Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010184.1

Orthogroup ID

OG0002257

Physical Location & Seq

Genomic Coordinates Forward (+)

56217 .. 58672

Gene Structure 2456 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010184.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

atggtagtgcttcctttccaacatttcgagcgcgcagcattagctttcttgcagaagcagccaactccagctgtgtccatgttgacccaaatggaccaaaccccaaaccccaactccatcccaaccatgaaacgaagcaccaggaagaggcttcgagcttgcagcaaccacagctatgagctcaccacgttttgcgaaccgggtcgcccgattagtccaaccggcccattccgggacaacattttcatgtttcttcaacaatgtgcggagctcaccgacttcacagttcaaggcatgagtgtttggttcactcttcttcgcagccgtgagtgtttggttcctctttttactattgaagagaacgtgaacacctctaaaaccgagttctgtgatcactgcttgtcaactgattggactaaccattttgtgtcgaagagaaagtaccacatgataattcccaaggatgattgttggactaagcctctagatgatagtgtcctacaaggcacaacgcatctgttacatggtatgattcactgtgatgggattgggcatttgctatgcattaatggacttaaagggggttctaagcatctttgtggcagagagatcatggatctttgggatcggatttgcacaaatcttagaaccaggaaaatcacagttgaagatttctcaaagaagcggtccatggaacttcgactgctccatgggattgcttatggacatccttggttcggtagatgggggtacaggttttgccatggaagctttggggttgcagaagaaacatatgaaagagcgcttgatattctcagctcaatagagcttgaaaagatcatccaagattttagtgacatggaagagtgtgaagagctgaagagagtaattcattgctacaaacattggagcgaatcaagcttggttacaatcaaagatcttctcaaatttatgctcactgtcaaggctggctgtcctgtgcaaagaaaagtcagaaaaccgaaaccgcctactgctactactctttcatccctccggatcaagtcccatctgtttgctgatgttatttctcacaaccccggcagacatcctgcaagaagacaaaagatggccgcagatgcaattgtgcatgtattgagagaaaatgaaaagaaaggctttgtgaatggtgagatggccaggcaagatgtaagagatgcagctctgttgcatagtagaagaagagggttgcctatcagagatataggtttgttggataatgtgctgagcaagctggacaatgtgattattgggaatcacattgtctgccgcaagctgcatgcgatgcctggaattaagactggaattaggaaatataccgttcatgatcttctcgatggagtcaagtccttggaacctgagagagagttacttcttccatcacaagctctagttcctgatgtttacagtgatgttctttacttgtacaagaatgtactgttgggatatccagaatccaagttggtacaattggctactcaagtggtgttgaacaccaagtactttgtaaaggaatatcgattcggggataaggatgagcaagagcagtgccttgacattcctttgccaagtatgactgatagtgctaatcctgctgaatcaggaatctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000212 GO:0000226 GO:0000228 GO:0000280 GO:0000785 GO:0000790 GO:0000791 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005719 GO:0006323 GO:0006355 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007059 GO:0007060 GO:0007140 GO:0007275 GO:0007276 GO:0008134 GO:0008150 GO:0009555 GO:0009889 GO:0009987 GO:0010032 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0030154 GO:0030261 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0033613 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0045132 GO:0048229 GO:0048232 GO:0048235 GO:0048285 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0051321 GO:0051704 GO:0055046 GO:0060255 GO:0065007 GO:0070013 GO:0070192 GO:0071103 GO:0071840 GO:0080090 GO:0097159 GO:0098813 GO:0140013 GO:1901363 GO:1903046 GO:1903506 GO:1990188 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

549

Amino Acids

62.77

Weight (kDa)

8.7

Isoelectric Point (pI)

45.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66170
fragaria_vesca	FvH4_1g29990 FvH4_1g29990 FvH4_1g29990 FvH4_6g02390
malus_domestica	MD09G1267100.v1.1 MD17G1254900.v1.1 MD17G1255100.v1.1 MD17G1260200.v1.1
prunus_persica	Prupe.3G164800_v2.0.a1
pyrus_communis	pycom12401g00150 pycom461g00270
rosa_chinensis	RchiOBHm_Chr3g0450161 RchiOBHm_Chr3g0492331
rosa_laevigata	RLG00000022781 RLG00000022872 RLG00000022874 RLG00000022875 RLG00000025750
rosa_multiflora	Rmu_co8200976.1_g000001 Rmu_sc0003156.1_g000026 Rmu_sc0010184.1_g000005 Rmu_sc0010184.1_g000015 Rmu_sc0020297.1_g000001
rosa_roxburghii	Rroxscaffold_3G00226630 Rroxscaffold_6G00392410 Rroxscaffold_6G00427920
rosa_rugosa	Rorug02G0625900 Rorug03G0253300
rosa_samantha	Rh2AG397300 Rh2CG383900 Rh3AG025300 Rh3AG303200 Rh3BG025900 Rh3BG339200 Rh3BG339300 Rh3CG024800 Rh3CG336400 Rh3DG025900 Rh3DG327500 Rh3DG338500
rosa_wichuraiana	Rw3G002030 Rw3G026750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	33
AccIII	TCCGGA	1 cut(s)	1035
AciI	CCGC	5 cut(s)	266, 685, 1007, 1113, 1309
AclWI	GGATC	3 cut(s)	624, 633, 1046
AcoI	YGGCCR	2 cut(s)	1110, 1176
AcsI	RAATTY	1 cut(s)	947
AcuI	CTGAAG	1 cut(s)	899
AfaI	GTAC	6 cut(s)	443, 752, 1466, 1476, 1506, 1541
AfeI	AGCGCT	1 cut(s)	804
AfiI	CCNNNNNNNGG	3 cut(s)	147, 232, 737
AgsI	TTSAA	6 cut(s)	257, 290, 356, 668, 833, 1531
AjnI	CCWGG	4 cut(s)	140, 650, 1178, 1327
AjuI	GAANNNNNNNTTGG	2 cut(s)	1463, 1495
Alw21I	GWGCWC	2 cut(s)	183, 273
AlwI	GGATC	3 cut(s)	624, 633, 1046
Aor13HI	TCCGGA	1 cut(s)	1035
Aor51HI	AGCGCT	1 cut(s)	804
AoxI	GGCC	3 cut(s)	223, 1110, 1176
ApeKI	GCWGC	6 cut(s)	35, 58, 162, 321, 1199, 1315
ApoI	RAATTY	1 cut(s)	947
ArsI	GACNNNNNNTTYG	2 cut(s)	671, 703
AseI	ATTAAT	1 cut(s)	567
AspLEI	GCGC	3 cut(s)	33, 35, 805
AspS9I	GGNCC	3 cut(s)	94, 224, 687
AsuC2I	CCSGG	3 cut(s)	201, 233, 1080
AsuHPI	GGTGA	3 cut(s)	175, 265, 1181
AvaII	GGWCC	2 cut(s)	94, 687
BalI	TGGCCA	1 cut(s)	1178
BanII	GRGCYC	2 cut(s)	183, 273
BarI	GAAGNNNNNNTAC	2 cut(s)	425, 457
BbsI	GAAGAC	1 cut(s)	1105
Bbv12I	GWGCWC	2 cut(s)	183, 273
BbvI	GCAGC	6 cut(s)	47, 70, 174, 333, 1211, 1302
BccI	CCATC	8 cut(s)	125, 536, 738, 1056, 1102, 1168, 1370, 1426
BceAI	ACGGC	1 cut(s)	309
BciT130I	CCWGG	4 cut(s)	142, 652, 1180, 1329
BclI	TGATCA	1 cut(s)	391
BcnI	CCSGG	3 cut(s)	201, 233, 1080
BfaI	CTAG	2 cut(s)	485, 1430
BfoI	RGCGCY	1 cut(s)	806
BglII	AGATCT	1 cut(s)	937
BisI	GCNGC	8 cut(s)	36, 59, 163, 322, 1113, 1200, 1309, 1316
BlpI	GCTNAGC	1 cut(s)	1265
BlsI	GCNGC	8 cut(s)	37, 60, 164, 323, 1114, 1201, 1310, 1317
BmcAI	AGTACT	1 cut(s)	1541
Bme1390I	CCNGG	7 cut(s)	142, 201, 233, 652, 1080, 1180, 1329
Bme18I	GGWCC	2 cut(s)	94, 687
BmgT120I	GGNCC	3 cut(s)	94, 224, 687
BmiI	GGNNCC	2 cut(s)	339, 1395
BmrFI	CCNGG	7 cut(s)	142, 201, 233, 652, 1080, 1180, 1329
BmsI	GCATC	5 cut(s)	523, 601, 1108, 1186, 1314
BpiI	GAAGAC	1 cut(s)	1105
BpmI	CTGGAG	1 cut(s)	51
Bpu1102I	GCTNAGC	1 cut(s)	1265
BpuEI	CTTGAG	1 cut(s)	1503
BpuMI	CCSGG	3 cut(s)	201, 233, 1080
Bsa29I	ATCGAT	1 cut(s)	1558
BsaJI	CCNNGG	7 cut(s)	459, 690, 709, 731, 763, 1078, 1389
BsaWI	WCCGGW	1 cut(s)	1035
BsaXI	ACNNNNNCTCC	2 cut(s)	98, 128
Bsc4I	CCNNNNNNNGG	3 cut(s)	147, 232, 737
Bse118I	RCCGGY	1 cut(s)	221
Bse1I	ACTGG	1 cut(s)	1345
Bse3DI	GCAATG	1 cut(s)	892
BseAI	TCCGGA	1 cut(s)	1035
BseBI	CCWGG	4 cut(s)	142, 652, 1180, 1329
BseCI	ATCGAT	1 cut(s)	1558
BseDI	CCNNGG	7 cut(s)	459, 690, 709, 731, 763, 1078, 1389
BseGI	GGATG	7 cut(s)	117, 469, 727, 840, 1028, 1087, 1579
BseLI	CCNNNNNNNGG	3 cut(s)	147, 232, 737
BseMI	GCAATG	1 cut(s)	892
BseMII	CTCAG	3 cut(s)	829, 1256, 1389
BseNI	ACTGG	1 cut(s)	1345
BsePI	GCGCGC	1 cut(s)	31
BseXI	GCAGC	6 cut(s)	47, 70, 174, 333, 1211, 1302
Bsh1236I	CGCG	1 cut(s)	33
BshFI	GGCC	3 cut(s)	225, 1112, 1178
BshVI	ATCGAT	1 cut(s)	1558
BsiHKAI	GWGCWC	2 cut(s)	183, 273
BsiSI	CCGG	5 cut(s)	200, 222, 232, 1036, 1080
BslFI	GGGAC	2 cut(s)	248, 1030
BslI	CCNNNNNNNGG	3 cut(s)	147, 232, 737
BsmFI	GGGAC	2 cut(s)	248, 1030
BsnI	GGCC	3 cut(s)	225, 1112, 1178
Bsp1286I	GDGCHC	2 cut(s)	183, 273
Bsp13I	TCCGGA	1 cut(s)	1035
Bsp1407I	TGTACA	1 cut(s)	1464
Bsp143I	GATC	8 cut(s)	391, 609, 616, 625, 837, 937, 1038, 1366
Bsp1720I	GCTNAGC	1 cut(s)	1265
Bsp19I	CCATGG	3 cut(s)	690, 709, 763
BspACI	CCGC	5 cut(s)	266, 685, 1007, 1113, 1309
BspANI	GGCC	3 cut(s)	225, 1112, 1178
BspCNI	CTCAG	3 cut(s)	828, 1257, 1390
BspDI	ATCGAT	1 cut(s)	1558
BspEI	TCCGGA	1 cut(s)	1035
BspFNI	CGCG	1 cut(s)	33
BspHI	TCATGA	1 cut(s)	1363
BspLI	GGNNCC	2 cut(s)	339, 1395
BspPI	GGATC	3 cut(s)	624, 633, 1046
BspQI	GCTCTTC	1 cut(s)	867
BsrDI	GCAATG	1 cut(s)	892
BsrFI	RCCGGY	1 cut(s)	221
BsrGI	TGTACA	1 cut(s)	1464
BsrI	ACTGG	1 cut(s)	1345
BssAI	RCCGGY	1 cut(s)	221
BssECI	CCNNGG	7 cut(s)	459, 690, 709, 731, 763, 1078, 1389
BssHII	GCGCGC	1 cut(s)	31
BssMI	GATC	8 cut(s)	391, 609, 616, 625, 837, 937, 1038, 1366
BssT1I	CCWWGG	6 cut(s)	459, 690, 709, 731, 763, 1389
Bst2UI	CCWGG	4 cut(s)	142, 652, 1180, 1329
Bst4CI	ACNGT	7 cut(s)	286, 539, 664, 961, 1360, 1448, 1479
Bst6I	CTCTTC	8 cut(s)	140, 318, 351, 428, 858, 867, 875, 1216
BstAPI	GCANNNNNTGC	1 cut(s)	1324
BstAUI	TGTACA	1 cut(s)	1464
BstC8I	GCNNGC	6 cut(s)	33, 160, 970, 1271, 1313, 1320
BstDEI	CTNAG	6 cut(s)	477, 588, 644, 815, 1265, 1398
BstDSI	CCRYGG	3 cut(s)	690, 709, 763
BstF5I	GGATG	7 cut(s)	117, 469, 727, 840, 1028, 1087, 1579
BstFNI	CGCG	1 cut(s)	33
BstH2I	RGCGCY	1 cut(s)	806
BstHHI	GCGC	3 cut(s)	33, 35, 805
BstKTI	GATC	8 cut(s)	394, 612, 619, 628, 840, 940, 1041, 1369
BstMBI	GATC	8 cut(s)	391, 609, 616, 625, 837, 937, 1038, 1366
BstMWI	GCNNNNNNNGC	9 cut(s)	41, 58, 171, 768, 918, 1118, 1270, 1324, 1631
BstNI	CCWGG	4 cut(s)	142, 652, 1180, 1329
BstNSI	RCATGY	2 cut(s)	1133, 1322
BstSCI	CCNGG	7 cut(s)	140, 199, 231, 650, 1078, 1178, 1327
BstUI	CGCG	1 cut(s)	33
BstV1I	GCAGC	6 cut(s)	47, 70, 174, 333, 1211, 1302
BstV2I	GAAGAC	1 cut(s)	1105
BstX2I	RGATCY	2 cut(s)	616, 937
BstYI	RGATCY	2 cut(s)	616, 937
Bsu15I	ATCGAT	1 cut(s)	1558
BsuRI	GGCC	3 cut(s)	225, 1112, 1178
BsuTUI	ATCGAT	1 cut(s)	1558
BtgI	CCRYGG	3 cut(s)	690, 709, 763
BtgZI	GCGATG	1 cut(s)	1337
BtsCI	GGATG	7 cut(s)	117, 469, 727, 840, 1028, 1087, 1579
BtsI	GCAGTG	2 cut(s)	394, 1592
BtsIMutI	CAGTG	5 cut(s)	394, 535, 957, 1453, 1592
Cac8I	GCNNGC	6 cut(s)	33, 160, 970, 1271, 1313, 1320
CciI	TCATGA	1 cut(s)	1363
CfoI	GCGC	3 cut(s)	33, 35, 805
Cfr10I	RCCGGY	1 cut(s)	221
Cfr13I	GGNCC	3 cut(s)	94, 224, 687
ClaI	ATCGAT	1 cut(s)	1558
Csp6I	GTAC	6 cut(s)	442, 751, 1465, 1475, 1505, 1540
CviQI	GTAC	6 cut(s)	442, 751, 1465, 1475, 1505, 1540
DdeI	CTNAG	6 cut(s)	477, 588, 644, 815, 1265, 1398
DpnI	GATC	8 cut(s)	393, 611, 618, 627, 839, 939, 1040, 1368
DpnII	GATC	8 cut(s)	391, 609, 616, 625, 837, 937, 1038, 1366
EaeI	YGGCCR	2 cut(s)	1110, 1176
Eam1104I	CTCTTC	8 cut(s)	140, 318, 351, 428, 858, 867, 875, 1216
EarI	CTCTTC	8 cut(s)	140, 318, 351, 428, 858, 867, 875, 1216
Ecl136II	GAGCTC	2 cut(s)	181, 271
Eco130I	CCWWGG	6 cut(s)	459, 690, 709, 731, 763, 1389
Eco24I	GRGCYC	2 cut(s)	183, 273
Eco32I	GATATC	1 cut(s)	1487
Eco47I	GGWCC	2 cut(s)	94, 687
Eco47III	AGCGCT	1 cut(s)	804
Eco53kI	GAGCTC	2 cut(s)	181, 271
Eco57I	CTGAAG	1 cut(s)	899
EcoICRI	GAGCTC	2 cut(s)	181, 271
EcoRII	CCWGG	4 cut(s)	140, 650, 1178, 1327
EcoRV	GATATC	1 cut(s)	1487
EcoT14I	CCWWGG	6 cut(s)	459, 690, 709, 731, 763, 1389
EcoT22I	ATGCAT	1 cut(s)	566
EcoT38I	GRGCYC	2 cut(s)	183, 273
ErhI	CCWWGG	6 cut(s)	459, 690, 709, 731, 763, 1389
FalI	AAGNNNNNCTT	2 cut(s)	1142, 1174
FaqI	GGGAC	2 cut(s)	248, 1030
FauNDI	CATATG	1 cut(s)	793
FbaI	TGATCA	1 cut(s)	391
Fnu4HI	GCNGC	8 cut(s)	36, 59, 163, 322, 1113, 1200, 1309, 1316
FokI	GGATG	7 cut(s)	104, 476, 714, 827, 1015, 1074, 1586
FriOI	GRGCYC	2 cut(s)	183, 273
Fsp4HI	GCNGC	8 cut(s)	36, 59, 163, 322, 1113, 1200, 1309, 1316
FspBI	CTAG	2 cut(s)	485, 1430
GlaI	GCGC	3 cut(s)	32, 34, 804
GluI	GCNGC	8 cut(s)	36, 59, 163, 322, 1113, 1200, 1309, 1316
GsuI	CTGGAG	1 cut(s)	51
HaeII	RGCGCY	1 cut(s)	806
HaeIII	GGCC	3 cut(s)	225, 1112, 1178
HapII	CCGG	5 cut(s)	200, 222, 232, 1036, 1080
HhaI	GCGC	3 cut(s)	33, 35, 805
Hin6I	GCGC	3 cut(s)	31, 33, 803
HinP1I	GCGC	3 cut(s)	31, 33, 803
HincII	GTYRAC	2 cut(s)	84, 405
HindII	GTYRAC	2 cut(s)	84, 405
HindIII	AAGCTT	2 cut(s)	769, 919
HinfI	GANTC	8 cut(s)	532, 914, 1294, 1380, 1493, 1560, 1637, 1644
HpaII	CCGG	5 cut(s)	200, 222, 232, 1036, 1080
HphI	GGTGA	3 cut(s)	175, 265, 1181
Hpy166II	GTNNAC	5 cut(s)	84, 309, 367, 405, 1444
Hpy188I	TCNGA	3 cut(s)	630, 995, 1238
Hpy188III	TCNNGA	7 cut(s)	485, 1036, 1364, 1373, 1436, 1490, 1641
Hpy8I	GTNNAC	5 cut(s)	84, 309, 367, 405, 1444
HpyCH4III	ACNGT	7 cut(s)	286, 539, 664, 961, 1360, 1448, 1479
HpyCH4IV	ACGT	2 cut(s)	188, 363
HpyF10VI	GCNNNNNNNGC	9 cut(s)	41, 58, 171, 768, 918, 1118, 1270, 1324, 1631
HpyF3I	CTNAG	6 cut(s)	477, 588, 644, 815, 1265, 1398
HpySE526I	ACGT	2 cut(s)	188, 363
HspAI	GCGC	3 cut(s)	31, 33, 803
Kpn2I	TCCGGA	1 cut(s)	1035
Ksp22I	TGATCA	1 cut(s)	391
Kzo9I	GATC	8 cut(s)	391, 609, 616, 625, 837, 937, 1038, 1366
LguI	GCTCTTC	1 cut(s)	867
LmnI	GCTCC	3 cut(s)	268, 711, 909
Lsp1109I	GCAGC	6 cut(s)	47, 70, 174, 333, 1211, 1302
LweI	GCATC	5 cut(s)	523, 601, 1108, 1186, 1314
MaeI	CTAG	2 cut(s)	485, 1430
MaeII	ACGT	2 cut(s)	188, 363
MaeIII	GTNAC	4 cut(s)	519, 854, 925, 1407
MalI	GATC	8 cut(s)	393, 611, 618, 627, 839, 939, 1040, 1368
MboI	GATC	8 cut(s)	391, 609, 616, 625, 837, 937, 1038, 1366
MfeI	CAATTG	2 cut(s)	1122, 1508
MflI	RGATCY	2 cut(s)	616, 937
MhlI	GDGCHC	2 cut(s)	183, 273
MlsI	TGGCCA	1 cut(s)	1178
MluCI	AATT	7 cut(s)	453, 888, 947, 1122, 1332, 1344, 1508
MluNI	TGGCCA	1 cut(s)	1178
MlyI	GAGTC	1 cut(s)	1389
MmeI	TCCRAC	4 cut(s)	43, 242, 452, 1233
MnlI	CCTC	6 cut(s)	141, 351, 382, 492, 1043, 1217
Mox20I	TGGCCA	1 cut(s)	1178
Mph1103I	ATGCAT	1 cut(s)	566
MroI	TCCGGA	1 cut(s)	1035
MscI	TGGCCA	1 cut(s)	1178
MseI	TTAA	3 cut(s)	567, 576, 1335
MslI	CAYNNNNRTG	4 cut(s)	174, 245, 540, 597
Msp20I	TGGCCA	1 cut(s)	1178
MspA1I	CMGCKG	1 cut(s)	71
MspI	CCGG	5 cut(s)	200, 222, 232, 1036, 1080
MspR9I	CCNGG	7 cut(s)	142, 201, 233, 652, 1080, 1180, 1329
MunI	CAATTG	2 cut(s)	1122, 1508
MvaI	CCWGG	4 cut(s)	142, 652, 1180, 1329
MvnI	CGCG	1 cut(s)	33
MwoI	GCNNNNNNNGC	9 cut(s)	41, 58, 171, 768, 918, 1118, 1270, 1324, 1631
NciI	CCSGG	3 cut(s)	201, 233, 1080
NcoI	CCATGG	3 cut(s)	690, 709, 763
NdeI	CATATG	1 cut(s)	793
NdeII	GATC	8 cut(s)	391, 609, 616, 625, 837, 937, 1038, 1366
NlaIV	GGNNCC	2 cut(s)	339, 1395
NmuCI	GTSAC	1 cut(s)	854
NsiI	ATGCAT	1 cut(s)	566
NspI	RCATGY	2 cut(s)	1133, 1322
PaeI	GCATGC	1 cut(s)	1322
PagI	TCATGA	1 cut(s)	1363
PauI	GCGCGC	1 cut(s)	31
PciSI	GCTCTTC	1 cut(s)	867
PfeI	GAWTC	7 cut(s)	532, 914, 1294, 1493, 1560, 1637, 1644
PfoI	TCCNGGA	1 cut(s)	231
PkrI	GCNGC	8 cut(s)	37, 60, 164, 323, 1114, 1201, 1310, 1317
PleI	GAGTC	1 cut(s)	1388
PpsI	GAGTC	1 cut(s)	1388
PshBI	ATTAAT	1 cut(s)	567
Psp124BI	GAGCTC	2 cut(s)	183, 273
Psp6I	CCWGG	4 cut(s)	140, 650, 1178, 1327
PspGI	CCWGG	4 cut(s)	140, 650, 1178, 1327
PspN4I	GGNNCC	2 cut(s)	339, 1395
PspPI	GGNCC	3 cut(s)	94, 224, 687
PsrI	GAACNNNNNNTAC	2 cut(s)	1523, 1555
PsuI	RGATCY	2 cut(s)	616, 937
PteI	GCGCGC	1 cut(s)	31
PvuII	CAGCTG	1 cut(s)	71
RsaI	GTAC	6 cut(s)	443, 752, 1466, 1476, 1506, 1541
RsaNI	GTAC	6 cut(s)	442, 751, 1465, 1475, 1505, 1540
RseI	CAYNNNNRTG	4 cut(s)	174, 245, 540, 597
SacI	GAGCTC	2 cut(s)	183, 273
SapI	GCTCTTC	1 cut(s)	867
SaqAI	TTAA	3 cut(s)	567, 576, 1335
SatI	GCNGC	8 cut(s)	36, 59, 163, 322, 1113, 1200, 1309, 1316
Sau3AI	GATC	8 cut(s)	391, 609, 616, 625, 837, 937, 1038, 1366
Sau96I	GGNCC	3 cut(s)	94, 224, 687
ScaI	AGTACT	1 cut(s)	1541
SchI	GAGTC	1 cut(s)	1389
ScrFI	CCNGG	7 cut(s)	142, 201, 233, 652, 1080, 1180, 1329
SduI	GDGCHC	2 cut(s)	183, 273
SfaNI	GCATC	5 cut(s)	523, 601, 1108, 1186, 1314
SinI	GGWCC	2 cut(s)	94, 687
SmiMI	CAYNNNNRTG	4 cut(s)	174, 245, 540, 597
SmlI	CTYRAG	1 cut(s)	1518
SmoI	CTYRAG	1 cut(s)	1518
SphI	GCATGC	1 cut(s)	1322
Sse9I	AATT	7 cut(s)	453, 888, 947, 1122, 1332, 1344, 1508
SsiI	CCGC	5 cut(s)	266, 685, 1007, 1113, 1309
SspMI	CTAG	2 cut(s)	485, 1430
SstI	GAGCTC	2 cut(s)	183, 273
StyD4I	CCNGG	7 cut(s)	140, 199, 231, 650, 1078, 1178, 1327
StyI	CCWWGG	6 cut(s)	459, 690, 709, 731, 763, 1389
TaaI	ACNGT	7 cut(s)	286, 539, 664, 961, 1360, 1448, 1479
TaiI	ACGT	2 cut(s)	191, 366
TaqI	TCGA	6 cut(s)	27, 154, 431, 700, 1374, 1558
TasI	AATT	7 cut(s)	453, 888, 947, 1122, 1332, 1344, 1508
TatI	WGTACW	3 cut(s)	1464, 1474, 1539
TauI	GCSGC	2 cut(s)	1115, 1311
TfiI	GAWTC	7 cut(s)	532, 914, 1294, 1493, 1560, 1637, 1644
Tru1I	TTAA	3 cut(s)	567, 576, 1335
Tru9I	TTAA	3 cut(s)	567, 576, 1335
TscAI	CASTG	5 cut(s)	401, 542, 964, 1453, 1592
TseFI	GTSAC	1 cut(s)	854
TseI	GCWGC	6 cut(s)	35, 58, 162, 321, 1199, 1315
Tsp45I	GTSAC	1 cut(s)	854
TspDTI	ATGAA	7 cut(s)	143, 235, 810, 881, 1017, 1161, 1352
TspRI	CASTG	5 cut(s)	401, 542, 964, 1453, 1592
VpaK11BI	GGWCC	2 cut(s)	94, 687
VspI	ATTAAT	1 cut(s)	567
XapI	RAATTY	1 cut(s)	947
XbaI	TCTAGA	1 cut(s)	484
XceI	RCATGY	2 cut(s)	1133, 1322
XcmI	CCANNNNNNNNNTGG	1 cut(s)	770
XspI	CTAG	2 cut(s)	485, 1430
ZrmI	AGTACT	1 cut(s)	1541
Zsp2I	ATGCAT	1 cut(s)	566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.