Rmu_sc0005016.1_g000036

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005016.1
OG0004093
Physical Location & Seq
Reverse (-)
160140 .. 162554
2415 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2415 bp
ctgcctctgcctcgtcctcgtcctcaccctcaccctcttacggtggcggctaaccgttacgccgcccagctgcagctatgctgcccccaacgccccacctcctactctctagcccgaaccatccacgcccacatgatcgcttccggcttccacccacgtggccatatcctcaaccgtttgatcgacgtctactgcaaatcttcaaatcttcgctacgcactccacctgttcgaccaaattcccaacccggacatcgtcgccagaacgactctagtctcggcatattccggcgtcggggacgtcacgctggcccggagagtcttcagtgaaactccgctcagcatgagagacactgttagctacaatgccatgatcgcaggctactctcataacagggacggcaatgccgccgttgagctgtttcgtgacatgaggcaaggcggttttcgccccgatgagtttaccttcaccagcgtgctgagttctctggcgcttatagtggaggaggagaagcaatgcgagcagctgcattgtgcaattgttaagtctggagcattgctggccacttcggtgtcaaatgcgttggtgtctgtgtatgttaagtgtgcttcttcgccgttggtgtcggcgtcctcggtggtggtggctgcagcgaggaaggtgtttgatgaaatgcctatgagagatgagctgtcgtggacgacgatgattactggctatgtgaggaatgaggaccttgatggagctcggcagctgcttgatgggatggatgaaaaattgcaagtggcgtggaatgccatgatttcgggttatgtgcatcacggtttttgtcatgaagcattgaaattgtttagggaaatgcatttaatggggattcgccaggatgagtttacgtacacgagtgttatcagtgcttgtgctaacaatggcttatttaagcatgggaagcagctgcatgcttacatactaagatctgaagcaaaaccgactctggacttttctttatctgtgaataatgcattggtgacactatactttaggtgcggtaaaattgatgaagcacgatatatttttaataatatgtctgtcagagatcttgtttcttggaatgcgatattgtcagggtatgtgagtgcagggcgcattcaggaagcaaagtccttttttgaggaaatgccggaaaggagtggtttaacgtggactgtaataatatctggtttagctcaaaatggatgtggggaagaagctatgaagctatttaaccaaatgagattagatggttttaaaccctgtgattatgcatttgctggagctattacgtcttgtgctgctcttggggcattggagcacggacgccagctccatgctcaactaatatgcttggggcatgattcaagcctttcagtcggaaattcacttattacgatgtatgcgagatgtggggttgtagatgatgctgactttgtgttccttacaatgccttatattgattccgtgtcgtggaatgctatgatcgcagctctggcacaacatggatatggtgtccaagcaataagacttttcgaacaaatgttggaggaagatatactgccagatagaataactttcctcactattctctcagcttgtagtcatgctggtttagttaaagaaggacgccattattttcgtttaatgcatgactcttatggaattgcccctggtgaagatcattatgctcgtatgattgatttgttgtgccgatctggggagttgacagaggccaaggacttaatcaaatcaatgccttttgaaccaggtgcaccgatatgggaggctattctagctggttgccggactcatgggaatatggatttaggtattcaagccgcagaacgactctttgagctggtgccccagcatgatggaacctatgtacttttgtctaacttgtatgctgctttaggccgttgggataatgtggctaaggtgcgaacactaatgagggagcgaggggtgaagaaagaacctggttgtagttggattgatgttgaaaatatggtccatgtcttcttggttggtgatactgtgcaccctgaggtacatgaggtgtacaagtatctagagcaacttgttcttaaaatgaggaagttaggatatgttcctgacacaaagtttgcgttgcatgatatggagtctgagcataaagagaattccttgtctactcacagtgagaagcttgcagttgcatttgggattatgaagcttcctcttggagccacaatcagagtttttaagaatcttaggatttgtggggattgccataatgcatttaagtttatgtcaagagtggttgggagagaaatagtcgtgagagacgccaagaggtttcatcattttaggaaaggcgaatgctcttgtggaaattactggtag

Protein Analysis

804

Amino Acids

89.93

Weight (kDa)

6.84

Isoelectric Point (pI)

33.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 116 - 164 2.8e-14 PPR repeat family
PPR PF01535 119 - 149 1.2e-06 PPR repeat
PPR_2 PF13041 262 - 308 2.6e-12 PPR repeat family
PPR PF01535 262 - 292 3.9e-09 PPR repeat
PPR_2 PF13041 365 - 395 2.1e-06 PPR repeat family
PPR PF01535 367 - 395 4.4e-07 PPR repeat
PPR_2 PF13041 399 - 442 5.3e-07 PPR repeat family
PPR PF01535 399 - 428 8.8e-08 PPR repeat
PPR_2 PF13041 497 - 544 1.4e-10 PPR repeat family
PPR PF01535 499 - 529 3.4e-06 PPR repeat
E_motif PF20431 614 - 676 7.5e-22 E motif
DYW_deaminase PF14432 712 - 804 3.7e-42 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 189, 303
AccB1I GGYRCC 1 cut(s) 1891
AccBSI CCGCTC 1 cut(s) 337
AccI GTMKAC 2 cut(s) 189, 2201
AciI CCGC 7 cut(s) 47, 63, 335, 408, 441, 1044, 1869
AcoI YGGCCR 2 cut(s) 160, 561
AcsI RAATTY 3 cut(s) 237, 1411, 2191
AcuI CTGAAG 2 cut(s) 307, 996
AcvI CACGTG 1 cut(s) 158
AcyI GRCGYC 7 cut(s) 186, 291, 300, 629, 1354, 1657, 2358
AfaI GTAC 4 cut(s) 896, 1917, 2082, 2093
AfiI CCNNNNNNNGG 4 cut(s) 40, 294, 1500, 1747
AgsI TTSAA 6 cut(s) 204, 844, 1395, 1793, 1865, 2033
AjnI CCWGG 4 cut(s) 879, 1699, 1795, 2008
AjuI GAANNNNNNNTTGG 2 cut(s) 1004, 1036
AleI CACNNNNGTG 3 cut(s) 156, 473, 569
Alw21I GWGCWC 4 cut(s) 748, 1350, 1804, 2073
Alw26I GTCTC 3 cut(s) 280, 342, 2349
Alw44I GTGCAC 2 cut(s) 1800, 2069
AoxI GGCC 5 cut(s) 160, 309, 561, 1761, 1945
ApaLI GTGCAC 2 cut(s) 1800, 2069
ApoI RAATTY 3 cut(s) 237, 1411, 2191
ArsI GACNNNNNNTTYG 2 cut(s) 2138, 2170
AspLEI GCGC 2 cut(s) 493, 1143
AspS9I GGNCC 3 cut(s) 310, 733, 2041
AsuC2I CCSGG 2 cut(s) 248, 313
AsuHPI GGTGA 7 cut(s) 17, 23, 460, 1036, 1715, 2008, 2072
AsuII TTCGAA 1 cut(s) 1563
AvaII GGWCC 2 cut(s) 733, 2041
AxyI CCTNAGG 1 cut(s) 2076
BaeGI GKGCMC 3 cut(s) 1804, 1896, 2073
BalI TGGCCA 2 cut(s) 162, 563
BanI GGYRCC 1 cut(s) 1891
BanII GRGCYC 1 cut(s) 748
BauI CACGAG 1 cut(s) 898
BbrPI CACGTG 1 cut(s) 158
BbsI GAAGAC 2 cut(s) 313, 2041
Bbv12I GWGCWC 4 cut(s) 748, 1350, 1804, 2073
BccI CCATC 6 cut(s) 128, 734, 755, 760, 1271, 1898
BceAI ACGGC 4 cut(s) 395, 415, 601, 1932
BciT130I CCWGG 4 cut(s) 881, 1701, 1797, 2010
BcnI CCSGG 2 cut(s) 248, 313
BcoDI GTCTC 3 cut(s) 280, 342, 2349
BfaI CTAG 4 cut(s) 110, 272, 1823, 2102
BfmI CTRYAG 2 cut(s) 71, 648
BfoI RGCGCY 1 cut(s) 494
BglII AGATCT 2 cut(s) 971, 1093
BlpI GCTNAGC 1 cut(s) 338
Bme1390I CCNGG 6 cut(s) 248, 313, 881, 1701, 1797, 2010
Bme18I GGWCC 2 cut(s) 733, 2041
BmgT120I GGNCC 3 cut(s) 310, 733, 2041
BmiI GGNNCC 3 cut(s) 1893, 1909, 2257
BmrFI CCNGG 6 cut(s) 248, 313, 881, 1701, 1797, 2010
BmsI GCATC 2 cut(s) 826, 1444
BoxI GACNNNNGTC 1 cut(s) 272
BpiI GAAGAC 2 cut(s) 313, 2041
BpmI CTGGAG 2 cut(s) 570, 1329
Bpu10I CCTNAGC 1 cut(s) 1965
Bpu1102I GCTNAGC 1 cut(s) 338
Bpu14I TTCGAA 1 cut(s) 1563
BpuMI CCSGG 2 cut(s) 248, 313
BsaAI YACGTR 2 cut(s) 158, 894
BsaHI GRCGYC 7 cut(s) 186, 291, 300, 629, 1354, 1657, 2358
BsaJI CCNNGG 3 cut(s) 633, 1699, 1764
BsaXI ACNNNNNCTCC 2 cut(s) 1344, 1374
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 294, 1500, 1747
Bse1I ACTGG 2 cut(s) 718, 2414
Bse21I CCTNAGG 1 cut(s) 2076
Bse3DI GCAATG 3 cut(s) 409, 521, 554
BseBI CCWGG 4 cut(s) 881, 1701, 1797, 2010
BseDI CCNNGG 3 cut(s) 633, 1699, 1764
BseGI GGATG 5 cut(s) 120, 771, 775, 889, 1238
BseLI CCNNNNNNNGG 4 cut(s) 40, 294, 1500, 1747
BseMI GCAATG 3 cut(s) 409, 521, 554
BseMII CTCAG 5 cut(s) 352, 470, 1635, 2067, 2169
BseNI ACTGG 2 cut(s) 718, 2414
BseRI GAGGAG 2 cut(s) 518, 521
BseSI GKGCMC 3 cut(s) 1804, 1896, 2073
BseYI CCCAGC 2 cut(s) 66, 1896
BsgI GTGCAG 1 cut(s) 1155
BshFI GGCC 5 cut(s) 162, 311, 563, 1763, 1947
BshNI GGYRCC 1 cut(s) 1891
BsiHKAI GWGCWC 4 cut(s) 748, 1350, 1804, 2073
BsiSI CCGG 6 cut(s) 144, 248, 288, 313, 1178, 1834
BslFI GGGAC 2 cut(s) 311, 410
BslI CCNNNNNNNGG 4 cut(s) 40, 294, 1500, 1747
BsmAI GTCTC 3 cut(s) 280, 342, 2349
BsmBI CGTCTC 1 cut(s) 2349
BsmFI GGGAC 2 cut(s) 311, 410
BsmI GAATGC 5 cut(s) 799, 1114, 1143, 1510, 2396
BsnI GGCC 5 cut(s) 162, 311, 563, 1763, 1947
Bsp119I TTCGAA 1 cut(s) 1563
Bsp1286I GDGCHC 5 cut(s) 748, 1350, 1804, 1896, 2073
Bsp1407I TGTACA 1 cut(s) 2091
Bsp143I GATC 8 cut(s) 135, 180, 372, 971, 1093, 1512, 1708, 1742
Bsp1720I GCTNAGC 1 cut(s) 338
BspACI CCGC 7 cut(s) 47, 63, 335, 408, 441, 1044, 1869
BspANI GGCC 5 cut(s) 162, 311, 563, 1763, 1947
BspCNI CTCAG 5 cut(s) 351, 471, 1634, 2068, 2170
BspHI TCATGA 1 cut(s) 832
BspLI GGNNCC 3 cut(s) 1893, 1909, 2257
BspMAI CTGCAG 2 cut(s) 75, 652
BspT104I TTCGAA 1 cut(s) 1563
BspT107I GGYRCC 1 cut(s) 1891
BsrBI CCGCTC 1 cut(s) 337
BsrDI GCAATG 3 cut(s) 409, 521, 554
BsrGI TGTACA 1 cut(s) 2091
BsrI ACTGG 2 cut(s) 718, 2414
BssECI CCNNGG 3 cut(s) 633, 1699, 1764
BssMI GATC 8 cut(s) 135, 180, 372, 971, 1093, 1512, 1708, 1742
BssNI GRCGYC 7 cut(s) 186, 291, 300, 629, 1354, 1657, 2358
BssSI CACGAG 1 cut(s) 898
BssT1I CCWWGG 1 cut(s) 1764
Bst2BI CACGAG 1 cut(s) 898
Bst2UI CCWGG 4 cut(s) 881, 1701, 1797, 2010
Bst4CI ACNGT 8 cut(s) 43, 56, 176, 355, 824, 1204, 2068, 2210
BstACI GRCGYC 7 cut(s) 186, 291, 300, 629, 1354, 1657, 2358
BstAUI TGTACA 1 cut(s) 2091
BstBAI YACGTR 2 cut(s) 158, 894
BstBI TTCGAA 1 cut(s) 1563
BstC8I GCNNGC 8 cut(s) 309, 379, 476, 521, 561, 957, 1358, 2220
BstDEI CTNAG 8 cut(s) 338, 479, 968, 1621, 1965, 2076, 2178, 2282
BstF5I GGATG 5 cut(s) 120, 771, 775, 889, 1238
BstH2I RGCGCY 1 cut(s) 494
BstHHI GCGC 2 cut(s) 493, 1143
BstKTI GATC 8 cut(s) 138, 183, 375, 974, 1096, 1515, 1711, 1745
BstMAI GTCTC 3 cut(s) 280, 342, 2349
BstMBI GATC 8 cut(s) 135, 180, 372, 971, 1093, 1512, 1708, 1742
BstNI CCWGG 4 cut(s) 881, 1701, 1797, 2010
BstNSI RCATGY 1 cut(s) 959
BstPAI GACNNNNGTC 1 cut(s) 272
BstSCI CCNGG 6 cut(s) 246, 311, 879, 1699, 1795, 2008
BstSFI CTRYAG 2 cut(s) 71, 648
BstSLI GKGCMC 3 cut(s) 1804, 1896, 2073
BstSNI TACGTA 1 cut(s) 894
BstV2I GAAGAC 2 cut(s) 313, 2041
BstX2I RGATCY 2 cut(s) 971, 1093
BstXI CCANNNNNNTGG 2 cut(s) 158, 1904
BstYI RGATCY 2 cut(s) 971, 1093
Bsu36I CCTNAGG 1 cut(s) 2076
BsuRI GGCC 5 cut(s) 162, 311, 563, 1763, 1947
BtsCI GGATG 5 cut(s) 120, 771, 775, 889, 1238
BtsIMutI CAGTG 4 cut(s) 331, 351, 916, 2215
Cac8I GCNNGC 8 cut(s) 309, 379, 476, 521, 561, 957, 1358, 2220
CciI TCATGA 1 cut(s) 832
CfoI GCGC 2 cut(s) 493, 1143
Cfr13I GGNCC 3 cut(s) 310, 733, 2041
CseI GACGC 5 cut(s) 280, 618, 1362, 1665, 2366
CsiI ACCWGGT 2 cut(s) 1795, 2008
Csp6I GTAC 4 cut(s) 895, 1916, 2081, 2092
CspCI CAANNNNNGTGG 2 cut(s) 770, 805
CviQI GTAC 4 cut(s) 895, 1916, 2081, 2092
DdeI CTNAG 8 cut(s) 338, 479, 968, 1621, 1965, 2076, 2178, 2282
DpnI GATC 8 cut(s) 137, 182, 374, 973, 1095, 1514, 1710, 1744
DpnII GATC 8 cut(s) 135, 180, 372, 971, 1093, 1512, 1708, 1742
DraI TTTAAA 1 cut(s) 1285
EaeI YGGCCR 2 cut(s) 160, 561
Ecl136II GAGCTC 1 cut(s) 746
Eco105I TACGTA 1 cut(s) 894
Eco130I CCWWGG 1 cut(s) 1764
Eco24I GRGCYC 1 cut(s) 748
Eco47I GGWCC 2 cut(s) 733, 2041
Eco53kI GAGCTC 1 cut(s) 746
Eco57I CTGAAG 2 cut(s) 307, 996
Eco72I CACGTG 1 cut(s) 158
Eco81I CCTNAGG 1 cut(s) 2076
EcoICRI GAGCTC 1 cut(s) 746
EcoO109I RGGNCCY 1 cut(s) 733
EcoRI GAATTC 1 cut(s) 2191
EcoRII CCWGG 4 cut(s) 879, 1699, 1795, 2008
EcoT14I CCWWGG 1 cut(s) 1764
EcoT22I ATGCAT 5 cut(s) 864, 1021, 1303, 1680, 2311
EcoT38I GRGCYC 1 cut(s) 748
ErhI CCWWGG 1 cut(s) 1764
Esp3I CGTCTC 1 cut(s) 2349
FaqI GGGAC 2 cut(s) 311, 410
FblI GTMKAC 2 cut(s) 189, 2201
FokI GGATG 5 cut(s) 107, 778, 782, 896, 1245
FriOI GRGCYC 1 cut(s) 748
FspBI CTAG 4 cut(s) 110, 272, 1823, 2102
GlaI GCGC 2 cut(s) 492, 1142
GsaI CCCAGC 2 cut(s) 70, 1900
GsuI CTGGAG 2 cut(s) 570, 1329
HaeII RGCGCY 1 cut(s) 494
HaeIII GGCC 5 cut(s) 162, 311, 563, 1763, 1947
HapII CCGG 6 cut(s) 144, 248, 288, 313, 1178, 1834
HgaI GACGC 5 cut(s) 280, 618, 1362, 1665, 2366
HhaI GCGC 2 cut(s) 493, 1143
Hin1I GRCGYC 7 cut(s) 186, 291, 300, 629, 1354, 1657, 2358
Hin6I GCGC 2 cut(s) 491, 1141
HinP1I GCGC 2 cut(s) 491, 1141
HincII GTYRAC 1 cut(s) 1755
HindII GTYRAC 1 cut(s) 1755
HindIII AAGCTT 2 cut(s) 2216, 2243
HpaII CCGG 6 cut(s) 144, 248, 288, 313, 1178, 1834
HphI GGTGA 7 cut(s) 17, 23, 460, 1036, 1715, 2008, 2072
Hpy188I TCNGA 5 cut(s) 976, 1091, 1409, 2179, 2267
Hpy188III TCNNGA 9 cut(s) 425, 549, 833, 992, 1148, 2102, 2144, 2325, 2350
Hpy99I CGWCG 4 cut(s) 188, 260, 296, 706
HpyAV CCTTC 3 cut(s) 475, 652, 1646
HpyCH4III ACNGT 8 cut(s) 43, 56, 176, 355, 824, 1204, 2068, 2210
HpyCH4IV ACGT 6 cut(s) 157, 186, 300, 893, 1196, 1319
HpyF3I CTNAG 8 cut(s) 338, 479, 968, 1621, 1965, 2076, 2178, 2282
HpySE526I ACGT 6 cut(s) 157, 186, 300, 893, 1196, 1319
Hsp92I GRCGYC 7 cut(s) 186, 291, 300, 629, 1354, 1657, 2358
HspAI GCGC 2 cut(s) 491, 1141
Kzo9I GATC 8 cut(s) 135, 180, 372, 971, 1093, 1512, 1708, 1742
LmnI GCTCC 7 cut(s) 551, 743, 1310, 1345, 1365, 1987, 2255
LweI GCATC 2 cut(s) 826, 1444
MabI ACCWGGT 2 cut(s) 1795, 2008
MaeI CTAG 4 cut(s) 110, 272, 1823, 2102
MaeII ACGT 6 cut(s) 157, 186, 300, 893, 1196, 1319
MaeIII GTNAC 4 cut(s) 56, 301, 425, 1024
MalI GATC 8 cut(s) 137, 182, 374, 973, 1095, 1514, 1710, 1744
MbiI CCGCTC 1 cut(s) 337
MboI GATC 8 cut(s) 135, 180, 372, 971, 1093, 1512, 1708, 1742
MboII GAAGA 9 cut(s) 192, 200, 313, 603, 1253, 1592, 1718, 2011, 2041
MfeI CAATTG 1 cut(s) 537
MflI RGATCY 2 cut(s) 971, 1093
MhlI GDGCHC 5 cut(s) 748, 1350, 1804, 1896, 2073
MlsI TGGCCA 2 cut(s) 162, 563
MluCI AATT 9 cut(s) 237, 537, 776, 845, 1050, 1411, 1692, 2191, 2404
MluNI TGGCCA 2 cut(s) 162, 563
MlyI GAGTC 7 cut(s) 262, 327, 982, 1676, 1831, 1872, 2183
MmeI TCCRAC 3 cut(s) 1387, 1554, 2000
Mox20I TGGCCA 2 cut(s) 162, 563
Mph1103I ATGCAT 5 cut(s) 864, 1021, 1303, 1680, 2311
MscI TGGCCA 2 cut(s) 162, 563
MslI CAYNNNNRTG 5 cut(s) 156, 473, 569, 1536, 1807
Msp20I TGGCCA 2 cut(s) 162, 563
MspA1I CMGCKG 4 cut(s) 70, 526, 754, 952
MspI CCGG 6 cut(s) 144, 248, 288, 313, 1178, 1834
MspR9I CCNGG 6 cut(s) 248, 313, 881, 1701, 1797, 2010
MunI CAATTG 1 cut(s) 537
Mva1269I GAATGC 5 cut(s) 799, 1114, 1143, 1510, 2396
MvaI CCWGG 4 cut(s) 881, 1701, 1797, 2010
NciI CCSGG 2 cut(s) 248, 313
NdeII GATC 8 cut(s) 135, 180, 372, 971, 1093, 1512, 1708, 1742
NlaIV GGNNCC 3 cut(s) 1893, 1909, 2257
NmeAIII GCCGAG 2 cut(s) 257, 727
NmuCI GTSAC 3 cut(s) 301, 425, 1024
NsiI ATGCAT 5 cut(s) 864, 1021, 1303, 1680, 2311
NspI RCATGY 1 cut(s) 959
NspV TTCGAA 1 cut(s) 1563
OliI CACNNNNGTG 3 cut(s) 156, 473, 569
PaeI GCATGC 1 cut(s) 959
PagI TCATGA 1 cut(s) 832
PcsI WCGNNNNNNNCGW 2 cut(s) 701, 1430
PctI GAATGC 5 cut(s) 799, 1114, 1143, 1510, 2396
PfeI GAWTC 4 cut(s) 874, 1391, 1490, 2278
PflFI GACNNNGTC 1 cut(s) 254
PleI GAGTC 7 cut(s) 262, 326, 982, 1676, 1831, 1872, 2182
PmaCI CACGTG 1 cut(s) 158
PmlI CACGTG 1 cut(s) 158
PpsI GAGTC 7 cut(s) 262, 326, 982, 1676, 1831, 1872, 2182
Ppu21I YACGTR 2 cut(s) 158, 894
PpuMI RGGWCCY 1 cut(s) 733
PshAI GACNNNNGTC 1 cut(s) 272
Psp124BI GAGCTC 1 cut(s) 748
Psp5II RGGWCCY 1 cut(s) 733
Psp6I CCWGG 4 cut(s) 879, 1699, 1795, 2008
PspCI CACGTG 1 cut(s) 158
PspFI CCCAGC 2 cut(s) 66, 1896
PspGI CCWGG 4 cut(s) 879, 1699, 1795, 2008
PspN4I GGNNCC 3 cut(s) 1893, 1909, 2257
PspPI GGNCC 3 cut(s) 310, 733, 2041
PspPPI RGGWCCY 1 cut(s) 733
PstI CTGCAG 2 cut(s) 75, 652
PsuI RGATCY 2 cut(s) 971, 1093
PsyI GACNNNGTC 1 cut(s) 254
PvuII CAGCTG 4 cut(s) 70, 526, 754, 952
RsaI GTAC 4 cut(s) 896, 1917, 2082, 2093
RsaNI GTAC 4 cut(s) 895, 1916, 2081, 2092
RseI CAYNNNNRTG 5 cut(s) 156, 473, 569, 1536, 1807
SacI GAGCTC 1 cut(s) 748
Sau3AI GATC 8 cut(s) 135, 180, 372, 971, 1093, 1512, 1708, 1742
Sau96I GGNCC 3 cut(s) 310, 733, 2041
SchI GAGTC 7 cut(s) 262, 327, 982, 1676, 1831, 1872, 2183
ScrFI CCNGG 6 cut(s) 248, 313, 881, 1701, 1797, 2010
SduI GDGCHC 5 cut(s) 748, 1350, 1804, 1896, 2073
SexAI ACCWGGT 2 cut(s) 1795, 2008
SfaNI GCATC 2 cut(s) 826, 1444
SfcI CTRYAG 2 cut(s) 71, 648
SfuI TTCGAA 1 cut(s) 1563
SinI GGWCC 2 cut(s) 733, 2041
SmiMI CAYNNNNRTG 5 cut(s) 156, 473, 569, 1536, 1807
SnaBI TACGTA 1 cut(s) 894
SphI GCATGC 1 cut(s) 959
Sse9I AATT 9 cut(s) 237, 537, 776, 845, 1050, 1411, 1692, 2191, 2404
SsiI CCGC 7 cut(s) 47, 63, 335, 408, 441, 1044, 1869
SspMI CTAG 4 cut(s) 110, 272, 1823, 2102
SstI GAGCTC 1 cut(s) 748
StyD4I CCNGG 6 cut(s) 246, 311, 879, 1699, 1795, 2008
StyI CCWWGG 1 cut(s) 1764
TaaI ACNGT 8 cut(s) 43, 56, 176, 355, 824, 1204, 2068, 2210
TaiI ACGT 6 cut(s) 160, 189, 303, 896, 1199, 1322
TaqI TCGA 3 cut(s) 183, 231, 1563
TasI AATT 9 cut(s) 237, 537, 776, 845, 1050, 1411, 1692, 2191, 2404
TatI WGTACW 2 cut(s) 1915, 2091
TauI GCSGC 4 cut(s) 50, 65, 410, 1871
TfiI GAWTC 4 cut(s) 874, 1391, 1490, 2278
TscAI CASTG 4 cut(s) 331, 358, 916, 2215
TseFI GTSAC 3 cut(s) 301, 425, 1024
Tsp45I GTSAC 3 cut(s) 301, 425, 1024
TspDTI ATGAA 7 cut(s) 684, 786, 849, 1071, 1265, 2255, 2360
TspGWI ACGGA 2 cut(s) 1365, 1483
TspRI CASTG 4 cut(s) 331, 358, 916, 2215
Tth111I GACNNNGTC 1 cut(s) 254
VneI GTGCAC 2 cut(s) 1800, 2069
VpaK11BI GGWCC 2 cut(s) 733, 2041
XapI RAATTY 3 cut(s) 237, 1411, 2191
XbaI TCTAGA 1 cut(s) 2101
XceI RCATGY 1 cut(s) 959
XmiI GTMKAC 2 cut(s) 189, 2201
XspI CTAG 4 cut(s) 110, 272, 1823, 2102
ZraI GACGTC 2 cut(s) 187, 301
Zsp2I ATGCAT 5 cut(s) 864, 1021, 1303, 1680, 2311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.