Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001901.1

Orthogroup ID

OG0002490

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 5579

Gene Structure 5579 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2594 bp

ttgagtgggttcagtcagattcttgtgagccaactctgttgccaaccaaaagttcagcgttcccaaagtctgcactggcttttctggatgctattaataagaataggtcctgtcagaagtttcttcgaagtaagctaatacaaatccaagcgaaaattgaggagaacaacaaactgaagcagcgtgtcaaaatccttagagactttcaagctcattgcaaaagacgaacaggagaggcgctgtcccaaaagaaggatcctcgtgtccagttaattttaacgaaaaagccaagggctgattcaaaggctcatgacagagctatctcagctatgtcttatggcccagaagaaaattcacatgttgccaactacagaaaggcatcaacaaaatttccactttcattagatcgaaaaaattggtcagaggtagaaaagaaagatcttcaaaatggaataagacagcaatttcaggaaatggtgcttcaatcttccgtagatgattcaagttattctgagacacctgatggagactcgaatgacattgataaaattttggcttcaatcaaggatctcgaaattaccccatatagcattagagagttcctgcctaaggttaactgggagcagttggcttccatgtatgttcctggtcgctctggtggagaatgtgaagcaaggtggttgaactgggaggatcccttaatcagtcatggaccgtggacaacagatgaggataagacgattctgtatcttgtccagaagaagaatggggtcaatgattggaataatattgcagaagcagtggggactaacaggactccatttcagtgcttggcacgctaccaaaggagcctaaatgcttctatactgaaacgggagtggaccaaggatgaggatgcaaaacttgcttctgctgtagaagcttttggtgagggtaattggcagtctgtagcttctgctttgaacggacgaactggtactcaatgctctaatagatggaagaaatcacttcatccaaccaggacaagagcaggtaagtggactccagaggaagacaaacgcctgatagtagctcaaatgctttttgggtcaaaaagttggaataagacagctcagtttgtgccaggccgaactcaggcacaatgcagagatagatatgtcaactctttagaaccttctttgaggtgtggtgaatggactgaagaagaggactcaaggttgatagcagcaattgaagaatatggacattgctggtcaaaagttgctgcatgtgtgcctcaccggactgataatatgtgctggaggagatggaaggtgttgtttccggatgaagtgcccttgctgagagaagagaaaagaatacgtaagactgctctcatccgcaactttgttgatcgggagaaagaacgtccagcccttggccctaatgattttcttctacaagacgttacctcaatgaaaactttaacttatcctaggaagacgggaggattaagccaagttccaaagaagattaaacccaggaggcatagaaacgatgctcaactttgctctgaggaagaacctgggacaagcaattctgaggttgagacttatgatggggaagatgcctcaaagaagaagaagaagaagaaagttcttaaacagcgtcaaagaaggcacaaagacaatgaacccacaggagactgtgcggctgttgtgcctgtaccaaagaagattagacccaggaggaatagaaacaacggtcaaattcctgggataagcaattctgaggtacggacatgtgatggggatgatggcccgaagaagaagaaagttcttaaacagcgtcacagaaggcacaaaggcactgaactaacaggagagtgtacggctattgtacctgttagtaatgaggatgacgcacacaaagaacccacagaaatgtcttgttcagatgccctgaagaagaagaaagttcttaaacatcgtcacagaaagcacagaggcactgaaccaacaggagagtgtaaggctattgtacctggtagtaatgaggatgacgcacgcaaagaacccacagcgatgtcttattcagatcaaatcataggaacatcagatgaagatgatactgtttcttactatctacataaatcaaggaagagaaagcttgaagctgacctggctgtccaggagtcccccttctactgtataagggatcgtgaagctttaatgcaacatgagccagccatagcttgcaataaacctggtcgacgaaaattagtcagagggcaaaagcttggcctccaagaaccaatgaggggagtgttgagaatttgtccgggaagtgatcatgagactggtgatcctgttgtggcttccacggggaaaaagaattcaaagaagaggcatgctcaaactaccaaacggcacgtcatttgtaatgatcacgatgcaggagatctacctaaacaagaggaggtcacaatcaaatctgggaaggaacaagtgagcgctggtgcagacagcggcgatgatataacacttgcttgttttcttaatagattaaagaagcgacgtgaatctggcagaggagatattcagatgccgaggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0048285 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051225 GO:0051252 GO:0060255 GO:0065007 GO:0070925 GO:0071840 GO:0080090 GO:0090307 GO:0097159 GO:0140014 GO:0140110 GO:1901363 GO:1902850 GO:1903047 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

863

Amino Acids

98.16

Weight (kDa)

9.41

Isoelectric Point (pI)

52.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	237 - 282	4e-10	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	239 - 298	8.2e-14	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	290 - 334	5.5e-14	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	293 - 342	1.6e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	344 - 387	3.7e-12	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	346 - 402	9.9e-12	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	396 - 437	8.3e-14	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	398 - 441	1.8e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002490)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18100 AT3G18100 AT3G18100 AT3G18100
fragaria_vesca	FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070
malus_domestica	MD14G1233900.v1.1
prunus_persica	Prupe.5G230100_v2.0.a1 Prupe.5G230100_v2.0.a1
pyrus_communis	pycom14g19490
rosa_chinensis	RchiOBHm_Chr7g0178781 RchiOBHm_Chr7g0230201
rosa_laevigata	RLG00000005416
rosa_multiflora	Rmu_sc0001901.1_g000001 Rmu_sc0002822.1_g000027 Rmu_sc0004110.1_g000007 Rmu_sc0004110.1_g000008 Rmu_sc0015029.1_g000002 Rmu_sc0025325.1_g000009
rosa_roxburghii	Rroxscaffold_3G00230300 Rroxscaffold_3G00274620
rosa_rugosa	Rorug06G0419400 Rorug06G0419500 Rorug06G0419600
rosa_samantha	Rh7AG018900 Rh7AG408900 Rh7AG409000 Rh7BG018200 Rh7BG388800 Rh7CG019000 Rh7DG018800 Rh7DG406800
rosa_wichuraiana	Rw0G022580 Rw0G022590 Rw7G001530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2164
Acc36I	ACCTGC	1 cut(s)	1021
AccB7I	CCANNNNNTGG	1 cut(s)	1417
AccI	GTMKAC	1 cut(s)	2250
AccIII	TCCGGA	1 cut(s)	1323
AciI	CCGC	3 cut(s)	1380, 1690, 2507
AclWI	GGATC	7 cut(s)	250, 263, 575, 688, 701, 2204, 2338
AcsI	RAATTY	6 cut(s)	351, 388, 548, 1748, 2312, 2373
AcuI	CTGAAG	3 cut(s)	196, 1220, 1963
AfaI	GTAC	6 cut(s)	978, 1706, 1775, 1869, 1880, 2021
AfeI	AGCGCT	1 cut(s)	2493
AfiI	CCNNNNNNNGG	5 cut(s)	252, 609, 1134, 1417, 2299
AflIII	ACRYGT	2 cut(s)	357, 1780
AjiI	CACGTC	2 cut(s)	2412, 2557
AjuI	GAANNNNNNNTTGG	4 cut(s)	36, 68, 282, 314
Alw26I	GTCTC	6 cut(s)	194, 508, 521, 1582, 1676, 2329
AlwI	GGATC	7 cut(s)	250, 263, 575, 688, 701, 2204, 2338
Aor13HI	TCCGGA	1 cut(s)	1323
Aor51HI	AGCGCT	1 cut(s)	2493
AoxI	GGCC	5 cut(s)	339, 1125, 1419, 1797, 2280
ApeKI	GCWGC	3 cut(s)	180, 1225, 1264
ApoI	RAATTY	6 cut(s)	351, 388, 548, 1748, 2312, 2373
ArsI	GACNNNNNNTTYG	2 cut(s)	2396, 2428
AseI	ATTAAT	1 cut(s)	95
AspA2I	CCTAGG	1 cut(s)	1474
AspLEI	GCGC	2 cut(s)	240, 2494
AspS9I	GGNCC	6 cut(s)	107, 340, 712, 881, 1420, 1798
AsuC2I	CCSGG	1 cut(s)	2321
AsuHPI	GGTGA	4 cut(s)	940, 1201, 1270, 2353
AsuII	TTCGAA	1 cut(s)	126
AvaII	GGWCC	3 cut(s)	107, 712, 881
AvrII	CCTAGG	1 cut(s)	1474
AxyI	CCTNAGG	1 cut(s)	608
BaeGI	GKGCMC	1 cut(s)	1337
BamHI	GGATCC	2 cut(s)	255, 693
BauI	CACGAG	1 cut(s)	260
BbsI	GAAGAC	2 cut(s)	1058, 1486
BbvI	GCAGC	3 cut(s)	192, 1237, 1251
BccI	CCATC	6 cut(s)	517, 989, 1301, 1591, 1780, 1789
BceAI	ACGGC	2 cut(s)	1886, 2422
BclI	TGATCA	2 cut(s)	2328, 2424
BcnI	CCSGG	1 cut(s)	2321
BcoDI	GTCTC	6 cut(s)	194, 508, 521, 1582, 1676, 2329
BfaI	CTAG	1 cut(s)	1475
BfmI	CTRYAG	3 cut(s)	369, 914, 947
BfoI	RGCGCY	2 cut(s)	241, 2495
BfuAI	ACCTGC	1 cut(s)	1021
BglII	AGATCT	2 cut(s)	438, 2439
BisI	GCNGC	5 cut(s)	181, 1226, 1265, 1691, 2508
BlnI	CCTAGG	1 cut(s)	1474
BlsI	GCNGC	5 cut(s)	182, 1227, 1266, 1692, 2509
Bme18I	GGWCC	3 cut(s)	107, 712, 881
BmgBI	CACGTC	2 cut(s)	2412, 2557
BmgT120I	GGNCC	6 cut(s)	107, 340, 712, 881, 1420, 1798
BmiI	GGNNCC	3 cut(s)	257, 695, 850
BmrI	ACTGGG	2 cut(s)	627, 696
BmsI	GCATC	8 cut(s)	78, 388, 885, 1527, 1596, 1926, 2421, 2573
BmuI	ACTGGG	2 cut(s)	627, 696
BpiI	GAAGAC	2 cut(s)	1058, 1486
BplI	GAGNNNNNCTC	2 cut(s)	2376, 2408
BpmI	CTGGAG	2 cut(s)	1028, 1320
Bpu14I	TTCGAA	1 cut(s)	126
BpuEI	CTTGAG	1 cut(s)	1197
BpuMI	CCSGG	1 cut(s)	2321
BsaAI	YACGTR	1 cut(s)	1363
BsaWI	WCCGGW	2 cut(s)	1280, 1323
Bsc4I	CCNNNNNNNGG	5 cut(s)	252, 609, 1134, 1417, 2299
Bse1I	ACTGG	6 cut(s)	80, 267, 622, 691, 978, 2343
Bse21I	CCTNAGG	1 cut(s)	608
Bse3DI	GCAATG	2 cut(s)	213, 1245
BseAI	TCCGGA	1 cut(s)	1323
BseGI	GGATG	9 cut(s)	93, 894, 900, 1011, 1332, 1376, 1797, 1902, 2043
BseLI	CCNNNNNNNGG	5 cut(s)	252, 609, 1134, 1417, 2299
BseMI	GCAATG	2 cut(s)	213, 1245
BseMII	CTCAG	8 cut(s)	338, 503, 1126, 1147, 1333, 1544, 1571, 1760
BseNI	ACTGG	6 cut(s)	80, 267, 622, 691, 978, 2343
BseRI	GAGGAG	4 cut(s)	175, 1317, 2470, 2585
BseSI	GKGCMC	1 cut(s)	1337
BseXI	GCAGC	3 cut(s)	192, 1237, 1251
BsgI	GTGCAG	2 cut(s)	56, 2519
BshFI	GGCC	5 cut(s)	341, 1127, 1421, 1799, 2282
BsiSI	CCGG	3 cut(s)	1281, 1324, 2320
BslFI	GGGAC	4 cut(s)	228, 819, 1581, 2160
BslI	CCNNNNNNNGG	5 cut(s)	252, 609, 1134, 1417, 2299
BsmAI	GTCTC	6 cut(s)	194, 508, 521, 1582, 1676, 2329
BsmFI	GGGAC	4 cut(s)	228, 819, 1581, 2160
BsnI	GGCC	5 cut(s)	341, 1127, 1421, 1799, 2282
Bsp119I	TTCGAA	1 cut(s)	126
Bsp1286I	GDGCHC	1 cut(s)	1337
Bsp13I	TCCGGA	1 cut(s)	1323
BspACI	CCGC	3 cut(s)	1380, 1690, 2507
BspANI	GGCC	5 cut(s)	341, 1127, 1421, 1799, 2282
BspCNI	CTCAG	8 cut(s)	337, 504, 1125, 1146, 1334, 1545, 1572, 1761
BspEI	TCCGGA	1 cut(s)	1323
BspHI	TCATGA	2 cut(s)	309, 2331
BspLI	GGNNCC	3 cut(s)	257, 695, 850
BspMI	ACCTGC	1 cut(s)	1021
BspPI	GGATC	7 cut(s)	250, 263, 575, 688, 701, 2204, 2338
BspT104I	TTCGAA	1 cut(s)	126
BsrDI	GCAATG	2 cut(s)	213, 1245
BsrI	ACTGG	6 cut(s)	80, 267, 622, 691, 978, 2343
BssSI	CACGAG	1 cut(s)	260
BssT1I	CCWWGG	4 cut(s)	289, 884, 1416, 1474
Bst2BI	CACGAG	1 cut(s)	260
Bst4CI	ACNGT	5 cut(s)	716, 1687, 1744, 2112, 2188
Bst6I	CTCTTC	4 cut(s)	1199, 1343, 2134, 2377
BstAPI	GCANNNNNTGC	1 cut(s)	904
BstBAI	YACGTR	1 cut(s)	1363
BstBI	TTCGAA	1 cut(s)	126
BstC8I	GCNNGC	5 cut(s)	837, 2046, 2225, 2235, 2390
BstDSI	CCRYGG	2 cut(s)	715, 2360
BstENI	CCTNNNNNAGG	1 cut(s)	607
BstF5I	GGATG	9 cut(s)	93, 894, 900, 1011, 1332, 1376, 1797, 1902, 2043
BstH2I	RGCGCY	2 cut(s)	241, 2495
BstHHI	GCGC	2 cut(s)	240, 2494
BstMAI	GTCTC	6 cut(s)	194, 508, 521, 1582, 1676, 2329
BstMWI	GCNNNNNNNGC	6 cut(s)	325, 836, 904, 919, 2161, 2220
BstNSI	RCATGY	4 cut(s)	361, 1271, 1784, 2392
BstSFI	CTRYAG	3 cut(s)	369, 914, 947
BstSLI	GKGCMC	1 cut(s)	1337
BstSNI	TACGTA	1 cut(s)	1363
BstV1I	GCAGC	3 cut(s)	192, 1237, 1251
BstV2I	GAAGAC	2 cut(s)	1058, 1486
BstX2I	RGATCY	5 cut(s)	255, 438, 567, 693, 2439
BstYI	RGATCY	5 cut(s)	255, 438, 567, 693, 2439
Bsu36I	CCTNAGG	1 cut(s)	608
BsuRI	GGCC	5 cut(s)	341, 1127, 1421, 1799, 2282
BtgI	CCRYGG	2 cut(s)	715, 2360
BtgZI	GCGATG	2 cut(s)	2077, 2525
BtrI	CACGTC	2 cut(s)	2412, 2557
BtsCI	GGATG	9 cut(s)	93, 894, 900, 1011, 1332, 1376, 1797, 1902, 2043
BtsI	GCAGTG	1 cut(s)	806
BtsIMutI	CAGTG	5 cut(s)	73, 806, 832, 1847, 1988
BveI	ACCTGC	1 cut(s)	1021
Cac8I	GCNNGC	5 cut(s)	837, 2046, 2225, 2235, 2390
CciI	TCATGA	2 cut(s)	309, 2331
CfoI	GCGC	2 cut(s)	240, 2494
Cfr13I	GGNCC	6 cut(s)	107, 340, 712, 881, 1420, 1798
CseI	GACGC	4 cut(s)	1636, 1816, 1909, 2050
CsiI	ACCWGGT	2 cut(s)	2022, 2244
Csp6I	GTAC	6 cut(s)	977, 1705, 1774, 1868, 1879, 2020
CviAII	CATG	9 cut(s)	310, 358, 636, 709, 1268, 1781, 2218, 2332, 2389
CviQI	GTAC	6 cut(s)	977, 1705, 1774, 1868, 1879, 2020
DrdI	GACNNNNNNGTC	1 cut(s)	2164
DseDI	GACNNNNNNGTC	1 cut(s)	2164
Eam1104I	CTCTTC	4 cut(s)	1199, 1343, 2134, 2377
EarI	CTCTTC	4 cut(s)	1199, 1343, 2134, 2377
Eco105I	TACGTA	1 cut(s)	1363
Eco130I	CCWWGG	4 cut(s)	289, 884, 1416, 1474
Eco47I	GGWCC	3 cut(s)	107, 712, 881
Eco47III	AGCGCT	1 cut(s)	2493
Eco57I	CTGAAG	3 cut(s)	196, 1220, 1963
Eco81I	CCTNAGG	1 cut(s)	608
EcoNI	CCTNNNNNAGG	1 cut(s)	607
EcoO109I	RGGNCCY	1 cut(s)	107
EcoRI	GAATTC	1 cut(s)	2373
EcoT14I	CCWWGG	4 cut(s)	289, 884, 1416, 1474
ErhI	CCWWGG	4 cut(s)	289, 884, 1416, 1474
FaeI	CATG	9 cut(s)	313, 361, 639, 712, 1271, 1784, 2221, 2335, 2392
FaqI	GGGAC	4 cut(s)	228, 819, 1581, 2160
FatI	CATG	9 cut(s)	309, 357, 635, 708, 1267, 1780, 2217, 2331, 2388
FbaI	TGATCA	2 cut(s)	2328, 2424
FblI	GTMKAC	1 cut(s)	2250
Fnu4HI	GCNGC	5 cut(s)	181, 1226, 1265, 1691, 2508
FokI	GGATG	9 cut(s)	100, 901, 907, 998, 1339, 1363, 1804, 1909, 2050
Fsp4HI	GCNGC	5 cut(s)	181, 1226, 1265, 1691, 2508
FspBI	CTAG	1 cut(s)	1475
GlaI	GCGC	2 cut(s)	239, 2493
GluI	GCNGC	5 cut(s)	181, 1226, 1265, 1691, 2508
GsuI	CTGGAG	2 cut(s)	1028, 1320
HaeII	RGCGCY	2 cut(s)	241, 2495
HaeIII	GGCC	5 cut(s)	341, 1127, 1421, 1799, 2282
HapII	CCGG	3 cut(s)	1281, 1324, 2320
HgaI	GACGC	4 cut(s)	1636, 1816, 1909, 2050
HhaI	GCGC	2 cut(s)	240, 2494
Hin1II	CATG	9 cut(s)	313, 361, 639, 712, 1271, 1784, 2221, 2335, 2392
Hin6I	GCGC	2 cut(s)	238, 2492
HinP1I	GCGC	2 cut(s)	238, 2492
HincII	GTYRAC	3 cut(s)	615, 1161, 2251
HindII	GTYRAC	3 cut(s)	615, 1161, 2251
HindIII	AAGCTT	4 cut(s)	920, 2146, 2204, 2275
HpaI	GTTAAC	1 cut(s)	615
HpaII	CCGG	3 cut(s)	1281, 1324, 2320
HphI	GGTGA	4 cut(s)	940, 1201, 1270, 2353
Hpy166II	GTNNAC	7 cut(s)	615, 719, 881, 1040, 1161, 1868, 2251
Hpy8I	GTNNAC	7 cut(s)	615, 719, 881, 1040, 1161, 1868, 2251
Hpy99I	CGWCG	2 cut(s)	2255, 2558
HpyAV	CCTTC	7 cut(s)	246, 1184, 1305, 1649, 1829, 2190, 2472
HpyCH4III	ACNGT	5 cut(s)	716, 1687, 1744, 2112, 2188
HpyCH4IV	ACGT	5 cut(s)	1362, 1407, 1445, 2411, 2556
HpyF10VI	GCNNNNNNNGC	6 cut(s)	325, 836, 904, 919, 2161, 2220
HpySE526I	ACGT	5 cut(s)	1362, 1407, 1445, 2411, 2556
Hsp92II	CATG	9 cut(s)	313, 361, 639, 712, 1271, 1784, 2221, 2335, 2392
HspAI	GCGC	2 cut(s)	238, 2492
Kpn2I	TCCGGA	1 cut(s)	1323
Ksp22I	TGATCA	2 cut(s)	2328, 2424
KspAI	GTTAAC	1 cut(s)	615
LmnI	GCTCC	2 cut(s)	621, 848
Lsp1109I	GCAGC	3 cut(s)	192, 1237, 1251
LweI	GCATC	8 cut(s)	78, 388, 885, 1527, 1596, 1926, 2421, 2573
MabI	ACCWGGT	2 cut(s)	2022, 2244
MaeI	CTAG	1 cut(s)	1475
MaeII	ACGT	5 cut(s)	1362, 1407, 1445, 2411, 2556
MaeIII	GTNAC	4 cut(s)	1446, 1828, 1969, 2460
MfeI	CAATTG	1 cut(s)	1229
MflI	RGATCY	5 cut(s)	255, 438, 567, 693, 2439
MhlI	GDGCHC	1 cut(s)	1337
MlyI	GAGTC	5 cut(s)	523, 810, 1035, 1204, 2182
MmeI	TCCRAC	2 cut(s)	1039, 1078
MroI	TCCGGA	1 cut(s)	1323
MslI	CAYNNNNRTG	3 cut(s)	825, 1921, 2062
MspA1I	CMGCKG	1 cut(s)	2507
MspI	CCGG	3 cut(s)	1281, 1324, 2320
MunI	CAATTG	1 cut(s)	1229
MwoI	GCNNNNNNNGC	6 cut(s)	325, 836, 904, 919, 2161, 2220
NciI	CCSGG	1 cut(s)	2321
NlaIII	CATG	9 cut(s)	313, 361, 639, 712, 1271, 1784, 2221, 2335, 2392
NlaIV	GGNNCC	3 cut(s)	257, 695, 850
NmuCI	GTSAC	3 cut(s)	1828, 1969, 2460
NspI	RCATGY	4 cut(s)	361, 1271, 1784, 2392
NspV	TTCGAA	1 cut(s)	126
PaeI	GCATGC	1 cut(s)	2392
PagI	TCATGA	2 cut(s)	309, 2331
PciI	ACATGT	2 cut(s)	357, 1780
PfeI	GAWTC	5 cut(s)	19, 298, 499, 741, 2560
PflMI	CCANNNNNTGG	1 cut(s)	1417
PfoI	TCCNGGA	2 cut(s)	2168, 2319
PkrI	GCNGC	5 cut(s)	182, 1227, 1266, 1692, 2509
PleI	GAGTC	5 cut(s)	523, 810, 1035, 1204, 2181
PpsI	GAGTC	5 cut(s)	523, 810, 1035, 1204, 2181
Ppu21I	YACGTR	1 cut(s)	1363
PpuMI	RGGWCCY	1 cut(s)	107
PscI	ACATGT	2 cut(s)	357, 1780
PshBI	ATTAAT	1 cut(s)	95
Psp5II	RGGWCCY	1 cut(s)	107
PspN4I	GGNNCC	3 cut(s)	257, 695, 850
PspPI	GGNCC	6 cut(s)	107, 340, 712, 881, 1420, 1798
PspPPI	RGGWCCY	1 cut(s)	107
PsuI	RGATCY	5 cut(s)	255, 438, 567, 693, 2439
RsaI	GTAC	6 cut(s)	978, 1706, 1775, 1869, 1880, 2021
RsaNI	GTAC	6 cut(s)	977, 1705, 1774, 1868, 1879, 2020
RseI	CAYNNNNRTG	3 cut(s)	825, 1921, 2062
SalI	GTCGAC	1 cut(s)	2249
SatI	GCNGC	5 cut(s)	181, 1226, 1265, 1691, 2508
Sau96I	GGNCC	6 cut(s)	107, 340, 712, 881, 1420, 1798
SchI	GAGTC	5 cut(s)	523, 810, 1035, 1204, 2182
SduI	GDGCHC	1 cut(s)	1337
SexAI	ACCWGGT	2 cut(s)	2022, 2244
SfaNI	GCATC	8 cut(s)	78, 388, 885, 1527, 1596, 1926, 2421, 2573
SfcI	CTRYAG	3 cut(s)	369, 914, 947
SfuI	TTCGAA	1 cut(s)	126
SinI	GGWCC	3 cut(s)	107, 712, 881
SmiMI	CAYNNNNRTG	3 cut(s)	825, 1921, 2062
SmlI	CTYRAG	1 cut(s)	1212
SmoI	CTYRAG	1 cut(s)	1212
SnaBI	TACGTA	1 cut(s)	1363
SphI	GCATGC	1 cut(s)	2392
SsiI	CCGC	3 cut(s)	1380, 1690, 2507
SspI	AATATT	1 cut(s)	789
SspMI	CTAG	1 cut(s)	1475
StyI	CCWWGG	4 cut(s)	289, 884, 1416, 1474
TaaI	ACNGT	5 cut(s)	716, 1687, 1744, 2112, 2188
TaiI	ACGT	5 cut(s)	1365, 1410, 1448, 2414, 2559
TaqI	TCGA	5 cut(s)	126, 408, 532, 572, 2250
TauI	GCSGC	2 cut(s)	1693, 2510
TfiI	GAWTC	5 cut(s)	19, 298, 499, 741, 2560
TscAI	CASTG	5 cut(s)	80, 806, 832, 1854, 1995
TseFI	GTSAC	3 cut(s)	1828, 1969, 2460
TseI	GCWGC	3 cut(s)	180, 1225, 1264
Tsp45I	GTSAC	3 cut(s)	1828, 1969, 2460
TspDTI	ATGAA	6 cut(s)	389, 1000, 1343, 1471, 1685, 2114
TspGWI	ACGGA	3 cut(s)	480, 980, 1791
TspRI	CASTG	5 cut(s)	80, 806, 832, 1854, 1995
Van91I	CCANNNNNTGG	1 cut(s)	1417
VpaK11BI	GGWCC	3 cut(s)	107, 712, 881
VspI	ATTAAT	1 cut(s)	95
XagI	CCTNNNNNAGG	1 cut(s)	607
XapI	RAATTY	6 cut(s)	351, 388, 548, 1748, 2312, 2373
XceI	RCATGY	4 cut(s)	361, 1271, 1784, 2392
XcmI	CCANNNNNNNNNTGG	1 cut(s)	763
XmaJI	CCTAGG	1 cut(s)	1474
XmiI	GTMKAC	1 cut(s)	2250
XspI	CTAG	1 cut(s)	1475

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.