Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002147.1

Orthogroup ID

OG0002213

Physical Location & Seq

Genomic Coordinates Reverse (-)

78002 .. 82070

Gene Structure 4069 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002147.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

atggaagaggatttgtcaagtacggtctcaaacgcaggcacgacaacaaggcggaagaggacatatcaaccagaagcttctatttcaagtatcactggtttcttggttcaagagagtaagcgcttgagtcatgggagcagcaatttgtctaccaatgccaaattcaaaggagttgtgctgcaaaaaattggccactggggtgctcagatctatgccattcacaatagggtttggcttggaatattcaatttcgaggtcgacacagccatgtcttatgatagtgctgcaatcaagcttcgcaacggagagtgccaaaaggaactttgcatggaccaaggtaaaagagaaaaatccgacggtgtgtgttctctcccggccgaacacgaccggcggtctcgcctctacgttccggcccgggaaaggattgatgatgcggagatggagtgggttttcagggtgacggtgtggtccagggagggtggatttttcaccgatcggatcgaggctgtggagatctcgaatggtgtctgcctcagctttggtctgggatcgttttgtggcaatctgcctggtgtaggggctggctacgacgtgacaaggcgcgggaatggttggcagcgtggtggcgacggggctcactggcgacgggaatggttgcctgctgtgcttgttttggctgtgggaggtggtgtttgtgccgggcctttgttcttgggtctctctggtgatcgaagctttaggtgtccggtggcagggattgttgcggtcgcggtgtgggttatgtatagctctggtaggacgatgtggcgggtcaaaggggaggctggatcctgggtgacgctcggcagttgggttgctcgaggatggtggatgcgaacagcgtcttcggacaactgggttggagatgcagtggccggggacgatttgttgcaagtctcaatccgattcggaggatactccgacttcgccagaggtctgacacaggtggtgaccggacgcaggggagggtctgatgcaggtgggcgtgctccgtctcaggcagcggcgaccaggtttcaggggcggagacccaaggcgcgtactggatcaaaattgggttgggccctaaactgtggctggaaaacccttgcttcatggatctatgcgctgccgcctagtggcagggtgatactaagtgttgtcggatatatttttcggcggcatcatagtaggaaagctgtgctaaagctagcaattatgctatgttgtaatcgtgttacatgtcgagttatctttccgctgtgtcactgctatgttaaagcaaatagagtagctaattgtgcactctttgctagttggtgcttgttagaatacaagtctcctgtagagatttctgatattatttcagaaaatactctagatgcttattgtaatcaggggtttaggctcaatgtccccccctgtattcgacagtttcattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2 B3

Protein Analysis

486

Amino Acids

53.59

Weight (kDa)

9.5

Isoelectric Point (pI)

38.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002213)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50680 AT1G51120
fragaria_vesca	FvH4_3g44200 FvH4_5g30960 FvH4_5g33680
malus_domestica	MD02G1009000.v1.1 MD03G1016500.v1.1 MD11G1017200.v1.1 MD15G1154300.v1.1
prunus_persica	Prupe.6G015000_v2.0.a1 Prupe.7G261000_v2.0.a1 Prupe.7G261000_v2.0.a1 Prupe.7G261000_v2.0.a1 Prupe.7G261000_v2.0.a1
pyrus_communis	pycom03g01420
rosa_chinensis	RchiOBHm_Chr5g0046591 RchiOBHm_Chr5g0080541 RchiOBHm_Chr7g0232691
rosa_laevigata	RLG00000001316 RLG00000034419 RLG00000036866
rosa_multiflora	Rmu_sc0000359.1_g000010 Rmu_sc0002147.1_g000014 Rmu_sc0003878.1_g000030
rosa_roxburghii	Rroxscaffold_1G00002850 Rroxscaffold_1G00034770 Rroxscaffold_5G00381100
rosa_rugosa	Rorug05G0229700 Rorug05G0469700
rosa_samantha	Rh5AG310200 Rh5AG523400 Rh5BG318500 Rh5BG545400 Rh5CG344200 Rh5CG568600 Rh5DG328900 Rh5DG555600 Rh7AG430500 Rh7CG449300
rosa_wichuraiana	Rw0G023150 Rw5G028920 Rw5G048570 Rw7G035560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1007
AasI	GACNNNNNNGTC	1 cut(s)	466
Acc36I	ACCTGC	1 cut(s)	1007
AccI	GTMKAC	2 cut(s)	149, 258
AccII	CGCG	3 cut(s)	603, 770, 1078
AclWI	GGATC	6 cut(s)	506, 556, 822, 835, 1093, 1145
AcoI	YGGCCR	3 cut(s)	190, 375, 912
AcsI	RAATTY	1 cut(s)	161
AfaI	GTAC	2 cut(s)	22, 1081
AfeI	AGCGCT	1 cut(s)	122
AfiI	CCNNNNNNNGG	5 cut(s)	420, 575, 752, 999, 1157
AflIII	ACRYGT	1 cut(s)	1259
AgsI	TTSAA	4 cut(s)	87, 110, 166, 247
AhdI	GACNNNNNGTC	1 cut(s)	391
AjiI	CACGTC	1 cut(s)	592
AjnI	CCWGG	4 cut(s)	470, 568, 830, 1049
AjuI	GAANNNNNNNTTGG	2 cut(s)	146, 178
AleI	CACNNNNGTG	1 cut(s)	198
AluBI	AGCT	8 cut(s)	77, 295, 537, 735, 789, 1217, 1228, 1313
AluI	AGCT	8 cut(s)	77, 295, 537, 735, 789, 1217, 1228, 1313
Alw21I	GWGCWC	3 cut(s)	205, 1030, 1324
Alw26I	GTCTC	7 cut(s)	31, 399, 722, 940, 1038, 1060, 1362
Alw44I	GTGCAC	1 cut(s)	1320
AlwI	GGATC	6 cut(s)	506, 556, 822, 835, 1093, 1145
Ama87I	CYCGRG	2 cut(s)	414, 858
Aor51HI	AGCGCT	1 cut(s)	122
AoxI	GGCC	6 cut(s)	190, 375, 411, 701, 912, 1101
ApaI	GGGCCC	1 cut(s)	1105
ApaLI	GTGCAC	1 cut(s)	1320
ApeKI	GCWGC	6 cut(s)	138, 178, 284, 616, 1040, 1147
ApoI	RAATTY	1 cut(s)	161
AspLEI	GCGC	4 cut(s)	123, 603, 1078, 1147
AspS9I	GGNCC	6 cut(s)	331, 412, 468, 701, 1101, 1102
AsuC2I	CCSGG	5 cut(s)	374, 415, 416, 700, 916
AsuHPI	GGTGA	6 cut(s)	469, 481, 737, 847, 1000, 1177
AsuNHI	GCTAGC	1 cut(s)	1228
AvaI	CYCGRG	2 cut(s)	414, 858
AvaII	GGWCC	2 cut(s)	331, 468
BaeGI	GKGCMC	2 cut(s)	1105, 1324
BalI	TGGCCA	1 cut(s)	192
BamHI	GGATCC	1 cut(s)	827
BanII	GRGCYC	2 cut(s)	637, 1105
BbsI	GAAGAC	1 cut(s)	876
Bbv12I	GWGCWC	3 cut(s)	205, 1030, 1324
BbvCI	CCTCAGC	1 cut(s)	533
BbvI	GCAGC	6 cut(s)	150, 165, 271, 628, 1052, 1134
BccI	CCATC	2 cut(s)	433, 858
BciT130I	CCWGG	4 cut(s)	472, 570, 832, 1051
BciVI	GTATCC	1 cut(s)	947
BcnI	CCSGG	5 cut(s)	374, 415, 416, 700, 916
BcoDI	GTCTC	7 cut(s)	31, 399, 722, 940, 1038, 1060, 1362
BfaI	CTAG	4 cut(s)	1155, 1229, 1332, 1397
BfmI	CTRYAG	1 cut(s)	1362
BfoI	RGCGCY	1 cut(s)	124
BfuAI	ACCTGC	1 cut(s)	1007
BfuI	GTATCC	1 cut(s)	947
BglII	AGATCT	2 cut(s)	207, 513
BisI	GCNGC	9 cut(s)	139, 179, 285, 617, 1041, 1044, 1148, 1151, 1199
BlsI	GCNGC	9 cut(s)	140, 180, 286, 618, 1042, 1045, 1149, 1152, 1200
Bme1390I	CCNGG	9 cut(s)	374, 415, 416, 472, 570, 700, 832, 916, 1051
Bme18I	GGWCC	2 cut(s)	331, 468
BmeRI	GACNNNNNGTC	1 cut(s)	391
BmeT110I	CYCGRG	2 cut(s)	414, 858
BmgBI	CACGTC	1 cut(s)	592
BmgT120I	GGNCC	6 cut(s)	331, 412, 468, 701, 1101, 1102
BmiI	GGNNCC	2 cut(s)	829, 1103
BmrFI	CCNGG	9 cut(s)	374, 415, 416, 472, 570, 700, 832, 916, 1051
BmrI	ACTGGG	2 cut(s)	205, 904
BmsI	GCATC	6 cut(s)	421, 861, 895, 1003, 1210, 1390
BmtI	GCTAGC	1 cut(s)	1232
BmuI	ACTGGG	2 cut(s)	205, 904
BpiI	GAAGAC	1 cut(s)	876
Bpu10I	CCTNAGC	1 cut(s)	533
BpuEI	CTTGAG	1 cut(s)	145
BpuMI	CCSGG	5 cut(s)	374, 415, 416, 700, 916
BsaI	GGTCTC	4 cut(s)	31, 399, 722, 1060
BsaJI	CCNNGG	6 cut(s)	334, 414, 471, 831, 915, 1071
BsaWI	WCCGGW	2 cut(s)	745, 992
BsaXI	ACNNNNNCTCC	6 cut(s)	428, 458, 675, 705, 894, 924
Bsc4I	CCNNNNNNNGG	5 cut(s)	420, 575, 752, 999, 1157
Bse118I	RCCGGY	1 cut(s)	387
Bse1I	ACTGG	5 cut(s)	100, 200, 644, 899, 1087
BseBI	CCWGG	4 cut(s)	472, 570, 832, 1051
BseDI	CCNNGG	6 cut(s)	334, 414, 471, 831, 915, 1071
BseGI	GGATG	2 cut(s)	869, 876
BseLI	CCNNNNNNNGG	5 cut(s)	420, 575, 752, 999, 1157
BseMII	CTCAG	3 cut(s)	218, 547, 1049
BseNI	ACTGG	5 cut(s)	100, 200, 644, 899, 1087
BseSI	GKGCMC	2 cut(s)	1105, 1324
BseX3I	CGGCCG	1 cut(s)	375
BseXI	GCAGC	6 cut(s)	150, 165, 271, 628, 1052, 1134
Bsh1236I	CGCG	3 cut(s)	603, 770, 1078
Bsh1285I	CGRYCG	4 cut(s)	378, 388, 496, 768
BshFI	GGCC	6 cut(s)	192, 377, 413, 703, 914, 1103
BsiEI	CGRYCG	4 cut(s)	378, 388, 496, 768
BsiHKAI	GWGCWC	3 cut(s)	205, 1030, 1324
BsiHKCI	CYCGRG	2 cut(s)	414, 858
BsiSI	CCGG	8 cut(s)	374, 388, 410, 415, 699, 746, 915, 993
BslFI	GGGAC	2 cut(s)	932, 1418
BslI	CCNNNNNNNGG	5 cut(s)	420, 575, 752, 999, 1157
BsmAI	GTCTC	7 cut(s)	31, 399, 722, 940, 1038, 1060, 1362
BsmBI	CGTCTC	1 cut(s)	1038
BsmFI	GGGAC	2 cut(s)	932, 1418
BsnI	GGCC	6 cut(s)	192, 377, 413, 703, 914, 1103
Bso31I	GGTCTC	4 cut(s)	31, 399, 722, 1060
BsoBI	CYCGRG	2 cut(s)	414, 858
Bsp120I	GGGCCC	1 cut(s)	1101
Bsp1286I	GDGCHC	5 cut(s)	205, 637, 1030, 1105, 1324
Bsp143I	GATC	9 cut(s)	207, 493, 498, 513, 548, 727, 827, 1085, 1137
BspANI	GGCC	6 cut(s)	192, 377, 413, 703, 914, 1103
BspCNI	CTCAG	3 cut(s)	217, 546, 1048
BspFNI	CGCG	3 cut(s)	603, 770, 1078
BspLI	GGNNCC	2 cut(s)	829, 1103
BspMI	ACCTGC	1 cut(s)	1007
BspOI	GCTAGC	1 cut(s)	1232
BspPI	GGATC	6 cut(s)	506, 556, 822, 835, 1093, 1145
BspTNI	GGTCTC	4 cut(s)	31, 399, 722, 1060
BsrFI	RCCGGY	1 cut(s)	387
BsrI	ACTGG	5 cut(s)	100, 200, 644, 899, 1087
BssAI	RCCGGY	1 cut(s)	387
BssECI	CCNNGG	6 cut(s)	334, 414, 471, 831, 915, 1071
BssMI	GATC	9 cut(s)	207, 493, 498, 513, 548, 727, 827, 1085, 1137
BssT1I	CCWWGG	2 cut(s)	334, 1071
Bst2UI	CCWGG	4 cut(s)	472, 570, 832, 1051
Bst4CI	ACNGT	5 cut(s)	25, 359, 463, 1112, 1452
Bst6I	CTCTTC	1 cut(s)	50
BstAPI	GCANNNNNTGC	1 cut(s)	1328
BstC8I	GCNNGC	5 cut(s)	37, 583, 660, 1026, 1230
BstDEI	CTNAG	4 cut(s)	204, 533, 1035, 1172
BstEII	GGTNACC	1 cut(s)	988
BstENI	CCTNNNNNAGG	1 cut(s)	573
BstF5I	GGATG	2 cut(s)	869, 876
BstFNI	CGCG	3 cut(s)	603, 770, 1078
BstH2I	RGCGCY	1 cut(s)	124
BstHHI	GCGC	4 cut(s)	123, 603, 1078, 1147
BstKTI	GATC	9 cut(s)	210, 496, 501, 516, 551, 730, 830, 1088, 1140
BstMAI	GTCTC	7 cut(s)	31, 399, 722, 940, 1038, 1060, 1362
BstMBI	GATC	9 cut(s)	207, 493, 498, 513, 548, 727, 827, 1085, 1137
BstMCI	CGRYCG	4 cut(s)	378, 388, 496, 768
BstMWI	GCNNNNNNNGC	3 cut(s)	664, 1319, 1328
BstNI	CCWGG	4 cut(s)	472, 570, 832, 1051
BstNSI	RCATGY	1 cut(s)	1263
BstPI	GGTNACC	1 cut(s)	988
BstSCI	CCNGG	9 cut(s)	372, 413, 414, 470, 568, 698, 830, 914, 1049
BstSFI	CTRYAG	1 cut(s)	1362
BstSLI	GKGCMC	2 cut(s)	1105, 1324
BstUI	CGCG	3 cut(s)	603, 770, 1078
BstV1I	GCAGC	6 cut(s)	150, 165, 271, 628, 1052, 1134
BstV2I	GAAGAC	1 cut(s)	876
BstX2I	RGATCY	4 cut(s)	207, 513, 827, 1137
BstYI	RGATCY	4 cut(s)	207, 513, 827, 1137
BstZI	CGGCCG	1 cut(s)	375
BsuI	GTATCC	1 cut(s)	947
BsuRI	GGCC	6 cut(s)	192, 377, 413, 703, 914, 1103
BtrI	CACGTC	1 cut(s)	592
BtsCI	GGATG	2 cut(s)	869, 876
BtsI	GCAGTG	2 cut(s)	915, 1285
BtsIMutI	CAGTG	5 cut(s)	93, 193, 637, 915, 1285
BveI	ACCTGC	1 cut(s)	1007
Cac8I	GCNNGC	5 cut(s)	37, 583, 660, 1026, 1230
CfoI	GCGC	4 cut(s)	123, 603, 1078, 1147
Cfr10I	RCCGGY	1 cut(s)	387
Cfr13I	GGNCC	6 cut(s)	331, 412, 468, 701, 1101, 1102
Cfr9I	CCCGGG	1 cut(s)	414
CseI	GACGC	3 cut(s)	847, 870, 1005
CsiI	ACCWGGT	1 cut(s)	1049
Csp6I	GTAC	2 cut(s)	21, 1080
CviAII	CATG	5 cut(s)	131, 268, 328, 1134, 1260
CviQI	GTAC	2 cut(s)	21, 1080
DdeI	CTNAG	4 cut(s)	204, 533, 1035, 1172
DpnI	GATC	9 cut(s)	209, 495, 500, 515, 550, 729, 829, 1087, 1139
DpnII	GATC	9 cut(s)	207, 493, 498, 513, 548, 727, 827, 1085, 1137
DrdI	GACNNNNNNGTC	1 cut(s)	466
DriI	GACNNNNNGTC	1 cut(s)	391
DseDI	GACNNNNNNGTC	1 cut(s)	466
EaeI	YGGCCR	3 cut(s)	190, 375, 912
EagI	CGGCCG	1 cut(s)	375
Eam1104I	CTCTTC	1 cut(s)	50
Eam1105I	GACNNNNNGTC	1 cut(s)	391
EarI	CTCTTC	1 cut(s)	50
EciI	GGCGGA	2 cut(s)	67, 1078
EclXI	CGGCCG	1 cut(s)	375
Eco130I	CCWWGG	2 cut(s)	334, 1071
Eco24I	GRGCYC	2 cut(s)	637, 1105
Eco31I	GGTCTC	4 cut(s)	31, 399, 722, 1060
Eco47I	GGWCC	2 cut(s)	331, 468
Eco47III	AGCGCT	1 cut(s)	122
Eco52I	CGGCCG	1 cut(s)	375
Eco88I	CYCGRG	2 cut(s)	414, 858
Eco91I	GGTNACC	1 cut(s)	988
EcoNI	CCTNNNNNAGG	1 cut(s)	573
EcoO109I	RGGNCCY	1 cut(s)	1102
EcoO65I	GGTNACC	1 cut(s)	988
EcoRII	CCWGG	4 cut(s)	470, 568, 830, 1049
EcoT14I	CCWWGG	2 cut(s)	334, 1071
EcoT38I	GRGCYC	2 cut(s)	637, 1105
ErhI	CCWWGG	2 cut(s)	334, 1071
Esp3I	CGTCTC	1 cut(s)	1038
FaeI	CATG	5 cut(s)	134, 271, 331, 1137, 1263
FaqI	GGGAC	2 cut(s)	932, 1418
FatI	CATG	5 cut(s)	130, 267, 327, 1133, 1259
FauI	CCCGC	2 cut(s)	596, 801
FblI	GTMKAC	2 cut(s)	149, 258
Fnu4HI	GCNGC	9 cut(s)	139, 179, 285, 617, 1041, 1044, 1148, 1151, 1199
FokI	GGATG	2 cut(s)	876, 883
FriOI	GRGCYC	2 cut(s)	637, 1105
Fsp4HI	GCNGC	9 cut(s)	139, 179, 285, 617, 1041, 1044, 1148, 1151, 1199
FspBI	CTAG	4 cut(s)	1155, 1229, 1332, 1397
GlaI	GCGC	4 cut(s)	122, 602, 1077, 1146
GluI	GCNGC	9 cut(s)	139, 179, 285, 617, 1041, 1044, 1148, 1151, 1199
HaeII	RGCGCY	1 cut(s)	124
HaeIII	GGCC	6 cut(s)	192, 377, 413, 703, 914, 1103
HapII	CCGG	8 cut(s)	374, 388, 410, 415, 699, 746, 915, 993
HgaI	GACGC	3 cut(s)	847, 870, 1005
HhaI	GCGC	4 cut(s)	123, 603, 1078, 1147
Hin1II	CATG	5 cut(s)	134, 271, 331, 1137, 1263
Hin6I	GCGC	4 cut(s)	121, 601, 1076, 1145
HinP1I	GCGC	4 cut(s)	121, 601, 1076, 1145
HincII	GTYRAC	1 cut(s)	259
HindII	GTYRAC	1 cut(s)	259
HindIII	AAGCTT	3 cut(s)	75, 293, 733
HinfI	GANTC	2 cut(s)	127, 945
HpaII	CCGG	8 cut(s)	374, 388, 410, 415, 699, 746, 915, 993
HphI	GGTGA	6 cut(s)	469, 481, 737, 847, 1000, 1177
Hpy166II	GTNNAC	3 cut(s)	150, 259, 1322
Hpy188III	TCNNGA	3 cut(s)	110, 517, 1397
Hpy8I	GTNNAC	3 cut(s)	150, 259, 1322
Hpy99I	CGWCG	4 cut(s)	359, 593, 632, 648
HpyCH4III	ACNGT	5 cut(s)	25, 359, 463, 1112, 1452
HpyCH4IV	ACGT	2 cut(s)	405, 591
HpyCH4V	TGCA	7 cut(s)	181, 287, 327, 908, 931, 1016, 1322
HpyF10VI	GCNNNNNNNGC	3 cut(s)	664, 1319, 1328
HpyF3I	CTNAG	4 cut(s)	204, 533, 1035, 1172
HpySE526I	ACGT	2 cut(s)	405, 591
Hsp92II	CATG	5 cut(s)	134, 271, 331, 1137, 1263
HspAI	GCGC	4 cut(s)	121, 601, 1076, 1145
Kzo9I	GATC	9 cut(s)	207, 493, 498, 513, 548, 727, 827, 1085, 1137
LmnI	GCTCC	2 cut(s)	135, 1033
Lsp1109I	GCAGC	6 cut(s)	150, 165, 271, 628, 1052, 1134
LweI	GCATC	6 cut(s)	421, 861, 895, 1003, 1210, 1390
MabI	ACCWGGT	1 cut(s)	1049
MaeI	CTAG	4 cut(s)	1155, 1229, 1332, 1397
MaeII	ACGT	2 cut(s)	405, 591
MaeIII	GTNAC	6 cut(s)	457, 592, 835, 988, 1255, 1283
MalI	GATC	9 cut(s)	209, 495, 500, 515, 550, 729, 829, 1087, 1139
MboI	GATC	9 cut(s)	207, 493, 498, 513, 548, 727, 827, 1085, 1137
MboII	GAAGA	3 cut(s)	17, 67, 876
MflI	RGATCY	4 cut(s)	207, 513, 827, 1137
MhlI	GDGCHC	5 cut(s)	205, 637, 1030, 1105, 1324
MlsI	TGGCCA	1 cut(s)	192
MluCI	AATT	7 cut(s)	142, 161, 186, 247, 1091, 1233, 1315
MluNI	TGGCCA	1 cut(s)	192
MlyI	GAGTC	1 cut(s)	136
MmeI	TCCRAC	4 cut(s)	378, 880, 984, 1162
Mox20I	TGGCCA	1 cut(s)	192
MscI	TGGCCA	1 cut(s)	192
MseI	TTAA	2 cut(s)	1296, 1459
MslI	CAYNNNNRTG	3 cut(s)	198, 266, 1290
Msp20I	TGGCCA	1 cut(s)	192
MspA1I	CMGCKG	2 cut(s)	1043, 1279
MspI	CCGG	8 cut(s)	374, 388, 410, 415, 699, 746, 915, 993
MspR9I	CCNGG	9 cut(s)	374, 415, 416, 472, 570, 700, 832, 916, 1051
MvaI	CCWGG	4 cut(s)	472, 570, 832, 1051
MvnI	CGCG	3 cut(s)	603, 770, 1078
MwoI	GCNNNNNNNGC	3 cut(s)	664, 1319, 1328
NciI	CCSGG	5 cut(s)	374, 415, 416, 700, 916
NdeII	GATC	9 cut(s)	207, 493, 498, 513, 548, 727, 827, 1085, 1137
NheI	GCTAGC	1 cut(s)	1228
NlaIII	CATG	5 cut(s)	134, 271, 331, 1137, 1263
NlaIV	GGNNCC	2 cut(s)	829, 1103
NmeAIII	GCCGAG	1 cut(s)	822
NmuCI	GTSAC	5 cut(s)	457, 592, 835, 988, 1283
NspI	RCATGY	1 cut(s)	1263
OliI	CACNNNNGTG	1 cut(s)	198
PaeR7I	CTCGAG	1 cut(s)	858
PaqCI	CACCTGC	1 cut(s)	1007
PciI	ACATGT	1 cut(s)	1259
PfeI	GAWTC	1 cut(s)	945
PkrI	GCNGC	9 cut(s)	140, 180, 286, 618, 1042, 1045, 1149, 1152, 1200
Ple19I	CGATCG	1 cut(s)	496
PleI	GAGTC	1 cut(s)	135
PpsI	GAGTC	1 cut(s)	135
PscI	ACATGT	1 cut(s)	1259
Psp6I	CCWGG	4 cut(s)	470, 568, 830, 1049
PspEI	GGTNACC	1 cut(s)	988
PspGI	CCWGG	4 cut(s)	470, 568, 830, 1049
PspN4I	GGNNCC	2 cut(s)	829, 1103
PspOMI	GGGCCC	1 cut(s)	1101
PspPI	GGNCC	6 cut(s)	331, 412, 468, 701, 1101, 1102
PspXI	VCTCGAGB	1 cut(s)	858
PsuI	RGATCY	4 cut(s)	207, 513, 827, 1137
PvuI	CGATCG	1 cut(s)	496
RsaI	GTAC	2 cut(s)	22, 1081
RsaNI	GTAC	2 cut(s)	21, 1080
RseI	CAYNNNNRTG	3 cut(s)	198, 266, 1290
SalI	GTCGAC	1 cut(s)	257
SaqAI	TTAA	2 cut(s)	1296, 1459
SatI	GCNGC	9 cut(s)	139, 179, 285, 617, 1041, 1044, 1148, 1151, 1199
Sau3AI	GATC	9 cut(s)	207, 493, 498, 513, 548, 727, 827, 1085, 1137
Sau96I	GGNCC	6 cut(s)	331, 412, 468, 701, 1101, 1102
SchI	GAGTC	1 cut(s)	136
ScrFI	CCNGG	9 cut(s)	374, 415, 416, 472, 570, 700, 832, 916, 1051
SduI	GDGCHC	5 cut(s)	205, 637, 1030, 1105, 1324
SexAI	ACCWGGT	1 cut(s)	1049
SfaNI	GCATC	6 cut(s)	421, 861, 895, 1003, 1210, 1390
SfcI	CTRYAG	1 cut(s)	1362
Sfr274I	CTCGAG	1 cut(s)	858
SinI	GGWCC	2 cut(s)	331, 468
SlaI	CTCGAG	1 cut(s)	858
SmaI	CCCGGG	1 cut(s)	416
SmiMI	CAYNNNNRTG	3 cut(s)	198, 266, 1290
SmlI	CTYRAG	2 cut(s)	124, 858
SmoI	CTYRAG	2 cut(s)	124, 858
Sse9I	AATT	7 cut(s)	142, 161, 186, 247, 1091, 1233, 1315
SspI	AATATT	1 cut(s)	243
SspMI	CTAG	4 cut(s)	1155, 1229, 1332, 1397
StyD4I	CCNGG	9 cut(s)	372, 413, 414, 470, 568, 698, 830, 914, 1049
StyI	CCWWGG	2 cut(s)	334, 1071
TaaI	ACNGT	5 cut(s)	25, 359, 463, 1112, 1452
TaiI	ACGT	2 cut(s)	408, 594
TaqI	TCGA	8 cut(s)	252, 258, 501, 518, 730, 859, 1264, 1447
TasI	AATT	7 cut(s)	142, 161, 186, 247, 1091, 1233, 1315
TauI	GCSGC	3 cut(s)	1046, 1153, 1201
TfiI	GAWTC	1 cut(s)	945
Tru1I	TTAA	2 cut(s)	1296, 1459
Tru9I	TTAA	2 cut(s)	1296, 1459
TscAI	CASTG	5 cut(s)	100, 200, 644, 915, 1292
TseFI	GTSAC	5 cut(s)	457, 592, 835, 988, 1283
TseI	GCWGC	6 cut(s)	138, 178, 284, 616, 1040, 1147
Tsp45I	GTSAC	5 cut(s)	457, 592, 835, 988, 1283
TspDTI	ATGAA	2 cut(s)	1122, 1445
TspGWI	ACGGA	2 cut(s)	318, 1020
TspMI	CCCGGG	1 cut(s)	414
TspRI	CASTG	5 cut(s)	100, 200, 644, 915, 1292
VneI	GTGCAC	1 cut(s)	1320
VpaK11BI	GGWCC	2 cut(s)	331, 468
XagI	CCTNNNNNAGG	1 cut(s)	573
XapI	RAATTY	1 cut(s)	161
XbaI	TCTAGA	1 cut(s)	1396
XceI	RCATGY	1 cut(s)	1263
XhoI	CTCGAG	1 cut(s)	858
XmaI	CCCGGG	1 cut(s)	414
XmiI	GTMKAC	2 cut(s)	149, 258
XspI	CTAG	4 cut(s)	1155, 1229, 1332, 1397

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.