Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005913.1

Orthogroup ID

OG0004093

Physical Location & Seq

Genomic Coordinates Forward (+)

8701 .. 11247

Gene Structure 2547 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

atggagttggggttggcggtgaggtcgaggcaggagatgagggacttgagggaggggtcgcggtcgatgaaggcggggagaaggagaggagaggatatcggtggggttagtgatggtttgggtggtggagaaggagaggagagagaggagctatgctgcctccaacgccccacctcatactctttagcccgaaccatccacgcccacatgatcacttccggcttccacccacgtggccatatcctcaatcgtttgatcgacgtctaccgcaaatcttcaaatcttcgctacgcactccacctgttcgaccaaattcccaacccggacatcgtcgccagaaaaactctggtttcggcgtattccggcgtcgggggcgtcacgctggcccggagagtgttcagtgaaactccgtccagcatgagagacactgtcagctacaatgccatgatcgcaggctactctcataatagggacggcaatgctgccgttgagctgtttcgagaaatgatgcgaggcggttttcggcccgatgagtttaccttcaccagtgtgctgagtggtctggcgcttatagtggaggaggagaagcaatgccagcagctgcattgtgcaattgttaagtctggagcattgttggccactttggtgtcgaatgcgttggtgtctgtgtatgttaagtgtgcttcttcaccgttggtgtcttcgtcgtcggtggtggtgcctgcggcgaggaaggtgtttgatgaaatgcctacgagagatgagctgtcgtggacgacgatgattactggttatgtgaggaatgaggaccttgatggagctcggcagttgctagatggaatggatgaaaaattggaagtggcgtggaatgcaatgatttcgggttatgtgcatcatagtttttgtcatgaggcattgaaattgttcagggaaatgcatttaatggggattcgacaggatgagtttacatacacgagtgttatcagtgcttgtgctaacaatgacttatttaagcatgggaagcagctgcatgcttacatactaagatctgaagcaaaaccgactgtggacttttctttatctgtgaataatgcattggttacactatactttaggtgcggtaaaattgatgaagcacgatatatttttaataatatgtccgtcagagatcttgtttcttggaatgcaatattgtcagggtatgtgagtggagggcgcatccaggaagcaaaatccttttttgaggaaatgccggaaaggagtggtctaacttggactgtaataatatcaggtttagctcaaaatggatgtggggaagaagctatgaagctatttaaccaaatgagactcgatggttttaaaccctgtgattatgcatttgctggagctattacgtcttgtgctgctctgggggcgttggagcatggacgccagctccgtgctcaactaatatgcttggggcatgattcaagcctttcagttggaaattcacttatcacaatgtatgccagatgtggggttgtagacgatgctgactgtgtgttcctcacaatgccttatattgattccgtgtcgtggaatgctatgatcgcagccctggcacaacatggatatggtgtccaagcaattagacttttcaaacagatgttgggggaagatataatgccagatagaataactttcctcactattccgtcagcttgtagtcatgctggtttagttaaagaaggacgccaatattttcgtttaatgcatgactcttatggtattgcccctggtgaagaccattatgcccgtatgattgatttgttgtgccgatctggggagttgacagaggccaaggacttaatcaaatcaatgccttttgaaccaggtgcaccaatttgggaggctattctagctggttgctggactcatgggaatatggatttaggtattcaagctgcagaacgactctttgagctggtgccccagcatgatggaacctatgtacttttgtcaaacttgtatgctgctttaggccgttgggataatgtggctaaggtgcgaaaactaatgagggagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

688

Amino Acids

76.37

Weight (kDa)

6.26

Isoelectric Point (pI)

38.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	141 - 189	3.6e-15	PPR repeat family
PPR	PF01535	144 - 174	2.9e-07	PPR repeat
PPR_2	PF13041	287 - 333	1.9e-11	PPR repeat family
PPR	PF01535	287 - 317	6.5e-08	PPR repeat
PPR_2	PF13041	390 - 420	9.9e-06	PPR repeat family
PPR	PF01535	392 - 420	1.4e-06	PPR repeat
PPR_2	PF13041	424 - 467	4.4e-07	PPR repeat family
PPR	PF01535	424 - 453	7.3e-08	PPR repeat
PPR_2	PF13041	522 - 568	2e-08	PPR repeat family
PPR	PF01535	524 - 553	7.4e-06	PPR repeat
E_motif	PF20431	639 - 687	2.7e-13	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004093)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25360
fragaria_vesca	FvH4_5g32410 FvH4_6g08990
malus_domestica	MD17G1265000.v1.1
prunus_persica	Prupe.3G114900_v2.0.a1 Prupe.3G115100_v2.0.a1
pyrus_communis	pycom17g26470
rosa_chinensis	RchiOBHm_Chr7g0221631 RchiOBHm_Chr7g0228891 RchiOBHm_Chr7g0228961
rosa_laevigata	RLG00000001538 RLG00000002149
rosa_multiflora	Rmu_sc0005016.1_g000036 Rmu_sc0005913.1_g000007 Rmu_sc0005913.1_g000028 Rmu_sc0027650.1_g000001
rosa_roxburghii	Rroxscaffold_3G00230820 Rroxscaffold_3G00238170
rosa_rugosa	Rorug07G0202700 Rorug07G0202700 Rorug07G0252700 Rorug07G0254200
rosa_samantha	Rh7AG343100 Rh7AG405900 Rh7BG333100 Rh7BG385400 Rh7CG360700 Rh7CG423700 Rh7DG341100
rosa_wichuraiana	Rw0G004030 Rw7G029100 Rw7G033660 Rw7G033680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	264
AccB1I	GGYRCC	2 cut(s)	718, 1966
AccI	GTMKAC	2 cut(s)	264, 1524
AccII	CGCG	1 cut(s)	61
AciI	CCGC	7 cut(s)	17, 61, 74, 268, 516, 725, 1119
AcoI	YGGCCR	2 cut(s)	235, 636
AcsI	RAATTY	2 cut(s)	312, 1486
AcuI	CTGAAG	1 cut(s)	1071
AcvI	CACGTG	1 cut(s)	233
AcyI	GRCGYC	5 cut(s)	261, 366, 375, 1429, 1732
AfaI	GTAC	1 cut(s)	1992
AfiI	CCNNNNNNNGG	4 cut(s)	369, 1515, 1575, 1822
AgsI	TTSAA	6 cut(s)	279, 919, 1470, 1639, 1868, 1940
AjnI	CCWGG	4 cut(s)	1221, 1596, 1774, 1870
AjuI	GAANNNNNNNTTGG	2 cut(s)	1079, 1111
AleI	CACNNNNGTG	3 cut(s)	231, 548, 644
Alw21I	GWGCWC	3 cut(s)	823, 1444, 1879
Alw26I	GTCTC	2 cut(s)	417, 1339
Alw44I	GTGCAC	1 cut(s)	1875
AlwNI	CAGNNNCTG	1 cut(s)	601
AoxI	GGCC	6 cut(s)	235, 384, 524, 636, 1836, 2020
ApaLI	GTGCAC	1 cut(s)	1875
ApoI	RAATTY	2 cut(s)	312, 1486
Asp700I	GAANNNNTTC	1 cut(s)	923
AspLEI	GCGC	2 cut(s)	568, 1218
AspS9I	GGNCC	3 cut(s)	385, 525, 808
AsuC2I	CCSGG	2 cut(s)	323, 388
AsuHPI	GGTGA	4 cut(s)	31, 535, 681, 1790
AvaII	GGWCC	1 cut(s)	808
BaeGI	GKGCMC	2 cut(s)	1879, 1971
BalI	TGGCCA	2 cut(s)	237, 638
BanI	GGYRCC	2 cut(s)	718, 1966
BanII	GRGCYC	1 cut(s)	823
BauI	CACGAG	1 cut(s)	973
BbrPI	CACGTG	1 cut(s)	233
BbsI	GAAGAC	2 cut(s)	693, 1788
Bbv12I	GWGCWC	3 cut(s)	823, 1444, 1879
BccI	CCATC	6 cut(s)	107, 203, 809, 830, 1346, 1973
BceAI	ACGGC	3 cut(s)	470, 490, 2007
BcgI	CGANNNNNNTGC	2 cut(s)	861, 895
BciT130I	CCWGG	4 cut(s)	1223, 1598, 1776, 1872
BclI	TGATCA	1 cut(s)	210
BcnI	CCSGG	2 cut(s)	323, 388
BcoDI	GTCTC	2 cut(s)	417, 1339
BfaI	CTAG	2 cut(s)	833, 1898
BfmI	CTRYAG	1 cut(s)	1944
BfoI	RGCGCY	1 cut(s)	569
BglII	AGATCT	2 cut(s)	1046, 1168
Bme1390I	CCNGG	6 cut(s)	323, 388, 1223, 1598, 1776, 1872
Bme18I	GGWCC	1 cut(s)	808
BmgT120I	GGNCC	3 cut(s)	385, 525, 808
BmiI	GGNNCC	3 cut(s)	720, 1968, 1984
BmrFI	CCNGG	6 cut(s)	323, 388, 1223, 1598, 1776, 1872
BmsI	GCATC	4 cut(s)	498, 901, 1227, 1519
BpiI	GAAGAC	2 cut(s)	693, 1788
BpmI	CTGGAG	2 cut(s)	645, 1404
Bpu10I	CCTNAGC	1 cut(s)	2040
BpuEI	CTTGAG	1 cut(s)	67
BpuMI	CCSGG	2 cut(s)	323, 388
BsaAI	YACGTR	1 cut(s)	233
BsaHI	GRCGYC	5 cut(s)	261, 366, 375, 1429, 1732
BsaJI	CCNNGG	3 cut(s)	1596, 1774, 1839
BsaXI	ACNNNNNCTCC	3 cut(s)	26, 1419, 1449
Bsc4I	CCNNNNNNNGG	4 cut(s)	369, 1515, 1575, 1822
Bse1I	ACTGG	2 cut(s)	546, 793
Bse3DI	GCAATG	3 cut(s)	484, 596, 879
BseBI	CCWGG	4 cut(s)	1223, 1598, 1776, 1872
BseDI	CCNNGG	3 cut(s)	1596, 1774, 1839
BseGI	GGATG	5 cut(s)	195, 850, 964, 1218, 1313
BseLI	CCNNNNNNNGG	4 cut(s)	369, 1515, 1575, 1822
BseMI	GCAATG	3 cut(s)	484, 596, 879
BseMII	CTCAG	1 cut(s)	545
BseNI	ACTGG	2 cut(s)	546, 793
BseRI	GAGGAG	5 cut(s)	102, 152, 161, 593, 596
BseSI	GKGCMC	2 cut(s)	1879, 1971
BseYI	CCCAGC	1 cut(s)	1971
Bsh1236I	CGCG	1 cut(s)	61
Bsh1285I	CGRYCG	1 cut(s)	65
BshFI	GGCC	6 cut(s)	237, 386, 526, 638, 1838, 2022
BshNI	GGYRCC	2 cut(s)	718, 1966
BsiEI	CGRYCG	1 cut(s)	65
BsiHKAI	GWGCWC	3 cut(s)	823, 1444, 1879
BsiSI	CCGG	5 cut(s)	219, 323, 363, 388, 1253
BslFI	GGGAC	2 cut(s)	56, 485
BslI	CCNNNNNNNGG	4 cut(s)	369, 1515, 1575, 1822
BsmAI	GTCTC	2 cut(s)	417, 1339
BsmFI	GGGAC	2 cut(s)	56, 485
BsmI	GAATGC	4 cut(s)	658, 874, 1189, 1585
BsnI	GGCC	6 cut(s)	237, 386, 526, 638, 1838, 2022
Bsp1286I	GDGCHC	4 cut(s)	823, 1444, 1879, 1971
Bsp143I	GATC	7 cut(s)	210, 255, 447, 1046, 1168, 1587, 1817
BspACI	CCGC	7 cut(s)	17, 61, 74, 268, 516, 725, 1119
BspANI	GGCC	6 cut(s)	237, 386, 526, 638, 1838, 2022
BspCNI	CTCAG	1 cut(s)	546
BspFNI	CGCG	1 cut(s)	61
BspHI	TCATGA	1 cut(s)	907
BspLI	GGNNCC	3 cut(s)	720, 1968, 1984
BspMAI	CTGCAG	1 cut(s)	1948
BspT107I	GGYRCC	2 cut(s)	718, 1966
BsrDI	GCAATG	3 cut(s)	484, 596, 879
BsrI	ACTGG	2 cut(s)	546, 793
BssECI	CCNNGG	3 cut(s)	1596, 1774, 1839
BssMI	GATC	7 cut(s)	210, 255, 447, 1046, 1168, 1587, 1817
BssNI	GRCGYC	5 cut(s)	261, 366, 375, 1429, 1732
BssSI	CACGAG	1 cut(s)	973
BssT1I	CCWWGG	1 cut(s)	1839
Bst2BI	CACGAG	1 cut(s)	973
Bst2UI	CCWGG	4 cut(s)	1223, 1598, 1776, 1872
Bst4CI	ACNGT	5 cut(s)	430, 693, 1066, 1279, 1538
BstACI	GRCGYC	5 cut(s)	261, 366, 375, 1429, 1732
BstBAI	YACGTR	1 cut(s)	233
BstC8I	GCNNGC	6 cut(s)	384, 454, 596, 723, 1032, 1433
BstDEI	CTNAG	3 cut(s)	554, 1043, 2040
BstF5I	GGATG	5 cut(s)	195, 850, 964, 1218, 1313
BstFNI	CGCG	1 cut(s)	61
BstH2I	RGCGCY	1 cut(s)	569
BstHHI	GCGC	2 cut(s)	568, 1218
BstKTI	GATC	7 cut(s)	213, 258, 450, 1049, 1171, 1590, 1820
BstMAI	GTCTC	2 cut(s)	417, 1339
BstMBI	GATC	7 cut(s)	210, 255, 447, 1046, 1168, 1587, 1817
BstMCI	CGRYCG	1 cut(s)	65
BstNI	CCWGG	4 cut(s)	1223, 1598, 1776, 1872
BstNSI	RCATGY	1 cut(s)	1034
BstSCI	CCNGG	6 cut(s)	321, 386, 1221, 1596, 1774, 1870
BstSFI	CTRYAG	1 cut(s)	1944
BstSLI	GKGCMC	2 cut(s)	1879, 1971
BstUI	CGCG	1 cut(s)	61
BstV2I	GAAGAC	2 cut(s)	693, 1788
BstX2I	RGATCY	2 cut(s)	1046, 1168
BstXI	CCANNNNNNTGG	2 cut(s)	233, 1979
BstYI	RGATCY	2 cut(s)	1046, 1168
BsuRI	GGCC	6 cut(s)	237, 386, 526, 638, 1838, 2022
BtsCI	GGATG	5 cut(s)	195, 850, 964, 1218, 1313
BtsIMutI	CAGTG	4 cut(s)	406, 426, 553, 991
Cac8I	GCNNGC	6 cut(s)	384, 454, 596, 723, 1032, 1433
CaiI	CAGNNNCTG	1 cut(s)	601
CciI	TCATGA	1 cut(s)	907
CfoI	GCGC	2 cut(s)	568, 1218
Cfr13I	GGNCC	3 cut(s)	385, 525, 808
CseI	GACGC	4 cut(s)	355, 364, 1437, 1740
CsiI	ACCWGGT	1 cut(s)	1870
Csp6I	GTAC	1 cut(s)	1991
CviQI	GTAC	1 cut(s)	1991
DdeI	CTNAG	3 cut(s)	554, 1043, 2040
DpnI	GATC	7 cut(s)	212, 257, 449, 1048, 1170, 1589, 1819
DpnII	GATC	7 cut(s)	210, 255, 447, 1046, 1168, 1587, 1817
DraI	TTTAAA	1 cut(s)	1360
EaeI	YGGCCR	2 cut(s)	235, 636
Ecl136II	GAGCTC	1 cut(s)	821
Eco130I	CCWWGG	1 cut(s)	1839
Eco24I	GRGCYC	1 cut(s)	823
Eco32I	GATATC	1 cut(s)	97
Eco47I	GGWCC	1 cut(s)	808
Eco53kI	GAGCTC	1 cut(s)	821
Eco57I	CTGAAG	1 cut(s)	1071
Eco72I	CACGTG	1 cut(s)	233
EcoICRI	GAGCTC	1 cut(s)	821
EcoO109I	RGGNCCY	1 cut(s)	808
EcoRII	CCWGG	4 cut(s)	1221, 1596, 1774, 1870
EcoRV	GATATC	1 cut(s)	97
EcoT14I	CCWWGG	1 cut(s)	1839
EcoT22I	ATGCAT	4 cut(s)	939, 1096, 1378, 1755
EcoT38I	GRGCYC	1 cut(s)	823
ErhI	CCWWGG	1 cut(s)	1839
FaqI	GGGAC	2 cut(s)	56, 485
FauI	CCCGC	1 cut(s)	67
FbaI	TGATCA	1 cut(s)	210
FblI	GTMKAC	2 cut(s)	264, 1524
FokI	GGATG	5 cut(s)	182, 857, 971, 1205, 1320
FriOI	GRGCYC	1 cut(s)	823
FspBI	CTAG	2 cut(s)	833, 1898
GlaI	GCGC	2 cut(s)	567, 1217
GsaI	CCCAGC	1 cut(s)	1975
GsuI	CTGGAG	2 cut(s)	645, 1404
HaeII	RGCGCY	1 cut(s)	569
HaeIII	GGCC	6 cut(s)	237, 386, 526, 638, 1838, 2022
HapII	CCGG	5 cut(s)	219, 323, 363, 388, 1253
HgaI	GACGC	4 cut(s)	355, 364, 1437, 1740
HhaI	GCGC	2 cut(s)	568, 1218
Hin1I	GRCGYC	5 cut(s)	261, 366, 375, 1429, 1732
Hin6I	GCGC	2 cut(s)	566, 1216
HinP1I	GCGC	2 cut(s)	566, 1216
HincII	GTYRAC	1 cut(s)	1830
HindII	GTYRAC	1 cut(s)	1830
HinfI	GANTC	7 cut(s)	949, 1347, 1466, 1565, 1757, 1912, 1953
HpaII	CCGG	5 cut(s)	219, 323, 363, 388, 1253
HphI	GGTGA	4 cut(s)	31, 535, 681, 1790
Hpy166II	GTNNAC	8 cut(s)	265, 537, 774, 966, 1069, 1525, 1830, 1877
Hpy188I	TCNGA	2 cut(s)	1051, 1166
Hpy188III	TCNNGA	3 cut(s)	500, 624, 908
Hpy8I	GTNNAC	8 cut(s)	265, 537, 774, 966, 1069, 1525, 1830, 1877
Hpy99I	CGWCG	6 cut(s)	263, 335, 371, 709, 712, 781
HpyAV	CCTTC	6 cut(s)	64, 75, 125, 550, 727, 1721
HpyCH4III	ACNGT	5 cut(s)	430, 693, 1066, 1279, 1538
HpyCH4IV	ACGT	3 cut(s)	232, 261, 1394
HpyF3I	CTNAG	3 cut(s)	554, 1043, 2040
HpySE526I	ACGT	3 cut(s)	232, 261, 1394
Hsp92I	GRCGYC	5 cut(s)	261, 366, 375, 1429, 1732
HspAI	GCGC	2 cut(s)	566, 1216
Ksp22I	TGATCA	1 cut(s)	210
Kzo9I	GATC	7 cut(s)	210, 255, 447, 1046, 1168, 1587, 1817
LmnI	GCTCC	6 cut(s)	148, 626, 818, 1385, 1420, 1440
LweI	GCATC	4 cut(s)	498, 901, 1227, 1519
MabI	ACCWGGT	1 cut(s)	1870
MaeI	CTAG	2 cut(s)	833, 1898
MaeII	ACGT	3 cut(s)	232, 261, 1394
MaeIII	GTNAC	2 cut(s)	376, 1099
MalI	GATC	7 cut(s)	212, 257, 449, 1048, 1170, 1589, 1819
MboI	GATC	7 cut(s)	210, 255, 447, 1046, 1168, 1587, 1817
MboII	GAAGA	7 cut(s)	267, 275, 678, 693, 1328, 1667, 1793
MfeI	CAATTG	1 cut(s)	612
MflI	RGATCY	2 cut(s)	1046, 1168
MhlI	GDGCHC	4 cut(s)	823, 1444, 1879, 1971
MlsI	TGGCCA	2 cut(s)	237, 638
MluCI	AATT	8 cut(s)	312, 612, 851, 920, 1125, 1486, 1626, 1881
MluNI	TGGCCA	2 cut(s)	237, 638
MlyI	GAGTC	4 cut(s)	1341, 1751, 1906, 1947
MmeI	TCCRAC	3 cut(s)	187, 1398, 1462
Mox20I	TGGCCA	2 cut(s)	237, 638
Mph1103I	ATGCAT	4 cut(s)	939, 1096, 1378, 1755
MroXI	GAANNNNTTC	1 cut(s)	923
MscI	TGGCCA	2 cut(s)	237, 638
MslI	CAYNNNNRTG	4 cut(s)	231, 548, 644, 1611
Msp20I	TGGCCA	2 cut(s)	237, 638
MspA1I	CMGCKG	2 cut(s)	601, 1027
MspI	CCGG	5 cut(s)	219, 323, 363, 388, 1253
MspR9I	CCNGG	6 cut(s)	323, 388, 1223, 1598, 1776, 1872
MunI	CAATTG	1 cut(s)	612
Mva1269I	GAATGC	4 cut(s)	658, 874, 1189, 1585
MvaI	CCWGG	4 cut(s)	1223, 1598, 1776, 1872
MvnI	CGCG	1 cut(s)	61
NciI	CCSGG	2 cut(s)	323, 388
NdeII	GATC	7 cut(s)	210, 255, 447, 1046, 1168, 1587, 1817
NlaIV	GGNNCC	3 cut(s)	720, 1968, 1984
NmeAIII	GCCGAG	1 cut(s)	802
NmuCI	GTSAC	1 cut(s)	376
NsiI	ATGCAT	4 cut(s)	939, 1096, 1378, 1755
NspI	RCATGY	1 cut(s)	1034
OliI	CACNNNNGTG	3 cut(s)	231, 548, 644
PaeI	GCATGC	1 cut(s)	1034
PagI	TCATGA	1 cut(s)	907
PcsI	WCGNNNNNNNCGW	2 cut(s)	776, 1435
PctI	GAATGC	4 cut(s)	658, 874, 1189, 1585
PdmI	GAANNNNTTC	1 cut(s)	923
PfeI	GAWTC	3 cut(s)	949, 1466, 1565
PflFI	GACNNNGTC	2 cut(s)	329, 428
PfoI	TCCNGGA	1 cut(s)	1221
PleI	GAGTC	4 cut(s)	1341, 1751, 1906, 1947
PmaCI	CACGTG	1 cut(s)	233
PmlI	CACGTG	1 cut(s)	233
PpsI	GAGTC	4 cut(s)	1341, 1751, 1906, 1947
Ppu21I	YACGTR	1 cut(s)	233
PpuMI	RGGWCCY	1 cut(s)	808
Psp124BI	GAGCTC	1 cut(s)	823
Psp5II	RGGWCCY	1 cut(s)	808
Psp6I	CCWGG	4 cut(s)	1221, 1596, 1774, 1870
PspCI	CACGTG	1 cut(s)	233
PspFI	CCCAGC	1 cut(s)	1971
PspGI	CCWGG	4 cut(s)	1221, 1596, 1774, 1870
PspN4I	GGNNCC	3 cut(s)	720, 1968, 1984
PspPI	GGNCC	3 cut(s)	385, 525, 808
PspPPI	RGGWCCY	1 cut(s)	808
PstI	CTGCAG	1 cut(s)	1948
PstNI	CAGNNNCTG	1 cut(s)	601
PsuI	RGATCY	2 cut(s)	1046, 1168
PsyI	GACNNNGTC	2 cut(s)	329, 428
PvuII	CAGCTG	2 cut(s)	601, 1027
RsaI	GTAC	1 cut(s)	1992
RsaNI	GTAC	1 cut(s)	1991
RseI	CAYNNNNRTG	4 cut(s)	231, 548, 644, 1611
SacI	GAGCTC	1 cut(s)	823
Sau3AI	GATC	7 cut(s)	210, 255, 447, 1046, 1168, 1587, 1817
Sau96I	GGNCC	3 cut(s)	385, 525, 808
SchI	GAGTC	4 cut(s)	1341, 1751, 1906, 1947
ScrFI	CCNGG	6 cut(s)	323, 388, 1223, 1598, 1776, 1872
SduI	GDGCHC	4 cut(s)	823, 1444, 1879, 1971
SexAI	ACCWGGT	1 cut(s)	1870
SfaNI	GCATC	4 cut(s)	498, 901, 1227, 1519
SfcI	CTRYAG	1 cut(s)	1944
SinI	GGWCC	1 cut(s)	808
SmiMI	CAYNNNNRTG	4 cut(s)	231, 548, 644, 1611
SmlI	CTYRAG	1 cut(s)	46
SmoI	CTYRAG	1 cut(s)	46
SphI	GCATGC	1 cut(s)	1034
Sse9I	AATT	8 cut(s)	312, 612, 851, 920, 1125, 1486, 1626, 1881
SsiI	CCGC	7 cut(s)	17, 61, 74, 268, 516, 725, 1119
SspI	AATATT	2 cut(s)	1191, 1739
SspMI	CTAG	2 cut(s)	833, 1898
SstI	GAGCTC	1 cut(s)	823
StyD4I	CCNGG	6 cut(s)	321, 386, 1221, 1596, 1774, 1870
StyI	CCWWGG	1 cut(s)	1839
TaaI	ACNGT	5 cut(s)	430, 693, 1066, 1279, 1538
TaiI	ACGT	3 cut(s)	235, 264, 1397
TaqI	TCGA	8 cut(s)	26, 65, 258, 306, 499, 650, 952, 1350
TasI	AATT	8 cut(s)	312, 612, 851, 920, 1125, 1486, 1626, 1881
TatI	WGTACW	1 cut(s)	1990
TauI	GCSGC	1 cut(s)	728
TfiI	GAWTC	3 cut(s)	949, 1466, 1565
TscAI	CASTG	4 cut(s)	406, 433, 553, 991
TseFI	GTSAC	1 cut(s)	376
Tsp45I	GTSAC	1 cut(s)	376
TspDTI	ATGAA	5 cut(s)	83, 759, 861, 1146, 1340
TspGWI	ACGGA	5 cut(s)	399, 1150, 1427, 1558, 1683
TspRI	CASTG	4 cut(s)	406, 433, 553, 991
Tth111I	GACNNNGTC	2 cut(s)	329, 428
VneI	GTGCAC	1 cut(s)	1875
VpaK11BI	GGWCC	1 cut(s)	808
XapI	RAATTY	2 cut(s)	312, 1486
XceI	RCATGY	1 cut(s)	1034
XcmI	CCANNNNNNNNNTGG	1 cut(s)	343
XmiI	GTMKAC	2 cut(s)	264, 1524
XmnI	GAANNNNTTC	1 cut(s)	923
XspI	CTAG	2 cut(s)	833, 1898
ZraI	GACGTC	1 cut(s)	262
Zsp2I	ATGCAT	4 cut(s)	939, 1096, 1378, 1755

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.