Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0002257

Physical Location & Seq

Genomic Coordinates Forward (+)

36306841 .. 36309123

Gene Structure 2283 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG339300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGGAACTTCGCCTGCTCCATGGAGTTGCTTATGGGCATCCTTGGTTTGGTAGATGGGGTTACAAATTTTGCCATGGAAGCTTTGGCGTCAAAGAGCACATTTATGAAAGAGCACTTGAGATTCTCAGCTCATTAAAACTTGAAAAGATCATCCAAGATTTTAGTGACATGGACCAGTATGAAGAGCTGAAGAAAATTGTTCGTTACTACAGATATTTGAGTGAAACACAGTTAGTTACTATCAAAGATCTTCTCAGATTTATGCTTACTATCAAGGCTTGCTTTCCTGCACAGAGAAACTCGCTACTTCCTACTGCAAAACCTGCAGATGTGATTGAGAATGCAAAACCTGCAACCAGAGAATCCGTTAAGATCAAGCCTCTGATAAAGGAAAAGTCTTCAAAGTATAGGAAGTTTGCTACTGTTGTTTCTCACATGGATAGCAGATGGCCTGCCAGAAGACTAGAGTTTGCAGCAGATGTGATTGTGAATGCGCTGAAAGAAAAGAAAGAGAAGGACTTTAGAAATGGTGGGATGGCCCGGCAAGATGTGCGAGATGCAGCTAGGTTGCATATTGGAGACACAGGTTTGTTGGATTATGTGCTGAAATCACTGAACAATGTGGTTGTTGGGAATCAGGTTGTCTGCCGTTCAGTGAATCCAACCACTCGGATTTTGGAATATACGGTTCATGATCTTAATGATGGGGATAAAGTGTCTGAACCTGAGAAAGAGATGCTTCCCCTACCCCCTCCACCAGCTGCTCCAGTTCCTGGAATTGATGTTTACAGTGATGTTCTTTATTTGTATGAGCATGTACTGTTGGGATATCCAGAATCTGGATTGCTAGAGTTGGCTACACAAGCAGTATTGGACACTAAGCACTTTGTAAAGGAATGTCCATTTAGGGATGAGAAAGAGCAGTTACTGACATTGTTTTGCCAAATCTTGCCAAGTTTGACTGATAAGGAAATTGAATTCAAGAGGGAGTTGCCTCCAGGTGAGATAGTGGTAATGCCACTGGATGCAACTGTTGGAGAGCTAAAGCAGGAAGCTGAGAGTGCAATGAGGGATACATATTGTATCACAGAACAGTTTGTGGTGATGGAAATCAAAGGCTTGGAGGAATCAGATGATATGGAAGTGCTTTCTGGAGCAGTTCAATCGGGTACAGAGGTTGGAGTGAGAGGGAGTGGGATAGATTTAGACACACCGTTGAGGTACCAAGGGGGATCGGACACATGGATGGTGAGATGTGAATGTGGGGCTACAGATGATGATGGTGAAAGGATGGTGGCCTGTGATATATGCGAAGTGTGGCAGCATACACGCTGCTGTGGAATGGAGGATGCTGATGAAGTCCCACGTCTGTTCATTTGCTCAACATGTTACGTTTCACTTGTTCCGCCTAAAACTGAACCTGCAGCTAAATTTGACTGTTCCACTGCGTTTCTGGAGTGGAGACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000212 GO:0000226 GO:0000228 GO:0000280 GO:0000785 GO:0000790 GO:0000791 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005719 GO:0006323 GO:0006355 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007059 GO:0007060 GO:0007140 GO:0007275 GO:0007276 GO:0008134 GO:0008150 GO:0009555 GO:0009889 GO:0009987 GO:0010032 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0030154 GO:0030261 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0033613 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0045132 GO:0048229 GO:0048232 GO:0048235 GO:0048285 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0051321 GO:0051704 GO:0055046 GO:0060255 GO:0065007 GO:0070013 GO:0070192 GO:0071103 GO:0071840 GO:0080090 GO:0097159 GO:0098813 GO:0140013 GO:1901363 GO:1903046 GO:1903506 GO:1990188 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

489

Amino Acids

55.41

Weight (kDa)

5.17

Isoelectric Point (pI)

37.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_plant_repro	PF25874	149 - 232	7e-35	Winged helix-turn-helix domain in plant reproductive proteins
Ubiquitin_At1g33420	PF25565	307 - 399	2.9e-30	At1g33420-like, ubiquitin-like domain
PHD	PF00628	419 - 463	3.8e-06	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66170
fragaria_vesca	FvH4_1g29990 FvH4_1g29990 FvH4_1g29990 FvH4_6g02390
malus_domestica	MD09G1267100.v1.1 MD17G1254900.v1.1 MD17G1255100.v1.1 MD17G1260200.v1.1
prunus_persica	Prupe.3G164800_v2.0.a1
pyrus_communis	pycom12401g00150 pycom461g00270
rosa_chinensis	RchiOBHm_Chr3g0450161 RchiOBHm_Chr3g0492331
rosa_laevigata	RLG00000022781 RLG00000022872 RLG00000022874 RLG00000022875 RLG00000025750
rosa_multiflora	Rmu_co8200976.1_g000001 Rmu_sc0003156.1_g000026 Rmu_sc0010184.1_g000005 Rmu_sc0010184.1_g000015 Rmu_sc0020297.1_g000001
rosa_roxburghii	Rroxscaffold_3G00226630 Rroxscaffold_6G00392410 Rroxscaffold_6G00427920
rosa_rugosa	Rorug02G0625900 Rorug03G0253300
rosa_samantha	Rh2AG397300 Rh2CG383900 Rh3AG025300 Rh3AG303200 Rh3BG025900 Rh3BG339200 Rh3BG339300 Rh3CG024800 Rh3CG336400 Rh3DG025900 Rh3DG327500 Rh3DG338500
rosa_wichuraiana	Rw3G002030 Rw3G026750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	331, 358, 1429
Acc65I	GGTACC	1 cut(s)	1221
AccB1I	GGYRCC	1 cut(s)	1221
AccB7I	CCANNNNNTGG	2 cut(s)	773, 839
AciI	CCGC	1 cut(s)	1406
AclWI	GGATC	1 cut(s)	1240
AcsI	RAATTY	3 cut(s)	65, 977, 1430
AcuI	CTGAAG	1 cut(s)	209
AcyI	GRCGYC	1 cut(s)	87
AfaI	GTAC	3 cut(s)	819, 1171, 1223
AfiI	CCNNNNNNNGG	3 cut(s)	47, 773, 839
AflIII	ACRYGT	1 cut(s)	1385
AgsI	TTSAA	5 cut(s)	143, 402, 977, 982, 1163
AjiI	CACGTC	1 cut(s)	1367
AjnI	CCWGG	2 cut(s)	772, 997
AluBI	AGCT	8 cut(s)	81, 129, 187, 563, 761, 1042, 1055, 1427
AluI	AGCT	8 cut(s)	81, 129, 187, 563, 761, 1042, 1055, 1427
Alw21I	GWGCWC	2 cut(s)	99, 115
Alw26I	GTCTC	2 cut(s)	573, 1456
AlwI	GGATC	1 cut(s)	1240
AlwNI	CAGNNNCTG	3 cut(s)	773, 839, 928
AoxI	GGCC	3 cut(s)	449, 537, 1296
ApeKI	GCWGC	6 cut(s)	473, 560, 761, 1321, 1332, 1424
ApoI	RAATTY	3 cut(s)	65, 977, 1430
Asp718I	GGTACC	1 cut(s)	1221
AspLEI	GCGC	1 cut(s)	496
AspS9I	GGNCC	2 cut(s)	172, 538
AsuC2I	CCSGG	1 cut(s)	541
AsuHPI	GGTGA	4 cut(s)	1013, 1114, 1261, 1295
AvaII	GGWCC	1 cut(s)	172
BaeI	ACNNNNGTAYC	2 cut(s)	1161, 1194
BanI	GGYRCC	1 cut(s)	1221
BbsI	GAAGAC	2 cut(s)	390, 466
Bbv12I	GWGCWC	2 cut(s)	99, 115
BbvI	GCAGC	6 cut(s)	485, 572, 748, 1319, 1333, 1436
BccI	CCATC	8 cut(s)	48, 441, 529, 698, 1099, 1240, 1274, 1285
BceAI	ACGGC	1 cut(s)	633
BcgI	CGANNNNNNTGC	2 cut(s)	1146, 1180
BciT130I	CCWGG	2 cut(s)	774, 999
BciVI	GTATCC	1 cut(s)	1066
BcnI	CCSGG	1 cut(s)	541
BcoDI	GTCTC	2 cut(s)	573, 1456
BfaI	CTAG	3 cut(s)	464, 564, 848
BfmI	CTRYAG	4 cut(s)	208, 324, 1269, 1422
BfuAI	ACCTGC	3 cut(s)	331, 358, 1429
BfuI	GTATCC	1 cut(s)	1066
BglII	AGATCT	1 cut(s)	247
BisI	GCNGC	6 cut(s)	474, 561, 762, 1322, 1333, 1425
BlsI	GCNGC	6 cut(s)	475, 562, 763, 1323, 1334, 1426
Bme1390I	CCNGG	3 cut(s)	541, 774, 999
Bme18I	GGWCC	1 cut(s)	172
BmgBI	CACGTC	1 cut(s)	1367
BmgT120I	GGNCC	2 cut(s)	172, 538
BmiI	GGNNCC	1 cut(s)	1223
BmrFI	CCNGG	3 cut(s)	541, 774, 999
BmsI	GCATC	5 cut(s)	46, 547, 726, 1015, 1339
BpiI	GAAGAC	2 cut(s)	390, 466
BpmI	CTGGAG	3 cut(s)	750, 981, 1173
BpuEI	CTTGAG	1 cut(s)	137
BpuMI	CCSGG	1 cut(s)	541
BsaBI	GATNNNNATC	1 cut(s)	1109
BsaHI	GRCGYC	1 cut(s)	87
BsaJI	CCNNGG	4 cut(s)	19, 41, 73, 1225
Bsc4I	CCNNNNNNNGG	3 cut(s)	47, 773, 839
Bse1I	ACTGG	3 cut(s)	175, 767, 1026
Bse3DI	GCAATG	1 cut(s)	1071
Bse8I	GATNNNNATC	1 cut(s)	1109
BseBI	CCWGG	2 cut(s)	774, 999
BseDI	CCNNGG	4 cut(s)	19, 41, 73, 1225
BseGI	GGATG	8 cut(s)	37, 150, 540, 916, 1030, 1251, 1296, 1354
BseJI	GATNNNNATC	1 cut(s)	1109
BseLI	CCNNNNNNNGG	3 cut(s)	47, 773, 839
BseMI	GCAATG	1 cut(s)	1071
BseMII	CTCAG	4 cut(s)	139, 268, 717, 1047
BseNI	ACTGG	3 cut(s)	175, 767, 1026
BseXI	GCAGC	6 cut(s)	485, 572, 748, 1319, 1333, 1436
BsgI	GTGCAG	1 cut(s)	273
BshFI	GGCC	3 cut(s)	451, 539, 1298
BshNI	GGYRCC	1 cut(s)	1221
BsiHKAI	GWGCWC	2 cut(s)	99, 115
BsiSI	CCGG	1 cut(s)	541
BslFI	GGGAC	1 cut(s)	1346
BslI	CCNNNNNNNGG	3 cut(s)	47, 773, 839
BsmAI	GTCTC	2 cut(s)	573, 1456
BsmFI	GGGAC	1 cut(s)	1346
BsmI	GAATGC	2 cut(s)	346, 496
BsnI	GGCC	3 cut(s)	451, 539, 1298
Bsp1286I	GDGCHC	2 cut(s)	99, 115
Bsp143I	GATC	5 cut(s)	147, 247, 372, 694, 1232
Bsp19I	CCATGG	2 cut(s)	19, 73
BspACI	CCGC	1 cut(s)	1406
BspANI	GGCC	3 cut(s)	451, 539, 1298
BspCNI	CTCAG	4 cut(s)	138, 267, 718, 1048
BspHI	TCATGA	1 cut(s)	691
BspLI	GGNNCC	1 cut(s)	1223
BspMAI	CTGCAG	2 cut(s)	328, 1426
BspMI	ACCTGC	3 cut(s)	331, 358, 1429
BspPI	GGATC	1 cut(s)	1240
BspQI	GCTCTTC	1 cut(s)	177
BspT107I	GGYRCC	1 cut(s)	1221
BsrDI	GCAATG	1 cut(s)	1071
BsrI	ACTGG	3 cut(s)	175, 767, 1026
BssECI	CCNNGG	4 cut(s)	19, 41, 73, 1225
BssMI	GATC	5 cut(s)	147, 247, 372, 694, 1232
BssNI	GRCGYC	1 cut(s)	87
BssT1I	CCWWGG	4 cut(s)	19, 41, 73, 1225
Bst2UI	CCWGG	2 cut(s)	774, 999
Bst4CI	ACNGT	9 cut(s)	231, 424, 688, 791, 822, 1033, 1095, 1215, 1439
Bst6I	CTCTTC	1 cut(s)	177
BstACI	GRCGYC	1 cut(s)	87
BstAPI	GCANNNNNTGC	3 cut(s)	323, 350, 550
BstC8I	GCNNGC	3 cut(s)	14, 280, 453
BstDEI	CTNAG	5 cut(s)	125, 254, 726, 879, 1056
BstDSI	CCRYGG	2 cut(s)	19, 73
BstF5I	GGATG	8 cut(s)	37, 150, 540, 916, 1030, 1251, 1296, 1354
BstHHI	GCGC	1 cut(s)	496
BstKTI	GATC	5 cut(s)	150, 250, 375, 697, 1235
BstMAI	GTCTC	2 cut(s)	573, 1456
BstMBI	GATC	5 cut(s)	147, 247, 372, 694, 1232
BstMWI	GCNNNNNNNGC	6 cut(s)	78, 323, 350, 550, 863, 1061
BstNI	CCWGG	2 cut(s)	774, 999
BstNSI	RCATGY	2 cut(s)	818, 1389
BstSCI	CCNGG	3 cut(s)	539, 772, 997
BstSFI	CTRYAG	4 cut(s)	208, 324, 1269, 1422
BstV1I	GCAGC	6 cut(s)	485, 572, 748, 1319, 1333, 1436
BstV2I	GAAGAC	2 cut(s)	390, 466
BstX2I	RGATCY	1 cut(s)	247
BstYI	RGATCY	1 cut(s)	247
BsuI	GTATCC	1 cut(s)	1066
BsuRI	GGCC	3 cut(s)	451, 539, 1298
BtgI	CCRYGG	2 cut(s)	19, 73
BtrI	CACGTC	1 cut(s)	1367
BtsCI	GGATG	8 cut(s)	37, 150, 540, 916, 1030, 1251, 1296, 1354
BtsI	GCAGTG	1 cut(s)	1443
BtsIMutI	CAGTG	5 cut(s)	611, 660, 796, 1019, 1443
BveI	ACCTGC	3 cut(s)	331, 358, 1429
Cac8I	GCNNGC	3 cut(s)	14, 280, 453
CaiI	CAGNNNCTG	3 cut(s)	773, 839, 928
CciI	TCATGA	1 cut(s)	691
CfoI	GCGC	1 cut(s)	496
Cfr13I	GGNCC	2 cut(s)	172, 538
CseI	GACGC	1 cut(s)	76
Csp6I	GTAC	3 cut(s)	818, 1170, 1222
CviAII	CATG	8 cut(s)	20, 74, 169, 436, 692, 815, 1242, 1386
CviQI	GTAC	3 cut(s)	818, 1170, 1222
DdeI	CTNAG	5 cut(s)	125, 254, 726, 879, 1056
DpnI	GATC	5 cut(s)	149, 249, 374, 696, 1234
DpnII	GATC	5 cut(s)	147, 247, 372, 694, 1232
Eam1104I	CTCTTC	1 cut(s)	177
EarI	CTCTTC	1 cut(s)	177
EciI	GGCGGA	1 cut(s)	1395
Eco130I	CCWWGG	4 cut(s)	19, 41, 73, 1225
Eco32I	GATATC	1 cut(s)	830
Eco47I	GGWCC	1 cut(s)	172
Eco57I	CTGAAG	1 cut(s)	209
EcoRI	GAATTC	1 cut(s)	977
EcoRII	CCWGG	2 cut(s)	772, 997
EcoRV	GATATC	1 cut(s)	830
EcoT14I	CCWWGG	4 cut(s)	19, 41, 73, 1225
ErhI	CCWWGG	4 cut(s)	19, 41, 73, 1225
FaeI	CATG	8 cut(s)	23, 77, 172, 439, 695, 818, 1245, 1389
FalI	AAGNNNNNCTT	4 cut(s)	266, 298, 723, 755
FaqI	GGGAC	1 cut(s)	1346
FatI	CATG	8 cut(s)	19, 73, 168, 435, 691, 814, 1241, 1385
Fnu4HI	GCNGC	6 cut(s)	474, 561, 762, 1322, 1333, 1425
FokI	GGATG	8 cut(s)	24, 137, 547, 923, 1037, 1258, 1303, 1361
Fsp4HI	GCNGC	6 cut(s)	474, 561, 762, 1322, 1333, 1425
FspBI	CTAG	3 cut(s)	464, 564, 848
GlaI	GCGC	1 cut(s)	495
GluI	GCNGC	6 cut(s)	474, 561, 762, 1322, 1333, 1425
GsuI	CTGGAG	3 cut(s)	750, 981, 1173
HaeIII	GGCC	3 cut(s)	451, 539, 1298
HapII	CCGG	1 cut(s)	541
HgaI	GACGC	1 cut(s)	76
HhaI	GCGC	1 cut(s)	496
Hin1I	GRCGYC	1 cut(s)	87
Hin1II	CATG	8 cut(s)	23, 77, 172, 439, 695, 818, 1245, 1389
Hin6I	GCGC	1 cut(s)	494
HinP1I	GCGC	1 cut(s)	494
HindIII	AAGCTT	1 cut(s)	79
HinfI	GANTC	6 cut(s)	121, 362, 634, 658, 836, 1127
HpaII	CCGG	1 cut(s)	541
HphI	GGTGA	4 cut(s)	1013, 1114, 1261, 1295
Hpy166II	GTNNAC	1 cut(s)	787
Hpy188I	TCNGA	6 cut(s)	257, 384, 672, 721, 1132, 1237
Hpy188III	TCNNGA	6 cut(s)	692, 833, 840, 982, 1152, 1454
Hpy8I	GTNNAC	1 cut(s)	787
HpyAV	CCTTC	1 cut(s)	508
HpyCH4III	ACNGT	9 cut(s)	231, 424, 688, 791, 822, 1033, 1095, 1215, 1439
HpyCH4IV	ACGT	2 cut(s)	1366, 1392
HpyF10VI	GCNNNNNNNGC	6 cut(s)	78, 323, 350, 550, 863, 1061
HpyF3I	CTNAG	5 cut(s)	125, 254, 726, 879, 1056
HpySE526I	ACGT	2 cut(s)	1366, 1392
Hsp92I	GRCGYC	1 cut(s)	87
Hsp92II	CATG	8 cut(s)	23, 77, 172, 439, 695, 818, 1245, 1389
HspAI	GCGC	1 cut(s)	494
KpnI	GGTACC	1 cut(s)	1225
Kzo9I	GATC	5 cut(s)	147, 247, 372, 694, 1232
LguI	GCTCTTC	1 cut(s)	177
LmnI	GCTCC	3 cut(s)	21, 769, 1154
Lsp1109I	GCAGC	6 cut(s)	485, 572, 748, 1319, 1333, 1436
LweI	GCATC	5 cut(s)	46, 547, 726, 1015, 1339
MaeI	CTAG	3 cut(s)	464, 564, 848
MaeII	ACGT	2 cut(s)	1366, 1392
MaeIII	GTNAC	6 cut(s)	59, 164, 203, 235, 924, 1388
MalI	GATC	5 cut(s)	149, 249, 374, 696, 1234
MboI	GATC	5 cut(s)	147, 247, 372, 694, 1232
MboII	GAAGA	5 cut(s)	194, 202, 242, 390, 471
MflI	RGATCY	1 cut(s)	247
MhlI	GDGCHC	2 cut(s)	99, 115
MluCI	AATT	6 cut(s)	65, 195, 777, 972, 977, 1430
MmeI	TCCRAC	4 cut(s)	573, 686, 1015, 1159
MseI	TTAA	3 cut(s)	134, 369, 699
MslI	CAYNNNNRTG	2 cut(s)	102, 1244
MspA1I	CMGCKG	1 cut(s)	761
MspI	CCGG	1 cut(s)	541
MspR9I	CCNGG	3 cut(s)	541, 774, 999
Mva1269I	GAATGC	2 cut(s)	346, 496
MvaI	CCWGG	2 cut(s)	774, 999
MwoI	GCNNNNNNNGC	6 cut(s)	78, 323, 350, 550, 863, 1061
NciI	CCSGG	1 cut(s)	541
NcoI	CCATGG	2 cut(s)	19, 73
NdeII	GATC	5 cut(s)	147, 247, 372, 694, 1232
NlaIII	CATG	8 cut(s)	23, 77, 172, 439, 695, 818, 1245, 1389
NlaIV	GGNNCC	1 cut(s)	1223
NmuCI	GTSAC	1 cut(s)	164
NspI	RCATGY	2 cut(s)	818, 1389
PagI	TCATGA	1 cut(s)	691
PciI	ACATGT	1 cut(s)	1385
PciSI	GCTCTTC	1 cut(s)	177
PctI	GAATGC	2 cut(s)	346, 496
PfeI	GAWTC	6 cut(s)	121, 362, 634, 658, 836, 1127
PflMI	CCANNNNNTGG	2 cut(s)	773, 839
PfoI	TCCNGGA	1 cut(s)	772
PkrI	GCNGC	6 cut(s)	475, 562, 763, 1323, 1334, 1426
PscI	ACATGT	1 cut(s)	1385
Psp6I	CCWGG	2 cut(s)	772, 997
PspGI	CCWGG	2 cut(s)	772, 997
PspN4I	GGNNCC	1 cut(s)	1223
PspPI	GGNCC	2 cut(s)	172, 538
PstI	CTGCAG	2 cut(s)	328, 1426
PstNI	CAGNNNCTG	3 cut(s)	773, 839, 928
PsuI	RGATCY	1 cut(s)	247
PvuII	CAGCTG	1 cut(s)	761
RsaI	GTAC	3 cut(s)	819, 1171, 1223
RsaNI	GTAC	3 cut(s)	818, 1170, 1222
RseI	CAYNNNNRTG	2 cut(s)	102, 1244
SapI	GCTCTTC	1 cut(s)	177
SaqAI	TTAA	3 cut(s)	134, 369, 699
SatI	GCNGC	6 cut(s)	474, 561, 762, 1322, 1333, 1425
Sau3AI	GATC	5 cut(s)	147, 247, 372, 694, 1232
Sau96I	GGNCC	2 cut(s)	172, 538
ScrFI	CCNGG	3 cut(s)	541, 774, 999
SduI	GDGCHC	2 cut(s)	99, 115
SfaNI	GCATC	5 cut(s)	46, 547, 726, 1015, 1339
SfcI	CTRYAG	4 cut(s)	208, 324, 1269, 1422
SinI	GGWCC	1 cut(s)	172
SmiMI	CAYNNNNRTG	2 cut(s)	102, 1244
SmlI	CTYRAG	1 cut(s)	116
SmoI	CTYRAG	1 cut(s)	116
Sse9I	AATT	6 cut(s)	65, 195, 777, 972, 977, 1430
SsiI	CCGC	1 cut(s)	1406
SspMI	CTAG	3 cut(s)	464, 564, 848
StyD4I	CCNGG	3 cut(s)	539, 772, 997
StyI	CCWWGG	4 cut(s)	19, 41, 73, 1225
TaaI	ACNGT	9 cut(s)	231, 424, 688, 791, 822, 1033, 1095, 1215, 1439
TaiI	ACGT	2 cut(s)	1369, 1395
TasI	AATT	6 cut(s)	65, 195, 777, 972, 977, 1430
TatI	WGTACW	1 cut(s)	817
TfiI	GAWTC	6 cut(s)	121, 362, 634, 658, 836, 1127
Tru1I	TTAA	3 cut(s)	134, 369, 699
Tru9I	TTAA	3 cut(s)	134, 369, 699
TscAI	CASTG	5 cut(s)	618, 660, 796, 1026, 1450
TseFI	GTSAC	1 cut(s)	164
TseI	GCWGC	6 cut(s)	473, 560, 761, 1321, 1332, 1424
Tsp45I	GTSAC	1 cut(s)	164
TspDTI	ATGAA	5 cut(s)	120, 195, 680, 1363, 1371
TspGWI	ACGGA	1 cut(s)	355
TspRI	CASTG	5 cut(s)	618, 660, 796, 1026, 1450
Van91I	CCANNNNNTGG	2 cut(s)	773, 839
VpaK11BI	GGWCC	1 cut(s)	172
XapI	RAATTY	3 cut(s)	65, 977, 1430
XceI	RCATGY	2 cut(s)	818, 1389
XcmI	CCANNNNNNNNNTGG	3 cut(s)	80, 673, 1450
XspI	CTAG	3 cut(s)	464, 564, 848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.