Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0003681

Physical Location & Seq

Genomic Coordinates Reverse (-)

11515832 .. 11517578

Gene Structure 1747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG137700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGAGGAGCAATATTATGATGACCACAGCAATTCCAATTTCAAAGATATAATGCCCACAGCTATATCCTCCTTTTTCTCGGCCTATGCCCCCTTTGCTGGTTACATGTTTATGCTCCAATCCATGAACACCAATTTCCTCCCTTACGAGTTTAACTCATACGTATACTCGTACTTAAAATCAAGCCTCAGCTACCTCTTGGACCCTCAAGCCAATCACATAACGCTCCTCATCGACAACTCTAGCGATGAAGACTACTCGGACGAAATCTATGATTCTGCTGAGGTCTATCTTGCGACCAAGATCAACCCGAAAACCCAAATCTTTCGAATTAGCAAAGCACCAAAACAAAAGGTCCCCATCCTTGGTGTTACCACCAACCAAGAAATCACTGACACTTTCGAAGACATTAACGTGAAGTGGCGGATGATCTTCCCTAAAGAAAACGATGGTTACTACAGTAGCGTCTATAAGAGCCGCATGGAGCTAACATTCCACAGGAAACACAAAGACAAAGTTATAAACTCGTACATCCCCTATGTGTTGGCTCGGGCCAAGGCTATCAAAGATGCAGAAAAGACTCTGAAGCTTTATAGTTACAATAGTAAACGTTCCTCGGTCTTCAAAATTTCTCGTGGACGCTCTCATGGTTCTGATGACGATGATGACTTTGCACCTTCTTCGGGCAAATGGAGTTGCATCGATCTTGAGCACCCGGCTACTTTTGAGACAATGGCAATGGAGCCGGAGCTGAAGAGGATGATCATAGAGGATTTGGACAAGTTTGTGAAGAGGAGGGAGTTCTACAAGAGAGTTGGTAAGGCTTGGAAGAGAGGTTACTTGTTGTATGGTCCACCCGGTACTGGAAAGTCTAGCTTGGTTGCGGCCATGGCTAATCATCTCCATTTTAATATCTATGACTTGGAACTTACTAGTATTTCCAGCAATGATAAGTTGAGGAAGGCCTTGATGTCTACTACAAATCGTTCTATTGTGGTGTTTGAGGATATTGATTGCAGCAAGGGATCCATAAACCGGGAATCAGCAGAGAAGAAGTTTATGGTTTCCGAAGCCAAGTTTACACTCTCGGGTCTACTGAATGTCGTCGATGGTCTGTGGTCAAGTTGTGGTGATGAGAGGATTATTGTGTTTACCACCAACCACAAGGAGCGGCTAGACCCTGCATTGTTGAGGCCTGGTCGAATGGACATGCACATTCACATGTCGTATTGCACCCCAAAAGGGTTCAAGACCTTGGCTTCAAACTACCTCGGCATTCAGGACACCAGCGAACATCGCCTGTGTGGAGAAATTGAAGCATTGGTGGAAAGCACTAACATCACCCCTGCAGAGGTTTGTGAGGAGCTTATGAGGGGTGGGGGTGATGGTGATGAAGCCGATGCTGCTCTTGAAGGACTTGTCAATTGTCTCAAGCGTAAGAGGCTCGAGACCAACAAGATAGAGGATGAAGAGGTTGGGAAAGCAAAGAGGCAGAAAACAGATTATAATGCATCTGAAATTTCCGAAAATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

511

Amino Acids

58.39

Weight (kDa)

5.93

Isoelectric Point (pI)

47.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	48 - 143	1e-14	Domain associated at C-terminal with AAA
AAA	PF00004	280 - 409	5.7e-20	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	411 - 484	4e-20	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003681)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g12131 FvH4_1g12133 FvH4_1g12134
malus_domestica	MD15G1253100.v1.1 MD15G1253200.v1.1 MD15G1253400.v1.1 MD15G1254000.v1.1
rosa_chinensis	RchiOBHm_Chr2g0099811 RchiOBHm_Chr2g0099831 RchiOBHm_Chr2g0099841
rosa_laevigata	RLG00000016916 RLG00000016917 RLG00000016918
rosa_multiflora	Rmu_co8276881.1_g000001 Rmu_sc0004158.1_g000001 Rmu_sc0004158.1_g000002 Rmu_sc0004158.1_g000003 Rmu_sc0004158.1_g000004 Rmu_sc0008864.1_g000006 Rmu_sc0008864.1_g000007
rosa_roxburghii	Rroxscaffold_2G00142760
rosa_rugosa	Rorug02G0083400.1 Rorug02G0083500
rosa_samantha	Rh2BG135700 Rh2BG135900 Rh2BG136000 Rh2CG137300 Rh2CG137500 Rh2CG137600 Rh2DG137700 Rh2DG137900 Rh2DG138000
rosa_wichuraiana	Rw2G010280 Rw2G010300 Rw2G010310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	521, 1506
AccBSI	CCGCTC	1 cut(s)	1171
AccI	GTMKAC	3 cut(s)	165, 974, 1093
AciI	CCGC	4 cut(s)	424, 478, 884, 1171
AclI	AACGTT	1 cut(s)	610
AclWI	GGATC	2 cut(s)	1020, 1033
AcoI	YGGCCR	1 cut(s)	885
AcsI	RAATTY	2 cut(s)	627, 1518
AcuI	CTGAAG	2 cut(s)	605, 773
AfaI	GTAC	3 cut(s)	173, 530, 862
AfiI	CCNNNNNNNGG	8 cut(s)	98, 365, 683, 863, 1035, 1242, 1351, 1530
AflIII	ACRYGT	2 cut(s)	105, 1221
AgsI	TTSAA	6 cut(s)	43, 625, 1249, 1263, 1316, 1412
AhlI	ACTAGT	1 cut(s)	932
AjnI	CCWGG	1 cut(s)	1195
AluBI	AGCT	7 cut(s)	62, 192, 487, 589, 751, 876, 1366
AluI	AGCT	7 cut(s)	62, 192, 487, 589, 751, 876, 1366
Alw21I	GWGCWC	1 cut(s)	714
Alw26I	GTCTC	3 cut(s)	722, 1433, 1442
AlwI	GGATC	2 cut(s)	1020, 1033
Ama87I	CYCGRG	3 cut(s)	549, 1087, 1445
AoxI	GGCC	5 cut(s)	81, 552, 885, 963, 1193
ApeKI	GCWGC	2 cut(s)	1017, 1403
ApoI	RAATTY	2 cut(s)	627, 1518
AspS9I	GGNCC	4 cut(s)	202, 355, 552, 851
AsuC2I	CCSGG	3 cut(s)	716, 858, 1037
AsuHPI	GGTGA	4 cut(s)	1142, 1333, 1394, 1400
AsuII	TTCGAA	2 cut(s)	328, 402
AvaI	CYCGRG	3 cut(s)	549, 1087, 1445
AvaII	GGWCC	3 cut(s)	202, 355, 851
BamHI	GGATCC	1 cut(s)	1025
BarI	GAAGNNNNNNTAC	2 cut(s)	821, 853
BauI	CACGAG	1 cut(s)	633
BbsI	GAAGAC	3 cut(s)	258, 411, 613
Bbv12I	GWGCWC	1 cut(s)	714
BbvCI	CCTCAGC	2 cut(s)	188, 282
BbvI	GCAGC	2 cut(s)	1029, 1390
BccI	CCATC	4 cut(s)	368, 443, 1103, 1379
BcgI	CGANNNNNNTGC	2 cut(s)	663, 697
BciT130I	CCWGG	1 cut(s)	1197
BclI	TGATCA	1 cut(s)	762
BcnI	CCSGG	3 cut(s)	716, 858, 1037
BcoDI	GTCTC	3 cut(s)	722, 1433, 1442
BcuI	ACTAGT	1 cut(s)	932
BfaI	CTAG	4 cut(s)	243, 873, 933, 1175
BfmI	CTRYAG	2 cut(s)	457, 1347
BisI	GCNGC	5 cut(s)	478, 885, 1018, 1172, 1404
BlsI	GCNGC	5 cut(s)	479, 886, 1019, 1173, 1405
Bme1390I	CCNGG	4 cut(s)	716, 858, 1037, 1197
Bme18I	GGWCC	3 cut(s)	202, 355, 851
BmeT110I	CYCGRG	3 cut(s)	549, 1087, 1445
BmgT120I	GGNCC	4 cut(s)	202, 355, 552, 851
BmiI	GGNNCC	4 cut(s)	204, 357, 744, 1027
BmrFI	CCNGG	4 cut(s)	716, 858, 1037, 1197
BmsI	GCATC	4 cut(s)	559, 708, 1390, 1520
BpiI	GAAGAC	3 cut(s)	258, 411, 613
BplI	GAGNNNNNCTC	2 cut(s)	140, 172
Bpu10I	CCTNAGC	2 cut(s)	188, 282
Bpu14I	TTCGAA	2 cut(s)	328, 402
BpuEI	CTTGAG	3 cut(s)	192, 728, 1415
BpuMI	CCSGG	3 cut(s)	716, 858, 1037
Bsa29I	ATCGAT	1 cut(s)	702
BsaAI	YACGTR	1 cut(s)	163
BsaI	GGTCTC	1 cut(s)	1442
BsaJI	CCNNGG	6 cut(s)	364, 555, 615, 888, 1254, 1270
Bsc4I	CCNNNNNNNGG	8 cut(s)	98, 365, 683, 863, 1035, 1242, 1351, 1530
Bse1I	ACTGG	1 cut(s)	868
Bse3DI	GCAATG	2 cut(s)	744, 952
BseBI	CCWGG	1 cut(s)	1197
BseCI	ATCGAT	1 cut(s)	702
BseDI	CCNNGG	6 cut(s)	364, 555, 615, 888, 1254, 1270
BseGI	GGATG	5 cut(s)	360, 432, 531, 765, 1471
BseLI	CCNNNNNNNGG	8 cut(s)	98, 365, 683, 863, 1035, 1242, 1351, 1530
BseMI	GCAATG	2 cut(s)	744, 952
BseMII	CTCAG	2 cut(s)	202, 273
BseNI	ACTGG	1 cut(s)	868
BseRI	GAGGAG	4 cut(s)	20, 218, 808, 1376
BseXI	GCAGC	2 cut(s)	1029, 1390
BshFI	GGCC	5 cut(s)	83, 554, 887, 965, 1195
BshVI	ATCGAT	1 cut(s)	702
BsiHKAI	GWGCWC	1 cut(s)	714
BsiHKCI	CYCGRG	3 cut(s)	549, 1087, 1445
BsiSI	CCGG	4 cut(s)	716, 746, 858, 1036
BslFI	GGGAC	1 cut(s)	341
BslI	CCNNNNNNNGG	8 cut(s)	98, 365, 683, 863, 1035, 1242, 1351, 1530
BsmAI	GTCTC	3 cut(s)	722, 1433, 1442
BsmFI	GGGAC	1 cut(s)	341
BsmI	GAATGC	1 cut(s)	1275
BsnI	GGCC	5 cut(s)	83, 554, 887, 965, 1195
Bso31I	GGTCTC	1 cut(s)	1442
BsoBI	CYCGRG	3 cut(s)	549, 1087, 1445
Bsp119I	TTCGAA	2 cut(s)	328, 402
Bsp1286I	GDGCHC	1 cut(s)	714
Bsp143I	GATC	5 cut(s)	303, 429, 703, 762, 1025
Bsp19I	CCATGG	1 cut(s)	888
BspACI	CCGC	4 cut(s)	424, 478, 884, 1171
BspANI	GGCC	5 cut(s)	83, 554, 887, 965, 1195
BspCNI	CTCAG	2 cut(s)	201, 274
BspDI	ATCGAT	1 cut(s)	702
BspLI	GGNNCC	4 cut(s)	204, 357, 744, 1027
BspMAI	CTGCAG	1 cut(s)	1351
BspPI	GGATC	2 cut(s)	1020, 1033
BspT104I	TTCGAA	2 cut(s)	328, 402
BspTNI	GGTCTC	1 cut(s)	1442
BsrBI	CCGCTC	1 cut(s)	1171
BsrDI	GCAATG	2 cut(s)	744, 952
BsrI	ACTGG	1 cut(s)	868
BssECI	CCNNGG	6 cut(s)	364, 555, 615, 888, 1254, 1270
BssMI	GATC	5 cut(s)	303, 429, 703, 762, 1025
BssNAI	GTATAC	1 cut(s)	166
BssSI	CACGAG	1 cut(s)	633
BssT1I	CCWWGG	4 cut(s)	364, 555, 888, 1254
Bst1107I	GTATAC	1 cut(s)	166
Bst2BI	CACGAG	1 cut(s)	633
Bst2UI	CCWGG	1 cut(s)	1197
Bst4CI	ACNGT	1 cut(s)	461
Bst6I	CTCTTC	4 cut(s)	749, 785, 824, 1464
BstBAI	YACGTR	1 cut(s)	163
BstBI	TTCGAA	2 cut(s)	328, 402
BstDEI	CTNAG	2 cut(s)	188, 282
BstDSI	CCRYGG	1 cut(s)	888
BstF5I	GGATG	5 cut(s)	360, 432, 531, 765, 1471
BstKTI	GATC	5 cut(s)	306, 432, 706, 765, 1028
BstMAI	GTCTC	3 cut(s)	722, 1433, 1442
BstMBI	GATC	5 cut(s)	303, 429, 703, 762, 1025
BstMWI	GCNNNNNNNGC	5 cut(s)	95, 890, 1296, 1403, 1441
BstNI	CCWGG	1 cut(s)	1197
BstNSI	RCATGY	3 cut(s)	109, 1213, 1225
BstSCI	CCNGG	4 cut(s)	714, 856, 1035, 1195
BstSFI	CTRYAG	2 cut(s)	457, 1347
BstSNI	TACGTA	1 cut(s)	163
BstV1I	GCAGC	2 cut(s)	1029, 1390
BstV2I	GAAGAC	3 cut(s)	258, 411, 613
BstX2I	RGATCY	1 cut(s)	1025
BstYI	RGATCY	1 cut(s)	1025
BstZ17I	GTATAC	1 cut(s)	166
Bsu15I	ATCGAT	1 cut(s)	702
BsuRI	GGCC	5 cut(s)	83, 554, 887, 965, 1195
BsuTUI	ATCGAT	1 cut(s)	702
BtgI	CCRYGG	1 cut(s)	888
BtgZI	GCGATG	2 cut(s)	261, 1280
BtsCI	GGATG	5 cut(s)	360, 432, 531, 765, 1471
BtsIMutI	CAGTG	1 cut(s)	390
Cfr13I	GGNCC	4 cut(s)	202, 355, 552, 851
ClaI	ATCGAT	1 cut(s)	702
CseI	GACGC	2 cut(s)	454, 648
Csp6I	GTAC	3 cut(s)	172, 529, 861
CviAII	CATG	7 cut(s)	106, 124, 481, 647, 889, 1210, 1222
CviQI	GTAC	3 cut(s)	172, 529, 861
DdeI	CTNAG	2 cut(s)	188, 282
DpnI	GATC	5 cut(s)	305, 431, 705, 764, 1027
DpnII	GATC	5 cut(s)	303, 429, 703, 762, 1025
EaeI	YGGCCR	1 cut(s)	885
Eam1104I	CTCTTC	4 cut(s)	749, 785, 824, 1464
EarI	CTCTTC	4 cut(s)	749, 785, 824, 1464
EciI	GGCGGA	1 cut(s)	439
Eco105I	TACGTA	1 cut(s)	163
Eco130I	CCWWGG	4 cut(s)	364, 555, 888, 1254
Eco147I	AGGCCT	2 cut(s)	965, 1195
Eco31I	GGTCTC	1 cut(s)	1442
Eco47I	GGWCC	3 cut(s)	202, 355, 851
Eco57I	CTGAAG	2 cut(s)	605, 773
Eco88I	CYCGRG	3 cut(s)	549, 1087, 1445
EcoO109I	RGGNCCY	1 cut(s)	355
EcoRII	CCWGG	1 cut(s)	1195
EcoT14I	CCWWGG	4 cut(s)	364, 555, 888, 1254
EcoT22I	ATGCAT	1 cut(s)	1513
ErhI	CCWWGG	4 cut(s)	364, 555, 888, 1254
FaeI	CATG	7 cut(s)	109, 127, 484, 650, 892, 1213, 1225
FalI	AAGNNNNNCTT	2 cut(s)	860, 892
FaqI	GGGAC	1 cut(s)	341
FatI	CATG	7 cut(s)	105, 123, 480, 646, 888, 1209, 1221
FbaI	TGATCA	1 cut(s)	762
FblI	GTMKAC	3 cut(s)	165, 974, 1093
Fnu4HI	GCNGC	5 cut(s)	478, 885, 1018, 1172, 1404
FokI	GGATG	5 cut(s)	347, 439, 518, 772, 1478
Fsp4HI	GCNGC	5 cut(s)	478, 885, 1018, 1172, 1404
FspBI	CTAG	4 cut(s)	243, 873, 933, 1175
GluI	GCNGC	5 cut(s)	478, 885, 1018, 1172, 1404
HaeIII	GGCC	5 cut(s)	83, 554, 887, 965, 1195
HapII	CCGG	4 cut(s)	716, 746, 858, 1036
HgaI	GACGC	2 cut(s)	454, 648
Hin1II	CATG	7 cut(s)	109, 127, 484, 650, 892, 1213, 1225
HindIII	AAGCTT	1 cut(s)	587
HinfI	GANTC	3 cut(s)	275, 580, 1040
HpaII	CCGG	4 cut(s)	716, 746, 858, 1036
HphI	GGTGA	4 cut(s)	1142, 1333, 1394, 1400
Hpy166II	GTNNAC	8 cut(s)	166, 608, 638, 854, 975, 1080, 1094, 1152
Hpy188I	TCNGA	6 cut(s)	262, 585, 655, 1069, 1516, 1525
Hpy188III	TCNNGA	5 cut(s)	707, 1249, 1280, 1409, 1447
Hpy8I	GTNNAC	8 cut(s)	166, 608, 638, 854, 975, 1080, 1094, 1152
Hpy99I	CGWCG	1 cut(s)	1109
HpyAV	CCTTC	3 cut(s)	687, 955, 1406
HpyCH4III	ACNGT	1 cut(s)	461
HpyCH4IV	ACGT	3 cut(s)	162, 414, 610
HpyCH4V	TGCA	9 cut(s)	572, 674, 699, 1017, 1184, 1213, 1233, 1349, 1511
HpyF10VI	GCNNNNNNNGC	5 cut(s)	95, 890, 1296, 1403, 1441
HpyF3I	CTNAG	2 cut(s)	188, 282
HpySE526I	ACGT	3 cut(s)	162, 414, 610
Hsp92II	CATG	7 cut(s)	109, 127, 484, 650, 892, 1213, 1225
Ksp22I	TGATCA	1 cut(s)	762
Kzo9I	GATC	5 cut(s)	303, 429, 703, 762, 1025
LmnI	GCTCC	8 cut(s)	7, 120, 231, 484, 742, 748, 1168, 1363
Lsp1109I	GCAGC	2 cut(s)	1029, 1390
LweI	GCATC	4 cut(s)	559, 708, 1390, 1520
MaeI	CTAG	4 cut(s)	243, 873, 933, 1175
MaeII	ACGT	3 cut(s)	162, 414, 610
MaeIII	GTNAC	5 cut(s)	101, 370, 452, 596, 836
MalI	GATC	5 cut(s)	305, 431, 705, 764, 1027
MbiI	CCGCTC	1 cut(s)	1171
MboI	GATC	5 cut(s)	303, 429, 703, 762, 1025
MfeI	CAATTG	1 cut(s)	1423
MflI	RGATCY	1 cut(s)	1025
MhlI	GDGCHC	1 cut(s)	714
MluCI	AATT	9 cut(s)	31, 37, 133, 330, 627, 1311, 1423, 1518, 1528
MlyI	GAGTC	1 cut(s)	574
Mph1103I	ATGCAT	1 cut(s)	1513
MseI	TTAA	4 cut(s)	153, 176, 411, 909
MslI	CAYNNNNRTG	3 cut(s)	110, 413, 1220
MspI	CCGG	4 cut(s)	716, 746, 858, 1036
MspR9I	CCNGG	4 cut(s)	716, 858, 1037, 1197
MunI	CAATTG	1 cut(s)	1423
Mva1269I	GAATGC	1 cut(s)	1275
MvaI	CCWGG	1 cut(s)	1197
MwoI	GCNNNNNNNGC	5 cut(s)	95, 890, 1296, 1403, 1441
NciI	CCSGG	3 cut(s)	716, 858, 1037
NcoI	CCATGG	1 cut(s)	888
NdeII	GATC	5 cut(s)	303, 429, 703, 762, 1025
NlaIII	CATG	7 cut(s)	109, 127, 484, 650, 892, 1213, 1225
NlaIV	GGNNCC	4 cut(s)	204, 357, 744, 1027
NmeAIII	GCCGAG	2 cut(s)	59, 1251
NsiI	ATGCAT	1 cut(s)	1513
NspI	RCATGY	3 cut(s)	109, 1213, 1225
NspV	TTCGAA	2 cut(s)	328, 402
PaeR7I	CTCGAG	1 cut(s)	1445
PceI	AGGCCT	2 cut(s)	965, 1195
PciI	ACATGT	2 cut(s)	105, 1221
PctI	GAATGC	1 cut(s)	1275
PfeI	GAWTC	2 cut(s)	275, 1040
PkrI	GCNGC	5 cut(s)	479, 886, 1019, 1173, 1405
PleI	GAGTC	1 cut(s)	574
PpsI	GAGTC	1 cut(s)	574
Ppu21I	YACGTR	1 cut(s)	163
PpuMI	RGGWCCY	1 cut(s)	355
PscI	ACATGT	2 cut(s)	105, 1221
PsiI	TTATAA	2 cut(s)	521, 1506
Psp1406I	AACGTT	1 cut(s)	610
Psp5II	RGGWCCY	1 cut(s)	355
Psp6I	CCWGG	1 cut(s)	1195
PspGI	CCWGG	1 cut(s)	1195
PspN4I	GGNNCC	4 cut(s)	204, 357, 744, 1027
PspPI	GGNCC	4 cut(s)	202, 355, 552, 851
PspPPI	RGGWCCY	1 cut(s)	355
PstI	CTGCAG	1 cut(s)	1351
PsuI	RGATCY	1 cut(s)	1025
RsaI	GTAC	3 cut(s)	173, 530, 862
RsaNI	GTAC	3 cut(s)	172, 529, 861
RseI	CAYNNNNRTG	3 cut(s)	110, 413, 1220
SaqAI	TTAA	4 cut(s)	153, 176, 411, 909
SatI	GCNGC	5 cut(s)	478, 885, 1018, 1172, 1404
Sau3AI	GATC	5 cut(s)	303, 429, 703, 762, 1025
Sau96I	GGNCC	4 cut(s)	202, 355, 552, 851
SchI	GAGTC	1 cut(s)	574
ScrFI	CCNGG	4 cut(s)	716, 858, 1037, 1197
SduI	GDGCHC	1 cut(s)	714
SfaNI	GCATC	4 cut(s)	559, 708, 1390, 1520
SfcI	CTRYAG	2 cut(s)	457, 1347
Sfr274I	CTCGAG	1 cut(s)	1445
SfuI	TTCGAA	2 cut(s)	328, 402
SinI	GGWCC	3 cut(s)	202, 355, 851
SlaI	CTCGAG	1 cut(s)	1445
SmiMI	CAYNNNNRTG	3 cut(s)	110, 413, 1220
SmlI	CTYRAG	4 cut(s)	207, 707, 1430, 1445
SmoI	CTYRAG	4 cut(s)	207, 707, 1430, 1445
SnaBI	TACGTA	1 cut(s)	163
SpeI	ACTAGT	1 cut(s)	932
Sse9I	AATT	9 cut(s)	31, 37, 133, 330, 627, 1311, 1423, 1518, 1528
SseBI	AGGCCT	2 cut(s)	965, 1195
SsiI	CCGC	4 cut(s)	424, 478, 884, 1171
SspI	AATATT	1 cut(s)	14
SspMI	CTAG	4 cut(s)	243, 873, 933, 1175
StuI	AGGCCT	2 cut(s)	965, 1195
StyD4I	CCNGG	4 cut(s)	714, 856, 1035, 1195
StyI	CCWWGG	4 cut(s)	364, 555, 888, 1254
TaaI	ACNGT	1 cut(s)	461
TaiI	ACGT	3 cut(s)	165, 417, 613
TaqI	TCGA	7 cut(s)	234, 328, 402, 702, 1107, 1201, 1446
TaqII	GACCGA	1 cut(s)	607
TasI	AATT	9 cut(s)	31, 37, 133, 330, 627, 1311, 1423, 1518, 1528
TauI	GCSGC	3 cut(s)	480, 887, 1174
TfiI	GAWTC	2 cut(s)	275, 1040
Tru1I	TTAA	4 cut(s)	153, 176, 411, 909
Tru9I	TTAA	4 cut(s)	153, 176, 411, 909
TscAI	CASTG	1 cut(s)	397
TseI	GCWGC	2 cut(s)	1017, 1403
TspDTI	ATGAA	4 cut(s)	140, 264, 1407, 1482
TspRI	CASTG	1 cut(s)	397
VpaK11BI	GGWCC	3 cut(s)	202, 355, 851
XapI	RAATTY	2 cut(s)	627, 1518
XceI	RCATGY	3 cut(s)	109, 1213, 1225
XhoI	CTCGAG	1 cut(s)	1445
XmiI	GTMKAC	3 cut(s)	165, 974, 1093
XspI	CTAG	4 cut(s)	243, 873, 933, 1175
Zsp2I	ATGCAT	1 cut(s)	1513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.