278
BsuRI GGCC 4 cut(s) 615, 1049, 1241, 1385
BtsCI GGATG 4 cut(s) 520, 871, 1060, 1417
BtsI GCAGTG 1 cut(s) 75
BtsIMutI CAGTG 1 cut(s) 75
BveI ACCTGC 1 cut(s) 124
Cac8I GCNNGC 2 cut(s) 675, 726
CaiI CAGNNNCTG 1 cut(s) 848
CfoI GCGC 1 cut(s) 122
Cfr10I RCCGGY 1 cut(s) 755
Cfr13I GGNCC 2 cut(s) 1048, 1259
CseI GACGC 2 cut(s) 98, 845
CsiI ACCWGGT 1 cut(s) 371
Csp6I GTAC 4 cut(s) 127, 178, 325, 1290
CspCI CAANNNNNGTGG 2 cut(s) 1260, 1295
CviAII CATG 9 cut(s) 478, 729, 805, 949, 1045, 1052, 1082, 1109, 1237
CviQI GTAC 4 cut(s) 127, 178, 325, 1290
DdeI CTNAG 5 cut(s) 34, 315, 621, 781, 996
DpnI GATC 3 cut(s) 900, 916, 1124
DpnII GATC 3 cut(s) 898, 914, 1122
EaeI YGGCCR 1 cut(s) 613
Eam1104I CTCTTC 1 cut(s) 414
EarI CTCTTC 1 cut(s) 414
EciI GGCGGA 1 cut(s) 913
Ecl136II GAGCTC 1 cut(s) 589
Eco105I TACGTA 1 cut(s) 1289
Eco130I CCWWGG 2 cut(s) 306, 928
Eco147I AGGCCT 1 cut(s) 1385
Eco24I GRGCYC 2 cut(s) 474, 591
Eco31I GGTCTC 1 cut(s) 945
Eco47I GGWCC 1 cut(s) 1259
Eco53kI GAGCTC 1 cut(s) 589
EcoICRI GAGCTC 1 cut(s) 589
EcoRII CCWGG 4 cut(s) 188, 371, 504, 1212
EcoT14I CCWWGG 2 cut(s) 306, 928
EcoT38I GRGCYC 2 cut(s) 474, 591
ErhI CCWWGG 2 cut(s) 306, 928
Esp3I CGTCTC 1 cut(s) 46
FaeI CATG 9 cut(s) 481, 732, 808, 952, 1048, 1055, 1085, 1112, 1240
FalI AAGNNNNNCTT 2 cut(s) 167, 199
FaqI GGGAC 3 cut(s) 57, 1128, 1245
FatI CATG 9 cut(s) 477, 728, 804, 948, 1044, 1051, 1081, 1108, 1236
FauI CCCGC 1 cut(s) 115
FauNDI CATATG 2 cut(s) 349, 1369
FbaI TGATCA 2 cut(s) 898, 1122
FblI GTMKAC 2 cut(s) 93, 1296
Fnu4HI GCNGC 3 cut(s) 671, 762, 1001
FokI GGATG 4 cut(s) 527, 878, 1047, 1424
FriOI GRGCYC 2 cut(s) 474, 591
Fsp4HI GCNGC 3 cut(s) 671, 762, 1001
FspBI CTAG 1 cut(s) 749
GlaI GCGC 1 cut(s) 121
GluI GCNGC 3 cut(s) 671, 762, 1001
GsaI CCCAGC 1 cut(s) 939
GsuI CTGGAG 1 cut(s) 927
HaeIII GGCC 4 cut(s) 615, 1049, 1241, 1385
HapII CCGG 3 cut(s) 240, 460, 756
HgaI GACGC 2 cut(s) 98, 845
HhaI GCGC 1 cut(s) 122
Hin1II CATG 9 cut(s) 481, 732, 808, 952, 1048, 1055, 1085, 1112, 1240
Hin6I GCGC 1 cut(s) 120
HinP1I GCGC 1 cut(s) 120
HincII GTYRAC 1 cut(s) 94
HindII GTYRAC 1 cut(s) 94
HindIII AAGCTT 2 cut(s) 683, 1024
HinfI GANTC 8 cut(s) 14, 249, 339, 484, 547, 920, 992, 1195
HpaII CCGG 3 cut(s) 240, 460, 756
HphI GGTGA 5 cut(s) 178, 418, 494, 542, 547
Hpy166II GTNNAC 5 cut(s) 94, 695, 1297, 1307, 1401
Hpy188I TCNGA 2 cut(s) 46, 919
Hpy188III TCNNGA 6 cut(s) 460, 783, 848, 902, 966, 1409
Hpy8I GTNNAC 5 cut(s) 94, 695, 1297, 1307, 1401
Hpy99I CGWCG 2 cut(s) 95, 98
HpyAV CCTTC 4 cut(s) 396, 563, 780, 1214
HpyCH4III ACNGT 3 cut(s) 23, 383, 1294
HpyCH4IV ACGT 3 cut(s) 1144, 1288, 1299
HpyF10VI GCNNNNNNNGC 9 cut(s) 86, 478, 581, 655, 761, 932, 1046, 1105, 1157
HpyF3I CTNAG 5 cut(s) 34, 315, 621, 781, 996
HpySE526I ACGT 3 cut(s) 1144, 1288, 1299
Hsp92II CATG 9 cut(s) 481, 732, 808, 952, 1048, 1055, 1085, 1112, 1240
HspAI GCGC 1 cut(s) 120
Kpn2I TCCGGA 1 cut(s) 459
Ksp22I TGATCA 2 cut(s) 898, 1122
Kzo9I GATC 3 cut(s) 898, 914, 1122
LmnI GCTCC 2 cut(s) 469, 850
Lsp1109I GCAGC 3 cut(s) 657, 773, 987
LweI GCATC 4 cut(s) 658, 1069, 1402, 1420
MabI ACCWGGT 1 cut(s) 371
MaeI CTAG 1 cut(s) 749
MaeII ACGT 3 cut(s) 1144, 1288, 1299
MaeIII GTNAC 4 cut(s) 383, 548, 663, 1162
MalI GATC 3 cut(s) 900, 916, 1124
MboI GATC 3 cut(s) 898, 914, 1122
MboII GAAGA 4 cut(s) 115, 431, 548, 1097
MfeI CAATTG 1 cut(s) 393
MflI RGATCY 1 cut(s) 914
MhlI GDGCHC 4 cut(s) 268, 474, 591, 1309
MlsI TGGCCA 1 cut(s) 615
MluNI TGGCCA 1 cut(s) 615
MlyI GAGTC 3 cut(s) 348, 556, 914
MmeI TCCRAC 1 cut(s) 892
Mox20I TGGCCA 1 cut(s) 615
MroI TCCGGA 1 cut(s) 459
MscI TGGCCA 1 cut(s) 615
MseI TTAA 4 cut(s) 531, 639, 1172, 1422
MslI CAYNNNNRTG 4 cut(s) 206, 708, 1368, 1410
Msp20I TGGCCA 1 cut(s) 615
MspA1I CMGCKG 1 cut(s) 670
MspI CCGG 3 cut(s) 240, 460, 756
MspR9I CCNGG 4 cut(s) 190, 373, 506, 1214
MunI CAATTG 1 cut(s) 393
Mva1269I GAATGC 2 cut(s) 544, 1363
MvaI CCWGG 4 cut(s) 190, 373, 506, 1214
MvnI CGCG 1 cut(s) 122
MwoI GCNNNNNNNGC 9 cut(s) 86, 478, 581, 655, 761, 932, 1046, 1105, 1157
NdeI CATATG 2 cut(s) 349, 1369
NdeII GATC 3 cut(s) 898, 914, 1122
NlaIII CATG 9 cut(s) 481, 732, 808, 952, 1048, 1055, 1085, 1112, 1240
NlaIV GGNNCC 2 cut(s) 471, 1261
NmuCI GTSAC 3 cut(s) 383, 548, 1162
NspI RCATGY 2 cut(s) 732, 808
OliI CACNNNNGTG 1 cut(s) 206
PceI AGGCCT 1 cut(s) 1385
PcsI WCGNNNNNNNCGW 1 cut(s) 93
PctI GAATGC 2 cut(s) 544, 1363
PfeI GAWTC 5 cut(s) 14, 249, 484, 992, 1195
PfoI TCCNGGA 1 cut(s) 1212
PkrI GCNGC 3 cut(s) 672, 763, 1002
PleI GAGTC 3 cut(s) 347, 555, 914
PpsI GAGTC 3 cut(s) 347, 555, 914
Ppu21I YACGTR 1 cut(s) 1289
Psp124BI GAGCTC 1 cut(s) 591
Psp1406I AACGTT 1 cut(s) 1144
Psp6I CCWGG 4 cut(s) 188, 371, 504, 1212
PspFI CCCAGC 1 cut(s) 935
PspGI CCWGG 4 cut(s) 188, 371, 504, 1212
PspN4I GGNNCC 2 cut(s) 471, 1261
PspPI GGNCC 2 cut(s) 1048, 1259
PstNI CAGNNNCTG 1 cut(s) 848
PsuI RGATCY 1 cut(s) 914
PvuII CAGCTG 1 cut(s) 670
RsaI GTAC 4 cut(s) 128, 179, 326, 1291
RsaNI GTAC 4 cut(s) 127, 178, 325, 1290
RseI CAYNNNNRTG 4 cut(s) 206, 708, 1368, 1410
SacI GAGCTC 1 cut(s) 591
SalI GTCGAC 1 cut(s) 92
SaqAI TTAA 4 cut(s) 531, 639, 1172, 1422
SatI GCNGC 3 cut(s) 671, 762, 1001
Sau3AI GATC 3 cut(s) 898, 914, 1122
Sau96I GGNCC 2 cut(s) 1048, 1259
ScaI AGTACT 1 cut(s) 179
SchI GAGTC 3 cut(s) 348, 556, 914
ScrFI CCNGG 4 cut(s) 190, 373, 506, 1214
SduI GDGCHC 4 cut(s) 268, 474, 591, 1309
SexAI ACCWGGT 1 cut(s) 371
SfaNI GCATC 4 cut(s) 658, 1069, 1402, 1420
SgrDI CGTCGACG 1 cut(s) 92
SinI GGWCC 1 cut(s) 1259
SmiMI CAYNNNNRTG 4 cut(s) 206, 708, 1368, 1410
SmlI CTYRAG 2 cut(s) 860, 1004
SmoI CTYRAG 2 cut(s) 860, 1004
SnaBI TACGTA 1 cut(s) 1289
SseBI AGGCCT 1 cut(s) 1385
SsiI CCGC 4 cut(s) 122, 481, 924, 1310
SspI AATATT 1 cut(s) 1176
SspMI CTAG 1 cut(s) 749
SstI GAGCTC 1 cut(s) 591
StuI AGGCCT 1 cut(s) 1385
StyD4I CCNGG 4 cut(s) 188, 371, 504, 1212
StyI CCWWGG 2 cut(s) 306, 928
TaaI ACNGT 3 cut(s) 23, 383, 1294
TaiI ACGT 3 cut(s) 1147, 1291, 1302
TaqI TCGA 2 cut(s) 93, 378
TaqII GACCGA 1 cut(s) 1247
TatI WGTACW 1 cut(s) 177
TfiI GAWTC 5 cut(s) 14, 249, 484, 992, 1195
Tru1I TTAA 4 cut(s) 531, 639, 1172, 1422
Tru9I TTAA 4 cut(s) 531, 639, 1172, 1422
TscAI CASTG 1 cut(s) 82
TseFI GTSAC 3 cut(s) 383, 548, 1162
TseI GCWGC 3 cut(s) 670, 761, 1000
Tsp45I GTSAC 3 cut(s) 383, 548, 1162
TspDTI ATGAA 2 cut(s) 1098, 1356
TspRI CASTG 1 cut(s) 82
VneI GTGCAC 1 cut(s) 1305
VpaK11BI GGWCC 1 cut(s) 1259
XapI RAATTY 2 cut(s) 230, 770
XceI RCATGY 2 cut(s) 732, 808
XmiI GTMKAC 2 cut(s) 93, 1296
XspI CTAG 1 cut(s) 749
ZrmI AGTACT 1 cut(s) 179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.