Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0020297.1

Orthogroup ID

OG0002257

Physical Location & Seq

Genomic Coordinates Reverse (-)

396 .. 2871

Gene Structure 2476 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0020297.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

atgcatgctggtaaaaaaattgcatatgaatgtctagtgcttcccttccaacatttcgagcgcgcagtattagctttcttgcagaagcagccaactccagctgtgtccatgtcgacccaaatggaccaaaccccaaaccccaattccatcccaaccaagaaacgaacccccaggaagaggctccgagcttgcagcaaccacagctatgagctcaccacgttttgcgaaccgggtcgcccgattagtccaaccggcccattccgggacaacattttcatgtttcttcaacaatgtgcggagctcaccgacttcacagttcaaggcatgagtgtttggttcactcttcttcgtagccgtgagtgtttggttcctctttttactattgaagagaacgtcaacacctctaaaaccgagttctgtgatcactgcttgtcaactgattggagtaaccattttgtgtcgaagagaaagtaccacatgataattcccaaggatgattgttggactaagcctctagatgatagtgtcttggaaggcacaacgcatctgttacatggtatgattcactgtgatgggattgggcatttgctatgcattaatggacttaaagggggttctaagcatctttgtggcagagagatcatggatctttgggatcggatttgcacaaatcttagaaccaggaaaatcacagttgtagatttctcaaagaagcggtccatggaacttcgactgctccatgggattgcttatggacatccttggttcggtagatgggggtacaggttttgccatggaagctttggggttgcagaagaaacatatgaaagagcgcttgatattctcagctcaatagagcttgaaaagatcatccaagattttagtgacatggaagagtgtgaagagctgaagagagtaattcattgctacaaacattggagcgaatcaagcttggttacaatcaaagatcttctcaaatttatgctcactgtcaaggctggctgtcctgtgcaaagaaaagtcagaaaaccgaaaccgcctactactactactctttcatccctccggatcaagtcccatctgtttgctgatgttatttctcacaaccccggcagacatcctgcaagaagacaaaagatggccgcagatgcaattgtgcatgtattgagagaaaatgaaaagaaaggctttgtgaatggtgagatggccaggcaagatgtaagagatgcagctctgttgcatagtagaagaagagggttgcctatcagagatataggtttgttggataatgtgctgagcaagctggacaatgtgattattgggaatcacattgtctgccgcaagctgcatgcgatgcctggaattaagactggaattaggaaatataccgttcatgatcttctcgatggaatcaagtccttggaacctgagaaagagttacttcttccatcacaagctctagttcctgatgtttacagtgatgttctttacttgtacaagaatgtactgttgggatatccagaatccaagttggtacaattggctactcaagtggtgttgaacaccaagtactttgtaaaggaatatcgattcggggataaggatgagcaagagcagtgccttgacattcctttgccaagtatgactgatagtgctaatcctgctgaatcaggaatctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000212 GO:0000226 GO:0000228 GO:0000280 GO:0000785 GO:0000790 GO:0000791 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005719 GO:0006323 GO:0006355 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007059 GO:0007060 GO:0007140 GO:0007275 GO:0007276 GO:0008134 GO:0008150 GO:0009555 GO:0009889 GO:0009987 GO:0010032 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0030154 GO:0030261 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0033613 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0045132 GO:0048229 GO:0048232 GO:0048235 GO:0048285 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0051321 GO:0051704 GO:0055046 GO:0060255 GO:0065007 GO:0070013 GO:0070192 GO:0071103 GO:0071840 GO:0080090 GO:0097159 GO:0098813 GO:0140013 GO:1901363 GO:1903046 GO:1903506 GO:1990188 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

559

Amino Acids

63.86

Weight (kDa)

8.79

Isoelectric Point (pI)

45.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66170
fragaria_vesca	FvH4_1g29990 FvH4_1g29990 FvH4_1g29990 FvH4_6g02390
malus_domestica	MD09G1267100.v1.1 MD17G1254900.v1.1 MD17G1255100.v1.1 MD17G1260200.v1.1
prunus_persica	Prupe.3G164800_v2.0.a1
pyrus_communis	pycom12401g00150 pycom461g00270
rosa_chinensis	RchiOBHm_Chr3g0450161 RchiOBHm_Chr3g0492331
rosa_laevigata	RLG00000022781 RLG00000022872 RLG00000022874 RLG00000022875 RLG00000025750
rosa_multiflora	Rmu_co8200976.1_g000001 Rmu_sc0003156.1_g000026 Rmu_sc0010184.1_g000005 Rmu_sc0010184.1_g000015 Rmu_sc0020297.1_g000001
rosa_roxburghii	Rroxscaffold_3G00226630 Rroxscaffold_6G00392410 Rroxscaffold_6G00427920
rosa_rugosa	Rorug02G0625900 Rorug03G0253300
rosa_samantha	Rh2AG397300 Rh2CG383900 Rh3AG025300 Rh3AG303200 Rh3BG025900 Rh3BG339200 Rh3BG339300 Rh3CG024800 Rh3CG336400 Rh3DG025900 Rh3DG327500 Rh3DG338500
rosa_wichuraiana	Rw3G002030 Rw3G026750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	113
AccII	CGCG	1 cut(s)	63
AccIII	TCCGGA	1 cut(s)	1065
AciI	CCGC	5 cut(s)	296, 715, 1037, 1143, 1339
AclWI	GGATC	3 cut(s)	654, 663, 1076
AcoI	YGGCCR	2 cut(s)	1140, 1206
AcsI	RAATTY	1 cut(s)	977
AcuI	CTGAAG	1 cut(s)	929
AfaI	GTAC	6 cut(s)	473, 782, 1496, 1506, 1536, 1571
AfeI	AGCGCT	1 cut(s)	834
AfiI	CCNNNNNNNGG	3 cut(s)	177, 262, 767
AgsI	TTSAA	5 cut(s)	287, 320, 386, 863, 1561
AjnI	CCWGG	4 cut(s)	170, 680, 1208, 1357
AjuI	GAANNNNNNNTTGG	4 cut(s)	127, 159, 1493, 1525
Alw21I	GWGCWC	2 cut(s)	213, 303
AlwI	GGATC	3 cut(s)	654, 663, 1076
Aor13HI	TCCGGA	1 cut(s)	1065
Aor51HI	AGCGCT	1 cut(s)	834
AoxI	GGCC	3 cut(s)	253, 1140, 1206
ApeKI	GCWGC	4 cut(s)	88, 192, 1229, 1345
ApoI	RAATTY	1 cut(s)	977
ArsI	GACNNNNNNTTYG	2 cut(s)	701, 733
AseI	ATTAAT	1 cut(s)	597
AspLEI	GCGC	3 cut(s)	63, 65, 835
AspS9I	GGNCC	3 cut(s)	124, 254, 717
AsuC2I	CCSGG	3 cut(s)	231, 263, 1110
AsuHPI	GGTGA	3 cut(s)	205, 295, 1211
AvaII	GGWCC	2 cut(s)	124, 717
BalI	TGGCCA	1 cut(s)	1208
BanII	GRGCYC	2 cut(s)	213, 303
BarI	GAAGNNNNNNTAC	2 cut(s)	455, 487
BbsI	GAAGAC	1 cut(s)	1135
Bbv12I	GWGCWC	2 cut(s)	213, 303
BbvI	GCAGC	4 cut(s)	100, 204, 1241, 1332
BccI	CCATC	8 cut(s)	155, 566, 768, 1086, 1132, 1198, 1400, 1456
BceAI	ACGGC	1 cut(s)	339
BciT130I	CCWGG	4 cut(s)	172, 682, 1210, 1359
BclI	TGATCA	1 cut(s)	421
BcnI	CCSGG	3 cut(s)	231, 263, 1110
BfaI	CTAG	3 cut(s)	35, 515, 1460
BfoI	RGCGCY	1 cut(s)	836
BglII	AGATCT	1 cut(s)	967
BisI	GCNGC	6 cut(s)	89, 193, 1143, 1230, 1339, 1346
BlpI	GCTNAGC	1 cut(s)	1295
BlsI	GCNGC	6 cut(s)	90, 194, 1144, 1231, 1340, 1347
BmcAI	AGTACT	1 cut(s)	1571
Bme1390I	CCNGG	7 cut(s)	172, 231, 263, 682, 1110, 1210, 1359
Bme18I	GGWCC	2 cut(s)	124, 717
BmgT120I	GGNCC	3 cut(s)	124, 254, 717
BmiI	GGNNCC	3 cut(s)	182, 369, 1425
BmrFI	CCNGG	7 cut(s)	172, 231, 263, 682, 1110, 1210, 1359
BmsI	GCATC	5 cut(s)	553, 631, 1138, 1216, 1344
BpiI	GAAGAC	1 cut(s)	1135
BpmI	CTGGAG	1 cut(s)	81
Bpu1102I	GCTNAGC	1 cut(s)	1295
BpuEI	CTTGAG	1 cut(s)	1533
BpuMI	CCSGG	3 cut(s)	231, 263, 1110
Bsa29I	ATCGAT	1 cut(s)	1588
BsaJI	CCNNGG	8 cut(s)	170, 489, 720, 739, 761, 793, 1108, 1419
BsaWI	WCCGGW	1 cut(s)	1065
Bsc4I	CCNNNNNNNGG	3 cut(s)	177, 262, 767
Bse118I	RCCGGY	1 cut(s)	251
Bse1I	ACTGG	1 cut(s)	1375
Bse3DI	GCAATG	1 cut(s)	922
BseAI	TCCGGA	1 cut(s)	1065
BseBI	CCWGG	4 cut(s)	172, 682, 1210, 1359
BseCI	ATCGAT	1 cut(s)	1588
BseDI	CCNNGG	8 cut(s)	170, 489, 720, 739, 761, 793, 1108, 1419
BseGI	GGATG	7 cut(s)	147, 499, 757, 870, 1058, 1117, 1609
BseLI	CCNNNNNNNGG	3 cut(s)	177, 262, 767
BseMI	GCAATG	1 cut(s)	922
BseMII	CTCAG	3 cut(s)	859, 1286, 1419
BseNI	ACTGG	1 cut(s)	1375
BsePI	GCGCGC	1 cut(s)	61
BseXI	GCAGC	4 cut(s)	100, 204, 1241, 1332
Bsh1236I	CGCG	1 cut(s)	63
BshFI	GGCC	3 cut(s)	255, 1142, 1208
BshVI	ATCGAT	1 cut(s)	1588
BsiHKAI	GWGCWC	2 cut(s)	213, 303
BsiSI	CCGG	5 cut(s)	230, 252, 262, 1066, 1110
BslFI	GGGAC	2 cut(s)	278, 1060
BslI	CCNNNNNNNGG	3 cut(s)	177, 262, 767
BsmFI	GGGAC	2 cut(s)	278, 1060
BsnI	GGCC	3 cut(s)	255, 1142, 1208
Bsp1286I	GDGCHC	2 cut(s)	213, 303
Bsp13I	TCCGGA	1 cut(s)	1065
Bsp1407I	TGTACA	1 cut(s)	1494
Bsp143I	GATC	8 cut(s)	421, 639, 646, 655, 867, 967, 1068, 1396
Bsp1720I	GCTNAGC	1 cut(s)	1295
Bsp19I	CCATGG	3 cut(s)	720, 739, 793
BspACI	CCGC	5 cut(s)	296, 715, 1037, 1143, 1339
BspANI	GGCC	3 cut(s)	255, 1142, 1208
BspCNI	CTCAG	3 cut(s)	858, 1287, 1420
BspDI	ATCGAT	1 cut(s)	1588
BspEI	TCCGGA	1 cut(s)	1065
BspFNI	CGCG	1 cut(s)	63
BspHI	TCATGA	1 cut(s)	1393
BspLI	GGNNCC	3 cut(s)	182, 369, 1425
BspPI	GGATC	3 cut(s)	654, 663, 1076
BspQI	GCTCTTC	1 cut(s)	897
BsrDI	GCAATG	1 cut(s)	922
BsrFI	RCCGGY	1 cut(s)	251
BsrGI	TGTACA	1 cut(s)	1494
BsrI	ACTGG	1 cut(s)	1375
BssAI	RCCGGY	1 cut(s)	251
BssECI	CCNNGG	8 cut(s)	170, 489, 720, 739, 761, 793, 1108, 1419
BssHII	GCGCGC	1 cut(s)	61
BssMI	GATC	8 cut(s)	421, 639, 646, 655, 867, 967, 1068, 1396
BssT1I	CCWWGG	6 cut(s)	489, 720, 739, 761, 793, 1419
Bst2UI	CCWGG	4 cut(s)	172, 682, 1210, 1359
Bst4CI	ACNGT	7 cut(s)	316, 569, 694, 991, 1390, 1478, 1509
Bst6I	CTCTTC	8 cut(s)	170, 348, 381, 458, 888, 897, 905, 1246
BstAPI	GCANNNNNTGC	1 cut(s)	1354
BstAUI	TGTACA	1 cut(s)	1494
BstC8I	GCNNGC	7 cut(s)	6, 63, 190, 1000, 1301, 1343, 1350
BstDEI	CTNAG	6 cut(s)	507, 618, 674, 845, 1295, 1428
BstDSI	CCRYGG	3 cut(s)	720, 739, 793
BstF5I	GGATG	7 cut(s)	147, 499, 757, 870, 1058, 1117, 1609
BstFNI	CGCG	1 cut(s)	63
BstH2I	RGCGCY	1 cut(s)	836
BstHHI	GCGC	3 cut(s)	63, 65, 835
BstKTI	GATC	8 cut(s)	424, 642, 649, 658, 870, 970, 1071, 1399
BstMBI	GATC	8 cut(s)	421, 639, 646, 655, 867, 967, 1068, 1396
BstMWI	GCNNNNNNNGC	9 cut(s)	71, 88, 201, 798, 948, 1148, 1300, 1354, 1661
BstNI	CCWGG	4 cut(s)	172, 682, 1210, 1359
BstNSI	RCATGY	3 cut(s)	8, 1163, 1352
BstSCI	CCNGG	7 cut(s)	170, 229, 261, 680, 1108, 1208, 1357
BstUI	CGCG	1 cut(s)	63
BstV1I	GCAGC	4 cut(s)	100, 204, 1241, 1332
BstV2I	GAAGAC	1 cut(s)	1135
BstX2I	RGATCY	2 cut(s)	646, 967
BstYI	RGATCY	2 cut(s)	646, 967
Bsu15I	ATCGAT	1 cut(s)	1588
BsuRI	GGCC	3 cut(s)	255, 1142, 1208
BsuTUI	ATCGAT	1 cut(s)	1588
BtgI	CCRYGG	3 cut(s)	720, 739, 793
BtgZI	GCGATG	1 cut(s)	1367
BtsCI	GGATG	7 cut(s)	147, 499, 757, 870, 1058, 1117, 1609
BtsI	GCAGTG	2 cut(s)	424, 1622
BtsIMutI	CAGTG	5 cut(s)	424, 565, 987, 1483, 1622
Cac8I	GCNNGC	7 cut(s)	6, 63, 190, 1000, 1301, 1343, 1350
CciI	TCATGA	1 cut(s)	1393
CfoI	GCGC	3 cut(s)	63, 65, 835
Cfr10I	RCCGGY	1 cut(s)	251
Cfr13I	GGNCC	3 cut(s)	124, 254, 717
ClaI	ATCGAT	1 cut(s)	1588
Csp6I	GTAC	6 cut(s)	472, 781, 1495, 1505, 1535, 1570
CviQI	GTAC	6 cut(s)	472, 781, 1495, 1505, 1535, 1570
DdeI	CTNAG	6 cut(s)	507, 618, 674, 845, 1295, 1428
DpnI	GATC	8 cut(s)	423, 641, 648, 657, 869, 969, 1070, 1398
DpnII	GATC	8 cut(s)	421, 639, 646, 655, 867, 967, 1068, 1396
EaeI	YGGCCR	2 cut(s)	1140, 1206
Eam1104I	CTCTTC	8 cut(s)	170, 348, 381, 458, 888, 897, 905, 1246
EarI	CTCTTC	8 cut(s)	170, 348, 381, 458, 888, 897, 905, 1246
Ecl136II	GAGCTC	2 cut(s)	211, 301
Eco130I	CCWWGG	6 cut(s)	489, 720, 739, 761, 793, 1419
Eco24I	GRGCYC	2 cut(s)	213, 303
Eco32I	GATATC	1 cut(s)	1517
Eco47I	GGWCC	2 cut(s)	124, 717
Eco47III	AGCGCT	1 cut(s)	834
Eco53kI	GAGCTC	2 cut(s)	211, 301
Eco57I	CTGAAG	1 cut(s)	929
EcoICRI	GAGCTC	2 cut(s)	211, 301
EcoRII	CCWGG	4 cut(s)	170, 680, 1208, 1357
EcoRV	GATATC	1 cut(s)	1517
EcoT14I	CCWWGG	6 cut(s)	489, 720, 739, 761, 793, 1419
EcoT22I	ATGCAT	2 cut(s)	6, 596
EcoT38I	GRGCYC	2 cut(s)	213, 303
ErhI	CCWWGG	6 cut(s)	489, 720, 739, 761, 793, 1419
FalI	AAGNNNNNCTT	4 cut(s)	1172, 1204, 1425, 1457
FaqI	GGGAC	2 cut(s)	278, 1060
FauNDI	CATATG	2 cut(s)	25, 823
FbaI	TGATCA	1 cut(s)	421
FblI	GTMKAC	1 cut(s)	113
Fnu4HI	GCNGC	6 cut(s)	89, 193, 1143, 1230, 1339, 1346
FokI	GGATG	7 cut(s)	134, 506, 744, 857, 1045, 1104, 1616
FriOI	GRGCYC	2 cut(s)	213, 303
Fsp4HI	GCNGC	6 cut(s)	89, 193, 1143, 1230, 1339, 1346
FspBI	CTAG	3 cut(s)	35, 515, 1460
GlaI	GCGC	3 cut(s)	62, 64, 834
GluI	GCNGC	6 cut(s)	89, 193, 1143, 1230, 1339, 1346
GsuI	CTGGAG	1 cut(s)	81
HaeII	RGCGCY	1 cut(s)	836
HaeIII	GGCC	3 cut(s)	255, 1142, 1208
HapII	CCGG	5 cut(s)	230, 252, 262, 1066, 1110
HhaI	GCGC	3 cut(s)	63, 65, 835
Hin6I	GCGC	3 cut(s)	61, 63, 833
HinP1I	GCGC	3 cut(s)	61, 63, 833
HincII	GTYRAC	3 cut(s)	114, 397, 435
HindII	GTYRAC	3 cut(s)	114, 397, 435
HindIII	AAGCTT	2 cut(s)	799, 949
HinfI	GANTC	8 cut(s)	562, 944, 1324, 1410, 1523, 1590, 1667, 1674
HpaII	CCGG	5 cut(s)	230, 252, 262, 1066, 1110
HphI	GGTGA	3 cut(s)	205, 295, 1211
Hpy166II	GTNNAC	5 cut(s)	114, 339, 397, 435, 1474
Hpy188I	TCNGA	4 cut(s)	185, 660, 1025, 1268
Hpy188III	TCNNGA	7 cut(s)	515, 1066, 1394, 1403, 1466, 1520, 1671
Hpy8I	GTNNAC	5 cut(s)	114, 339, 397, 435, 1474
HpyAV	CCTTC	2 cut(s)	55, 527
HpyCH4III	ACNGT	7 cut(s)	316, 569, 694, 991, 1390, 1478, 1509
HpyCH4IV	ACGT	2 cut(s)	218, 393
HpyF10VI	GCNNNNNNNGC	9 cut(s)	71, 88, 201, 798, 948, 1148, 1300, 1354, 1661
HpyF3I	CTNAG	6 cut(s)	507, 618, 674, 845, 1295, 1428
HpySE526I	ACGT	2 cut(s)	218, 393
HspAI	GCGC	3 cut(s)	61, 63, 833
Kpn2I	TCCGGA	1 cut(s)	1065
Ksp22I	TGATCA	1 cut(s)	421
Kzo9I	GATC	8 cut(s)	421, 639, 646, 655, 867, 967, 1068, 1396
LguI	GCTCTTC	1 cut(s)	897
LmnI	GCTCC	4 cut(s)	186, 298, 741, 939
Lsp1109I	GCAGC	4 cut(s)	100, 204, 1241, 1332
LweI	GCATC	5 cut(s)	553, 631, 1138, 1216, 1344
MaeI	CTAG	3 cut(s)	35, 515, 1460
MaeII	ACGT	2 cut(s)	218, 393
MaeIII	GTNAC	5 cut(s)	446, 549, 884, 955, 1437
MalI	GATC	8 cut(s)	423, 641, 648, 657, 869, 969, 1070, 1398
MboI	GATC	8 cut(s)	421, 639, 646, 655, 867, 967, 1068, 1396
MfeI	CAATTG	2 cut(s)	1152, 1538
MflI	RGATCY	2 cut(s)	646, 967
MhlI	GDGCHC	2 cut(s)	213, 303
MlsI	TGGCCA	1 cut(s)	1208
MluCI	AATT	9 cut(s)	18, 142, 483, 918, 977, 1152, 1362, 1374, 1538
MluNI	TGGCCA	1 cut(s)	1208
MmeI	TCCRAC	4 cut(s)	73, 272, 482, 1263
MnlI	CCTC	6 cut(s)	171, 381, 412, 522, 1073, 1247
Mox20I	TGGCCA	1 cut(s)	1208
Mph1103I	ATGCAT	2 cut(s)	6, 596
MroI	TCCGGA	1 cut(s)	1065
MscI	TGGCCA	1 cut(s)	1208
MseI	TTAA	3 cut(s)	597, 606, 1365
MslI	CAYNNNNRTG	5 cut(s)	28, 204, 275, 570, 627
Msp20I	TGGCCA	1 cut(s)	1208
MspA1I	CMGCKG	1 cut(s)	101
MspI	CCGG	5 cut(s)	230, 252, 262, 1066, 1110
MspR9I	CCNGG	7 cut(s)	172, 231, 263, 682, 1110, 1210, 1359
MunI	CAATTG	2 cut(s)	1152, 1538
MvaI	CCWGG	4 cut(s)	172, 682, 1210, 1359
MvnI	CGCG	1 cut(s)	63
MwoI	GCNNNNNNNGC	9 cut(s)	71, 88, 201, 798, 948, 1148, 1300, 1354, 1661
NciI	CCSGG	3 cut(s)	231, 263, 1110
NcoI	CCATGG	3 cut(s)	720, 739, 793
NdeI	CATATG	2 cut(s)	25, 823
NdeII	GATC	8 cut(s)	421, 639, 646, 655, 867, 967, 1068, 1396
NlaIV	GGNNCC	3 cut(s)	182, 369, 1425
NmuCI	GTSAC	1 cut(s)	884
NsiI	ATGCAT	2 cut(s)	6, 596
NspI	RCATGY	3 cut(s)	8, 1163, 1352
PaeI	GCATGC	2 cut(s)	8, 1352
PagI	TCATGA	1 cut(s)	1393
PauI	GCGCGC	1 cut(s)	61
PciSI	GCTCTTC	1 cut(s)	897
PfeI	GAWTC	8 cut(s)	562, 944, 1324, 1410, 1523, 1590, 1667, 1674
PfoI	TCCNGGA	1 cut(s)	261
PkrI	GCNGC	6 cut(s)	90, 194, 1144, 1231, 1340, 1347
PshBI	ATTAAT	1 cut(s)	597
Psp124BI	GAGCTC	2 cut(s)	213, 303
Psp6I	CCWGG	4 cut(s)	170, 680, 1208, 1357
PspGI	CCWGG	4 cut(s)	170, 680, 1208, 1357
PspN4I	GGNNCC	3 cut(s)	182, 369, 1425
PspPI	GGNCC	3 cut(s)	124, 254, 717
PsrI	GAACNNNNNNTAC	2 cut(s)	1553, 1585
PsuI	RGATCY	2 cut(s)	646, 967
PteI	GCGCGC	1 cut(s)	61
PvuII	CAGCTG	1 cut(s)	101
RsaI	GTAC	6 cut(s)	473, 782, 1496, 1506, 1536, 1571
RsaNI	GTAC	6 cut(s)	472, 781, 1495, 1505, 1535, 1570
RseI	CAYNNNNRTG	5 cut(s)	28, 204, 275, 570, 627
SacI	GAGCTC	2 cut(s)	213, 303
SalI	GTCGAC	1 cut(s)	112
SapI	GCTCTTC	1 cut(s)	897
SaqAI	TTAA	3 cut(s)	597, 606, 1365
SatI	GCNGC	6 cut(s)	89, 193, 1143, 1230, 1339, 1346
Sau3AI	GATC	8 cut(s)	421, 639, 646, 655, 867, 967, 1068, 1396
Sau96I	GGNCC	3 cut(s)	124, 254, 717
ScaI	AGTACT	1 cut(s)	1571
ScrFI	CCNGG	7 cut(s)	172, 231, 263, 682, 1110, 1210, 1359
SduI	GDGCHC	2 cut(s)	213, 303
SfaNI	GCATC	5 cut(s)	553, 631, 1138, 1216, 1344
SinI	GGWCC	2 cut(s)	124, 717
SmiMI	CAYNNNNRTG	5 cut(s)	28, 204, 275, 570, 627
SmlI	CTYRAG	1 cut(s)	1548
SmoI	CTYRAG	1 cut(s)	1548
SphI	GCATGC	2 cut(s)	8, 1352
Sse9I	AATT	9 cut(s)	18, 142, 483, 918, 977, 1152, 1362, 1374, 1538
SsiI	CCGC	5 cut(s)	296, 715, 1037, 1143, 1339
SspMI	CTAG	3 cut(s)	35, 515, 1460
SstI	GAGCTC	2 cut(s)	213, 303
StyD4I	CCNGG	7 cut(s)	170, 229, 261, 680, 1108, 1208, 1357
StyI	CCWWGG	6 cut(s)	489, 720, 739, 761, 793, 1419
TaaI	ACNGT	7 cut(s)	316, 569, 694, 991, 1390, 1478, 1509
TaiI	ACGT	2 cut(s)	221, 396
TaqI	TCGA	6 cut(s)	57, 113, 461, 730, 1404, 1588
TasI	AATT	9 cut(s)	18, 142, 483, 918, 977, 1152, 1362, 1374, 1538
TatI	WGTACW	3 cut(s)	1494, 1504, 1569
TauI	GCSGC	2 cut(s)	1145, 1341
TfiI	GAWTC	8 cut(s)	562, 944, 1324, 1410, 1523, 1590, 1667, 1674
Tru1I	TTAA	3 cut(s)	597, 606, 1365
Tru9I	TTAA	3 cut(s)	597, 606, 1365
TscAI	CASTG	5 cut(s)	431, 572, 994, 1483, 1622
TseFI	GTSAC	1 cut(s)	884
TseI	GCWGC	4 cut(s)	88, 192, 1229, 1345
Tsp45I	GTSAC	1 cut(s)	884
TspDTI	ATGAA	7 cut(s)	42, 265, 840, 911, 1047, 1191, 1382
TspRI	CASTG	5 cut(s)	431, 572, 994, 1483, 1622
VpaK11BI	GGWCC	2 cut(s)	124, 717
VspI	ATTAAT	1 cut(s)	597
XapI	RAATTY	1 cut(s)	977
XbaI	TCTAGA	1 cut(s)	514
XceI	RCATGY	3 cut(s)	8, 1163, 1352
XcmI	CCANNNNNNNNNTGG	1 cut(s)	800
XmiI	GTMKAC	1 cut(s)	113
XspI	CTAG	3 cut(s)	35, 515, 1460
ZrmI	AGTACT	1 cut(s)	1571
Zsp2I	ATGCAT	2 cut(s)	6, 596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.