Domain associated at C-terminal with AAA
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g12131 FvH4_1g12133 FvH4_1g12134 |
| malus_domestica | MD15G1253100.v1.1 MD15G1253200.v1.1 MD15G1253400.v1.1 MD15G1254000.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0099811 RchiOBHm_Chr2g0099831 RchiOBHm_Chr2g0099841 |
| rosa_laevigata | RLG00000016916 RLG00000016917 RLG00000016918 |
| rosa_multiflora | Rmu_co8276881.1_g000001 Rmu_sc0004158.1_g000001 Rmu_sc0004158.1_g000002 Rmu_sc0004158.1_g000003 Rmu_sc0004158.1_g000004 Rmu_sc0008864.1_g000006 Rmu_sc0008864.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00142760 |
| rosa_rugosa | Rorug02G0083400.1 Rorug02G0083500 |
| rosa_samantha | Rh2BG135700 Rh2BG135900 Rh2BG136000 Rh2CG137300 Rh2CG137500 Rh2CG137600 Rh2DG137700 Rh2DG137900 Rh2DG138000 |
| rosa_wichuraiana | Rw2G010280 Rw2G010300 Rw2G010310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 3 cut(s) | 222, 971, 1090 |
| AccII | CGCG | 1 cut(s) | 240 |
| AccIII | TCCGGA | 1 cut(s) | 251 |
| AciI | CCGC | 7 cut(s) | 240, 291, 490, 881, 1125, 1189, 1344 |
| AclI | AACGTT | 1 cut(s) | 622 |
| AclWI | GGATC | 2 cut(s) | 1017, 1030 |
| AcoI | YGGCCR | 1 cut(s) | 882 |
| AcsI | RAATTY | 2 cut(s) | 25, 1212 |
| AcuI | CTGAAG | 2 cut(s) | 770, 1448 |
| AfaI | GTAC | 2 cut(s) | 542, 859 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 86, 647, 680, 860, 1032, 1239, 1348 |
| AflIII | ACRYGT | 1 cut(s) | 93 |
| AgsI | TTSAA | 4 cut(s) | 115, 166, 1313, 1409 |
| AjnI | CCWGG | 3 cut(s) | 135, 186, 1192 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1455, 1487 |
| AluBI | AGCT | 6 cut(s) | 200, 601, 716, 748, 873, 1363 |
| AluI | AGCT | 6 cut(s) | 200, 601, 716, 748, 873, 1363 |
| Alw21I | GWGCWC | 2 cut(s) | 711, 1331 |
| Alw26I | GTCTC | 2 cut(s) | 719, 1439 |
| AlwI | GGATC | 2 cut(s) | 1017, 1030 |
| Ama87I | CYCGRG | 2 cut(s) | 1084, 1442 |
| Aor13HI | TCCGGA | 1 cut(s) | 251 |
| AoxI | GGCC | 6 cut(s) | 69, 288, 564, 882, 960, 1190 |
| ApeKI | GCWGC | 2 cut(s) | 1014, 1186 |
| ApoI | RAATTY | 2 cut(s) | 25, 1212 |
| AseI | ATTAAT | 1 cut(s) | 1500 |
| AspA2I | CCTAGG | 1 cut(s) | 509 |
| AspLEI | GCGC | 2 cut(s) | 273, 438 |
| AspS9I | GGNCC | 3 cut(s) | 190, 671, 848 |
| AsuC2I | CCSGG | 2 cut(s) | 855, 1034 |
| AsuHPI | GGTGA | 7 cut(s) | 337, 394, 1139, 1141, 1286, 1330, 1391 |
| AsuII | TTCGAA | 1 cut(s) | 340 |
| AvaI | CYCGRG | 2 cut(s) | 1084, 1442 |
| AvaII | GGWCC | 3 cut(s) | 190, 671, 848 |
| AvrII | CCTAGG | 1 cut(s) | 509 |
| BaeGI | GKGCMC | 1 cut(s) | 490 |
| BamHI | GGATCC | 1 cut(s) | 1022 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 818, 850 |
| BauI | CACGAG | 1 cut(s) | 645 |
| BbsI | GAAGAC | 1 cut(s) | 48 |
| Bbv12I | GWGCWC | 2 cut(s) | 711, 1331 |
| BbvCI | CCTCAGC | 1 cut(s) | 294 |
| BbvI | GCAGC | 2 cut(s) | 1026, 1173 |
| BccI | CCATC | 3 cut(s) | 471, 1100, 1315 |
| BceAI | ACGGC | 2 cut(s) | 365, 1184 |
| BciT130I | CCWGG | 3 cut(s) | 137, 188, 1194 |
| BclI | TGATCA | 2 cut(s) | 478, 759 |
| BcnI | CCSGG | 2 cut(s) | 855, 1034 |
| BcoDI | GTCTC | 2 cut(s) | 719, 1439 |
| BfaI | CTAG | 4 cut(s) | 231, 510, 1172, 1236 |
| BfmI | CTRYAG | 1 cut(s) | 469 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 240 |
| BglII | AGATCT | 1 cut(s) | 700 |
| BisI | GCNGC | 6 cut(s) | 241, 291, 882, 1015, 1187, 1190 |
| BlnI | CCTAGG | 1 cut(s) | 509 |
| BlpI | GCTNAGC | 1 cut(s) | 267 |
| BlsI | GCNGC | 6 cut(s) | 242, 292, 883, 1016, 1188, 1191 |
| Bme1390I | CCNGG | 5 cut(s) | 137, 188, 855, 1034, 1194 |
| Bme18I | GGWCC | 3 cut(s) | 190, 671, 848 |
| BmeT110I | CYCGRG | 2 cut(s) | 1084, 1442 |
| BmgT120I | GGNCC | 3 cut(s) | 190, 671, 848 |
| BmiI | GGNNCC | 3 cut(s) | 192, 741, 1024 |
| BmrFI | CCNGG | 5 cut(s) | 137, 188, 855, 1034, 1194 |
| BmsI | GCATC | 5 cut(s) | 30, 183, 571, 1381, 1514 |
| BpiI | GAAGAC | 1 cut(s) | 48 |
| Bpu10I | CCTNAGC | 3 cut(s) | 294, 561, 1252 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 267 |
| Bpu14I | TTCGAA | 1 cut(s) | 340 |
| BpuEI | CTTGAG | 3 cut(s) | 180, 581, 725 |
| BpuMI | CCSGG | 2 cut(s) | 855, 1034 |
| BsaBI | GATNNNNATC | 1 cut(s) | 462 |
| BsaI | GGTCTC | 1 cut(s) | 1439 |
| BsaJI | CCNNGG | 4 cut(s) | 509, 567, 885, 1267 |
| BsaWI | WCCGGW | 1 cut(s) | 251 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 86, 647, 680, 860, 1032, 1239, 1348 |
| Bse1I | ACTGG | 2 cut(s) | 865, 930 |
| Bse3DI | GCAATG | 4 cut(s) | 57, 741, 949, 1181 |
| Bse8I | GATNNNNATC | 1 cut(s) | 462 |
| BseAI | TCCGGA | 1 cut(s) | 251 |
| BseBI | CCWGG | 3 cut(s) | 137, 188, 1194 |
| BseDI | CCNNGG | 4 cut(s) | 509, 567, 885, 1267 |
| BseGI | GGATG | 2 cut(s) | 543, 762 |
| BseJI | GATNNNNATC | 1 cut(s) | 462 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 86, 647, 680, 860, 1032, 1239, 1348 |
| BseMI | GCAATG | 4 cut(s) | 57, 741, 949, 1181 |
| BseMII | CTCAG | 3 cut(s) | 281, 285, 575 |
| BseNI | ACTGG | 2 cut(s) | 865, 930 |
| BseRI | GAGGAG | 4 cut(s) | 206, 238, 805, 1373 |
| BseSI | GKGCMC | 1 cut(s) | 490 |
| BseXI | GCAGC | 2 cut(s) | 1026, 1173 |
| BseYI | CCCAGC | 1 cut(s) | 712 |
| Bsh1236I | CGCG | 1 cut(s) | 240 |
| BshFI | GGCC | 6 cut(s) | 71, 290, 566, 884, 962, 1192 |
| BsiHKAI | GWGCWC | 2 cut(s) | 711, 1331 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1084, 1442 |
| BsiSI | CCGG | 4 cut(s) | 252, 743, 855, 1033 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 86, 647, 680, 860, 1032, 1239, 1348 |
| BsmAI | GTCTC | 2 cut(s) | 719, 1439 |
| BsmI | GAATGC | 1 cut(s) | 1272 |
| BsnI | GGCC | 6 cut(s) | 71, 290, 566, 884, 962, 1192 |
| Bso31I | GGTCTC | 1 cut(s) | 1439 |
| BsoBI | CYCGRG | 2 cut(s) | 1084, 1442 |
| Bsp119I | TTCGAA | 1 cut(s) | 340 |
| Bsp1286I | GDGCHC | 3 cut(s) | 490, 711, 1331 |
| Bsp13I | TCCGGA | 1 cut(s) | 251 |
| Bsp143I | GATC | 6 cut(s) | 315, 441, 478, 700, 759, 1022 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 267 |
| Bsp19I | CCATGG | 1 cut(s) | 885 |
| BspACI | CCGC | 7 cut(s) | 240, 291, 490, 881, 1125, 1189, 1344 |
| BspANI | GGCC | 6 cut(s) | 71, 290, 566, 884, 962, 1192 |
| BspCNI | CTCAG | 3 cut(s) | 280, 286, 574 |
| BspEI | TCCGGA | 1 cut(s) | 251 |
| BspFNI | CGCG | 1 cut(s) | 240 |
| BspLI | GGNNCC | 3 cut(s) | 192, 741, 1024 |
| BspPI | GGATC | 2 cut(s) | 1017, 1030 |
| BspT104I | TTCGAA | 1 cut(s) | 340 |
| BspTNI | GGTCTC | 1 cut(s) | 1439 |
| BsrDI | GCAATG | 4 cut(s) | 57, 741, 949, 1181 |
| BsrI | ACTGG | 2 cut(s) | 865, 930 |
| BssECI | CCNNGG | 4 cut(s) | 509, 567, 885, 1267 |
| BssMI | GATC | 6 cut(s) | 315, 441, 478, 700, 759, 1022 |
| BssSI | CACGAG | 1 cut(s) | 645 |
| BssT1I | CCWWGG | 3 cut(s) | 509, 885, 1267 |
| Bst2BI | CACGAG | 1 cut(s) | 645 |
| Bst2UI | CCWGG | 3 cut(s) | 137, 188, 1194 |
| Bst4CI | ACNGT | 2 cut(s) | 227, 473 |
| Bst6I | CTCTTC | 4 cut(s) | 746, 782, 821, 1461 |
| BstBI | TTCGAA | 1 cut(s) | 340 |
| BstC8I | GCNNGC | 1 cut(s) | 490 |
| BstDEI | CTNAG | 4 cut(s) | 267, 294, 561, 1252 |
| BstDSI | CCRYGG | 1 cut(s) | 885 |
| BstF5I | GGATG | 2 cut(s) | 543, 762 |
| BstFNI | CGCG | 1 cut(s) | 240 |
| BstHHI | GCGC | 2 cut(s) | 273, 438 |
| BstKTI | GATC | 6 cut(s) | 318, 444, 481, 703, 762, 1025 |
| BstMAI | GTCTC | 2 cut(s) | 719, 1439 |
| BstMBI | GATC | 6 cut(s) | 315, 441, 478, 700, 759, 1022 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 83, 240, 887, 1400, 1438 |
| BstNI | CCWGG | 3 cut(s) | 137, 188, 1194 |
| BstNSI | RCATGY | 1 cut(s) | 97 |
| BstSCI | CCNGG | 5 cut(s) | 135, 186, 853, 1032, 1192 |
| BstSFI | CTRYAG | 1 cut(s) | 469 |
| BstSLI | GKGCMC | 1 cut(s) | 490 |
| BstUI | CGCG | 1 cut(s) | 240 |
| BstV1I | GCAGC | 2 cut(s) | 1026, 1173 |
| BstV2I | GAAGAC | 1 cut(s) | 48 |
| BstX2I | RGATCY | 2 cut(s) | 700, 1022 |
| BstYI | RGATCY | 2 cut(s) | 700, 1022 |
| BsuRI | GGCC | 6 cut(s) | 71, 290, 566, 884, 962, 1192 |
| BtgI | CCRYGG | 1 cut(s) | 885 |
| BtsCI | GGATG | 2 cut(s) | 543, 762 |
| Cac8I | GCNNGC | 1 cut(s) | 490 |
| CfoI | GCGC | 2 cut(s) | 273, 438 |
| Cfr13I | GGNCC | 3 cut(s) | 190, 671, 848 |
| CsiI | ACCWGGT | 1 cut(s) | 135 |
| Csp6I | GTAC | 2 cut(s) | 541, 858 |
| CviAII | CATG | 4 cut(s) | 94, 284, 439, 886 |
| CviQI | GTAC | 2 cut(s) | 541, 858 |
| DdeI | CTNAG | 4 cut(s) | 267, 294, 561, 1252 |
| DpnI | GATC | 6 cut(s) | 317, 443, 480, 702, 761, 1024 |
| DpnII | GATC | 6 cut(s) | 315, 441, 478, 700, 759, 1022 |
| EaeI | YGGCCR | 1 cut(s) | 882 |
| Eam1104I | CTCTTC | 4 cut(s) | 746, 782, 821, 1461 |
| EarI | CTCTTC | 4 cut(s) | 746, 782, 821, 1461 |
| Eco130I | CCWWGG | 3 cut(s) | 509, 885, 1267 |
| Eco147I | AGGCCT | 1 cut(s) | 962 |
| Eco31I | GGTCTC | 1 cut(s) | 1439 |
| Eco47I | GGWCC | 3 cut(s) | 190, 671, 848 |
| Eco57I | CTGAAG | 2 cut(s) | 770, 1448 |
| Eco88I | CYCGRG | 2 cut(s) | 1084, 1442 |
| EcoRII | CCWGG | 3 cut(s) | 135, 186, 1192 |
| EcoT14I | CCWWGG | 3 cut(s) | 509, 885, 1267 |
| EcoT22I | ATGCAT | 1 cut(s) | 1507 |
| ErhI | CCWWGG | 3 cut(s) | 509, 885, 1267 |
| FaeI | CATG | 4 cut(s) | 97, 287, 442, 889 |
| FatI | CATG | 4 cut(s) | 93, 283, 438, 885 |
| FauI | CCCGC | 2 cut(s) | 497, 1351 |
| FauNDI | CATATG | 1 cut(s) | 1218 |
| FbaI | TGATCA | 2 cut(s) | 478, 759 |
| FblI | GTMKAC | 3 cut(s) | 222, 971, 1090 |
| Fnu4HI | GCNGC | 6 cut(s) | 241, 291, 882, 1015, 1187, 1190 |
| FokI | GGATG | 2 cut(s) | 530, 769 |
| Fsp4HI | GCNGC | 6 cut(s) | 241, 291, 882, 1015, 1187, 1190 |
| FspBI | CTAG | 4 cut(s) | 231, 510, 1172, 1236 |
| GlaI | GCGC | 2 cut(s) | 272, 437 |
| GluI | GCNGC | 6 cut(s) | 241, 291, 882, 1015, 1187, 1190 |
| GsaI | CCCAGC | 1 cut(s) | 716 |
| HaeIII | GGCC | 6 cut(s) | 71, 290, 566, 884, 962, 1192 |
| HapII | CCGG | 4 cut(s) | 252, 743, 855, 1033 |
| HhaI | GCGC | 2 cut(s) | 273, 438 |
| Hin1II | CATG | 4 cut(s) | 97, 287, 442, 889 |
| Hin6I | GCGC | 2 cut(s) | 271, 436 |
| HinP1I | GCGC | 2 cut(s) | 271, 436 |
| HincII | GTYRAC | 3 cut(s) | 223, 501, 1030 |
| HindII | GTYRAC | 3 cut(s) | 223, 501, 1030 |
| HindIII | AAGCTT | 1 cut(s) | 599 |
| HinfI | GANTC | 5 cut(s) | 255, 342, 536, 592, 1037 |
| HpaI | GTTAAC | 2 cut(s) | 501, 1030 |
| HpaII | CCGG | 4 cut(s) | 252, 743, 855, 1033 |
| HphI | GGTGA | 7 cut(s) | 337, 394, 1139, 1141, 1286, 1330, 1391 |
| Hpy166II | GTNNAC | 8 cut(s) | 223, 501, 851, 972, 1030, 1077, 1091, 1149 |
| Hpy188I | TCNGA | 5 cut(s) | 324, 483, 1066, 1428, 1510 |
| Hpy188III | TCNNGA | 8 cut(s) | 252, 704, 724, 784, 1277, 1304, 1406, 1444 |
| Hpy8I | GTNNAC | 8 cut(s) | 223, 501, 851, 972, 1030, 1077, 1091, 1149 |
| Hpy99I | CGWCG | 2 cut(s) | 224, 1106 |
| HpyAV | CCTTC | 5 cut(s) | 91, 684, 952, 1307, 1403 |
| HpyCH4III | ACNGT | 2 cut(s) | 227, 473 |
| HpyCH4IV | ACGT | 2 cut(s) | 615, 622 |
| HpyCH4V | TGCA | 7 cut(s) | 31, 584, 1014, 1181, 1210, 1230, 1505 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 83, 240, 887, 1400, 1438 |
| HpyF3I | CTNAG | 4 cut(s) | 267, 294, 561, 1252 |
| HpySE526I | ACGT | 2 cut(s) | 615, 622 |
| Hsp92II | CATG | 4 cut(s) | 97, 287, 442, 889 |
| HspAI | GCGC | 2 cut(s) | 271, 436 |
| Kpn2I | TCCGGA | 1 cut(s) | 251 |
| Ksp22I | TGATCA | 2 cut(s) | 478, 759 |
| KspAI | GTTAAC | 2 cut(s) | 501, 1030 |
| Kzo9I | GATC | 6 cut(s) | 315, 441, 478, 700, 759, 1022 |
| LmnI | GCTCC | 4 cut(s) | 108, 739, 745, 1360 |
| Lsp1109I | GCAGC | 2 cut(s) | 1026, 1173 |
| LweI | GCATC | 5 cut(s) | 30, 183, 571, 1381, 1514 |
| MabI | ACCWGGT | 1 cut(s) | 135 |
| MaeI | CTAG | 4 cut(s) | 231, 510, 1172, 1236 |
| MaeII | ACGT | 2 cut(s) | 615, 622 |
| MaeIII | GTNAC | 2 cut(s) | 89, 382 |
| MalI | GATC | 6 cut(s) | 317, 443, 480, 702, 761, 1024 |
| MboI | GATC | 6 cut(s) | 315, 441, 478, 700, 759, 1022 |
| MfeI | CAATTG | 1 cut(s) | 685 |
| MflI | RGATCY | 2 cut(s) | 700, 1022 |
| MhlI | GDGCHC | 3 cut(s) | 490, 711, 1331 |
| MluCI | AATT | 6 cut(s) | 6, 25, 121, 685, 1212, 1308 |
| MlyI | GAGTC | 2 cut(s) | 530, 586 |
| MmeI | TCCRAC | 1 cut(s) | 513 |
| Mph1103I | ATGCAT | 1 cut(s) | 1507 |
| MroI | TCCGGA | 1 cut(s) | 251 |
| MseI | TTAA | 9 cut(s) | 9, 423, 500, 576, 618, 906, 1029, 1245, 1500 |
| MslI | CAYNNNNRTG | 2 cut(s) | 50, 98 |
| MspA1I | CMGCKG | 1 cut(s) | 293 |
| MspI | CCGG | 4 cut(s) | 252, 743, 855, 1033 |
| MspR9I | CCNGG | 5 cut(s) | 137, 188, 855, 1034, 1194 |
| MunI | CAATTG | 1 cut(s) | 685 |
| Mva1269I | GAATGC | 1 cut(s) | 1272 |
| MvaI | CCWGG | 3 cut(s) | 137, 188, 1194 |
| MvnI | CGCG | 1 cut(s) | 240 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 83, 240, 887, 1400, 1438 |
| NciI | CCSGG | 2 cut(s) | 855, 1034 |
| NcoI | CCATGG | 1 cut(s) | 885 |
| NdeI | CATATG | 1 cut(s) | 1218 |
| NdeII | GATC | 6 cut(s) | 315, 441, 478, 700, 759, 1022 |
| NlaIII | CATG | 4 cut(s) | 97, 287, 442, 889 |
| NlaIV | GGNNCC | 3 cut(s) | 192, 741, 1024 |
| NmeAIII | GCCGAG | 2 cut(s) | 47, 592 |
| NsiI | ATGCAT | 1 cut(s) | 1507 |
| NspI | RCATGY | 1 cut(s) | 97 |
| NspV | TTCGAA | 1 cut(s) | 340 |
| PaeR7I | CTCGAG | 1 cut(s) | 1442 |
| PceI | AGGCCT | 1 cut(s) | 962 |
| PciI | ACATGT | 1 cut(s) | 93 |
| PctI | GAATGC | 1 cut(s) | 1272 |
| PfeI | GAWTC | 3 cut(s) | 255, 342, 1037 |
| PfoI | TCCNGGA | 1 cut(s) | 186 |
| PkrI | GCNGC | 6 cut(s) | 242, 292, 883, 1016, 1188, 1191 |
| PleI | GAGTC | 2 cut(s) | 530, 586 |
| PpsI | GAGTC | 2 cut(s) | 530, 586 |
| PscI | ACATGT | 1 cut(s) | 93 |
| PshBI | ATTAAT | 1 cut(s) | 1500 |
| Psp1406I | AACGTT | 1 cut(s) | 622 |
| Psp6I | CCWGG | 3 cut(s) | 135, 186, 1192 |
| PspFI | CCCAGC | 1 cut(s) | 712 |
| PspGI | CCWGG | 3 cut(s) | 135, 186, 1192 |
| PspN4I | GGNNCC | 3 cut(s) | 192, 741, 1024 |
| PspPI | GGNCC | 3 cut(s) | 190, 671, 848 |
| PsuI | RGATCY | 2 cut(s) | 700, 1022 |
| RsaI | GTAC | 2 cut(s) | 542, 859 |
| RsaNI | GTAC | 2 cut(s) | 541, 858 |
| RseI | CAYNNNNRTG | 2 cut(s) | 50, 98 |
| SalI | GTCGAC | 1 cut(s) | 221 |
| SaqAI | TTAA | 9 cut(s) | 9, 423, 500, 576, 618, 906, 1029, 1245, 1500 |
| SatI | GCNGC | 6 cut(s) | 241, 291, 882, 1015, 1187, 1190 |
| Sau3AI | GATC | 6 cut(s) | 315, 441, 478, 700, 759, 1022 |
| Sau96I | GGNCC | 3 cut(s) | 190, 671, 848 |
| SchI | GAGTC | 2 cut(s) | 530, 586 |
| ScrFI | CCNGG | 5 cut(s) | 137, 188, 855, 1034, 1194 |
| SduI | GDGCHC | 3 cut(s) | 490, 711, 1331 |
| SexAI | ACCWGGT | 1 cut(s) | 135 |
| SfaNI | GCATC | 5 cut(s) | 30, 183, 571, 1381, 1514 |
| SfcI | CTRYAG | 1 cut(s) | 469 |
| Sfr274I | CTCGAG | 1 cut(s) | 1442 |
| SfuI | TTCGAA | 1 cut(s) | 340 |
| SinI | GGWCC | 3 cut(s) | 190, 671, 848 |
| SlaI | CTCGAG | 1 cut(s) | 1442 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 50, 98 |
| SmlI | CTYRAG | 4 cut(s) | 195, 596, 704, 1442 |
| SmoI | CTYRAG | 4 cut(s) | 195, 596, 704, 1442 |
| Sse9I | AATT | 6 cut(s) | 6, 25, 121, 685, 1212, 1308 |
| SseBI | AGGCCT | 1 cut(s) | 962 |
| SsiI | CCGC | 7 cut(s) | 240, 291, 490, 881, 1125, 1189, 1344 |
| SspMI | CTAG | 4 cut(s) | 231, 510, 1172, 1236 |
| StuI | AGGCCT | 1 cut(s) | 962 |
| StyD4I | CCNGG | 5 cut(s) | 135, 186, 853, 1032, 1192 |
| StyI | CCWWGG | 3 cut(s) | 509, 885, 1267 |
| TaaI | ACNGT | 2 cut(s) | 227, 473 |
| TaiI | ACGT | 2 cut(s) | 618, 625 |
| TaqI | TCGA | 6 cut(s) | 222, 340, 723, 1104, 1198, 1443 |
| TasI | AATT | 6 cut(s) | 6, 25, 121, 685, 1212, 1308 |
| TauI | GCSGC | 4 cut(s) | 243, 293, 884, 1192 |
| TfiI | GAWTC | 3 cut(s) | 255, 342, 1037 |
| Tru1I | TTAA | 9 cut(s) | 9, 423, 500, 576, 618, 906, 1029, 1245, 1500 |
| Tru9I | TTAA | 9 cut(s) | 9, 423, 500, 576, 618, 906, 1029, 1245, 1500 |
| TseI | GCWGC | 2 cut(s) | 1014, 1186 |
| TspDTI | ATGAA | 2 cut(s) | 115, 1205 |
| TspGWI | ACGGA | 3 cut(s) | 437, 684, 1015 |
| VpaK11BI | GGWCC | 3 cut(s) | 190, 671, 848 |
| VspI | ATTAAT | 1 cut(s) | 1500 |
| XapI | RAATTY | 2 cut(s) | 25, 1212 |
| XceI | RCATGY | 1 cut(s) | 97 |
| XhoI | CTCGAG | 1 cut(s) | 1442 |
| XmaJI | CCTAGG | 1 cut(s) | 509 |
| XmiI | GTMKAC | 3 cut(s) | 222, 971, 1090 |
| XspI | CTAG | 4 cut(s) | 231, 510, 1172, 1236 |
| Zsp2I | ATGCAT | 1 cut(s) | 1507 |