Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0003701

Physical Location & Seq

Genomic Coordinates Forward (+)

69370358 .. 69372243

Gene Structure 1886 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00132350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGATCACGGAATGGGCGAAGCTGTAACCCAAACCCAAGGGGGGAGGTCTGTATCCGGATCAGATCAAATCGTGCCCAGGGAGTGGAGTGTATCCACCGGGGAGTACCTGGCTCTTCCATCAAGGACGTCAACTGTGAAGGAAATCATGTATGAACTGAAGAATTCTGATGCCCACAGGATCGTGGTATGGGGACCTACAGGTGCGGGTAAAACTCTACTTGCCAAAGAAGTTTATAGGCAAGCTAGAAAAGATAAAAAGTTATTTGATAATGTGGTTATCCTCCTAGATGTCAAGAAAAATCCAGATCTGGAAGTAATTCAAAGCAAGATTGTTCGTCAGTTAGATATGAAGATTCTTGACGATGAGAATTTAGATGGAAGAGCAAGTCGTCTACGTGCCAGGATACTAGACAAGAAGATTCTTGTGTTTCTGGATGCTGTTTGGGAACAAATTGACTTGGATGCTCTGGGACTTCCTAATGTCCCCACTTGTAAGATATTGCTGACATCAAAAACACCCTTCTCTGGTACAAAAACGAGGAACTTCGAGCTCAGCCATTTAGATGACGAAGAGGCTTGCTTCCTATTTGGGAAGAGGATAGGTGATGATGTTAAAGAAGCAGTTGATATACGAAATGTAGCAACTCGAGTTAATTATAGATTTGGAGGTTTGCCCATCTTAATTGTCATAGTTGCAAGCACTTTGAAGAGAATATCTACTTTAACTTCGTGGGAAAATGCTTTGAGATGCCTAGCACGAGGCCCACAAGTGGGGATACAGTGGAGTTACAATCAATTGAATGATGAGGAAGTGAAGCAGTTATTCTTGCTATGTGGATTTGCAATATGGGGAAAAGATATTTATTTGTCAGCCTTGTTGAAATTTAGTATGGGTTTGGGCCTCTTCCGTAAGGCATACACAATGGAGCAAGCAAAAGATGCATTTCAATCATCGGTTGAAAAACTCAAGGATTTTTATCTACTGACAGACAGTGATGATGATAACAGATATGTCAGAATGCATGACCTTGTACGCTATGTTGCTAAGCGGATTGCAATCCTAGATGGACACATCTTGTCATCGGTGGGAAATATGTATGACTATGAGTACTTCAAAAAGTGCAGTATGATATCTTCACAATACAGTACAGTTCCCGTGCTTTCTGAAGTAACTATGATAAACCCAAAATTAAAAATGCTTTATTTGCACGGTAAAGGTGATAACTCGGTGGTGATGCCATCCAACTTTTTTAGGGAGATTCAGAAACTCAAAATGTTGGATTTATCCAGACTGCATTTGCTGTCACTACCTTCATCTCTTCAGTTCCTGAAAAATATGCATGCCTTATTTTTAAATCAATGCACCTTGGGAGACGTTTCTTTAGTTGGGCAGCTAAGTAACTTAGAAATTCTCAGCTTTTCTCAGTCCAGTGTCAAACAATTGTCTAAAGGAATAGGGCATTTGACTCGTCTTCGGTTGTTGGATTTATCTGATTGCTCTGAACTTGAAGTTATTTCACCTAATGTCATATCAAGCTTGGAGAGACTAGAAGACTTGAGAATGAGAAACAGCTTTAACAAGTGGGAGGTTGAAGGTAAAAGAAGCAACGCAAGCCTTTCTGAGCTGAAGTATTTGTCTCAGTTATCTGTATTACACATACATATTCTGAATGCTGACATTCTTCCAGCAAACTTGTTCTCGCGCAAGTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LRR_8 NB-ARC

Protein Analysis

571

Amino Acids

64.67

Weight (kDa)

8.79

Isoelectric Point (pI)

37.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	44 - 199	1.7e-16	NB-ARC domain
LRR_14	PF23598	463 - 556	3.9e-08	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003701)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0085081 RchiOBHm_Chr2g0111441 RchiOBHm_Chr7g0202501 RchiOBHm_Chr7g0203351 RchiOBHm_Chr7g0236751 RchiOBHm_Chr7g0236761
rosa_laevigata	RLG00000003593 RLG00000003598
rosa_multiflora	Rmu_co8454035.1_g000001 Rmu_sc0001389.1_g000006 Rmu_sc0009832.1_g000003 Rmu_sc0013542.1_g000001
rosa_roxburghii	Rroxscaffold_2G00132350 Rroxscaffold_2G00132380 Rroxscaffold_3G00224900 Rroxscaffold_3G00254560
rosa_rugosa	Rorug02G0174000 Rorug02G0174100 Rorug02G0174100
rosa_samantha	Rh2AG226800 Rh2BG238600 Rh2CG230700 Rh2DG007300 Rh2DG234400 Rh2DG235400 Rh7AG198500 Rh7AG454300 Rh7BG199800 Rh7BG425300 Rh7BG425400 Rh7CG210000 Rh7DG205400 Rh7DG441800 Rh7DG441900
rosa_wichuraiana	Rw7G017420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1714
AatII	GACGTC	1 cut(s)	131
AccB7I	CCANNNNNTGG	1 cut(s)	84
AccI	GTMKAC	1 cut(s)	394
AccII	CGCG	1 cut(s)	1705
AccIII	TCCGGA	1 cut(s)	56
AciI	CCGC	2 cut(s)	206, 1051
AclWI	GGATC	3 cut(s)	12, 67, 188
AcsI	RAATTY	4 cut(s)	163, 370, 884, 1410
AcuI	CTGAAG	4 cut(s)	179, 1188, 1307, 1649
AcyI	GRCGYC	1 cut(s)	128
AfaI	GTAC	5 cut(s)	107, 532, 1035, 1112, 1150
AfiI	CCNNNNNNNGG	5 cut(s)	42, 84, 527, 772, 773
AgsI	TTSAA	9 cut(s)	323, 709, 802, 883, 950, 962, 1117, 1511, 1595
AjnI	CCWGG	3 cut(s)	77, 108, 401
AluBI	AGCT	8 cut(s)	23, 245, 553, 1396, 1419, 1539, 1575, 1627
AluI	AGCT	8 cut(s)	23, 245, 553, 1396, 1419, 1539, 1575, 1627
Alw21I	GWGCWC	1 cut(s)	555
Alw26I	GTCTC	3 cut(s)	1368, 1540, 1644
AlwI	GGATC	3 cut(s)	12, 67, 188
AlwNI	CAGNNNCTG	1 cut(s)	1330
Ama87I	CYCGRG	1 cut(s)	648
Aor13HI	TCCGGA	1 cut(s)	56
AoxI	GGCC	2 cut(s)	763, 901
ApeKI	GCWGC	1 cut(s)	1393
ApoI	RAATTY	4 cut(s)	163, 370, 884, 1410
Asp700I	GAANNNNTTC	1 cut(s)	318
AspLEI	GCGC	1 cut(s)	1707
AspS9I	GGNCC	3 cut(s)	194, 764, 901
AsuC2I	CCSGG	1 cut(s)	100
AsuHPI	GGTGA	4 cut(s)	617, 1232, 1246, 1512
AvaI	CYCGRG	1 cut(s)	648
AvaII	GGWCC	1 cut(s)	194
BaeGI	GKGCMC	1 cut(s)	78
BanII	GRGCYC	1 cut(s)	555
BarI	GAAGNNNNNNTAC	2 cut(s)	1120, 1152
BauI	CACGAG	1 cut(s)	759
BbsI	GAAGAC	2 cut(s)	1466, 1560
Bbv12I	GWGCWC	1 cut(s)	555
BbvI	GCAGC	1 cut(s)	1405
BccI	CCATC	5 cut(s)	127, 371, 686, 1061, 1249
BcgI	CGANNNNNNTGC	2 cut(s)	1451, 1485
BciT130I	CCWGG	3 cut(s)	79, 110, 403
BciVI	GTATCC	4 cut(s)	64, 103, 399, 771
BcnI	CCSGG	1 cut(s)	100
BcoDI	GTCTC	3 cut(s)	1368, 1540, 1644
BfaI	CTAG	6 cut(s)	246, 287, 410, 755, 1064, 1550
BfmI	CTRYAG	1 cut(s)	198
BfuI	GTATCC	4 cut(s)	64, 103, 399, 771
BglII	AGATCT	1 cut(s)	307
BisI	GCNGC	1 cut(s)	1394
BlpI	GCTNAGC	2 cut(s)	554, 1047
BlsI	GCNGC	1 cut(s)	1395
BmcAI	AGTACT	1 cut(s)	1112
Bme1390I	CCNGG	4 cut(s)	79, 100, 110, 403
Bme18I	GGWCC	1 cut(s)	194
BmeT110I	CYCGRG	1 cut(s)	648
BmgT120I	GGNCC	3 cut(s)	194, 764, 901
BmiI	GGNNCC	1 cut(s)	195
BmrFI	CCNGG	4 cut(s)	79, 100, 110, 403
BmsI	GCATC	6 cut(s)	160, 427, 454, 740, 931, 1227
BpiI	GAAGAC	2 cut(s)	1466, 1560
Bpu1102I	GCTNAGC	2 cut(s)	554, 1047
BpuEI	CTTGAG	2 cut(s)	953, 1579
BpuMI	CCSGG	1 cut(s)	100
BsaAI	YACGTR	1 cut(s)	398
BsaBI	GATNNNNATC	2 cut(s)	978, 1058
BsaHI	GRCGYC	1 cut(s)	128
BsaJI	CCNNGG	5 cut(s)	37, 77, 78, 99, 1368
BsaWI	WCCGGW	1 cut(s)	56
Bsc4I	CCNNNNNNNGG	5 cut(s)	42, 84, 527, 772, 773
Bse1I	ACTGG	1 cut(s)	1431
Bse8I	GATNNNNATC	2 cut(s)	978, 1058
BseAI	TCCGGA	1 cut(s)	56
BseBI	CCWGG	3 cut(s)	79, 110, 403
BseDI	CCNNGG	5 cut(s)	37, 77, 78, 99, 1368
BseGI	GGATG	3 cut(s)	442, 469, 1241
BseJI	GATNNNNATC	2 cut(s)	978, 1058
BseLI	CCNNNNNNNGG	5 cut(s)	42, 84, 527, 772, 773
BseMII	CTCAG	5 cut(s)	568, 1429, 1439, 1614, 1655
BseNI	ACTGG	1 cut(s)	1431
BseSI	GKGCMC	1 cut(s)	78
BseXI	GCAGC	1 cut(s)	1405
BsgI	GTGCAG	1 cut(s)	1144
Bsh1236I	CGCG	1 cut(s)	1705
BshFI	GGCC	2 cut(s)	765, 903
BsiHKAI	GWGCWC	1 cut(s)	555
BsiHKCI	CYCGRG	1 cut(s)	648
BsiSI	CCGG	2 cut(s)	57, 99
BslFI	GGGAC	3 cut(s)	207, 470, 486
BslI	CCNNNNNNNGG	5 cut(s)	42, 84, 527, 772, 773
BsmAI	GTCTC	3 cut(s)	1368, 1540, 1644
BsmBI	CGTCTC	1 cut(s)	1368
BsmFI	GGGAC	3 cut(s)	207, 470, 486
BsmI	GAATGC	2 cut(s)	1026, 1678
BsnI	GGCC	2 cut(s)	765, 903
BsoBI	CYCGRG	1 cut(s)	648
Bsp1286I	GDGCHC	2 cut(s)	78, 555
Bsp13I	TCCGGA	1 cut(s)	56
Bsp143I	GATC	5 cut(s)	4, 59, 64, 180, 307
Bsp1720I	GCTNAGC	2 cut(s)	554, 1047
BspACI	CCGC	2 cut(s)	206, 1051
BspANI	GGCC	2 cut(s)	765, 903
BspCNI	CTCAG	5 cut(s)	567, 1428, 1438, 1615, 1654
BspEI	TCCGGA	1 cut(s)	56
BspFNI	CGCG	1 cut(s)	1705
BspLI	GGNNCC	1 cut(s)	195
BspPI	GGATC	3 cut(s)	12, 67, 188
BspQI	GCTCTTC	2 cut(s)	120, 376
BsrI	ACTGG	1 cut(s)	1431
BssECI	CCNNGG	5 cut(s)	37, 77, 78, 99, 1368
BssMI	GATC	5 cut(s)	4, 59, 64, 180, 307
BssNI	GRCGYC	1 cut(s)	128
BssSI	CACGAG	1 cut(s)	759
BssT1I	CCWWGG	2 cut(s)	37, 1368
Bst2BI	CACGAG	1 cut(s)	759
Bst2UI	CCWGG	3 cut(s)	79, 110, 403
Bst4CI	ACNGT	6 cut(s)	136, 783, 995, 1148, 1153, 1214
Bst6I	CTCTTC	7 cut(s)	120, 376, 567, 590, 704, 911, 1326
BstACI	GRCGYC	1 cut(s)	128
BstAPI	GCANNNNNTGC	1 cut(s)	941
BstBAI	YACGTR	1 cut(s)	398
BstC8I	GCNNGC	6 cut(s)	243, 580, 700, 933, 1344, 1615
BstDEI	CTNAG	8 cut(s)	554, 1047, 1397, 1405, 1415, 1425, 1623, 1641
BstF5I	GGATG	3 cut(s)	442, 469, 1241
BstFNI	CGCG	1 cut(s)	1705
BstHHI	GCGC	1 cut(s)	1707
BstKTI	GATC	5 cut(s)	7, 62, 67, 183, 310
BstMAI	GTCTC	3 cut(s)	1368, 1540, 1644
BstMBI	GATC	5 cut(s)	4, 59, 64, 180, 307
BstMWI	GCNNNNNNNGC	3 cut(s)	941, 1207, 1614
BstNI	CCWGG	3 cut(s)	79, 110, 403
BstNSI	RCATGY	1 cut(s)	1346
BstSCI	CCNGG	4 cut(s)	77, 98, 108, 401
BstSFI	CTRYAG	1 cut(s)	198
BstSLI	GKGCMC	1 cut(s)	78
BstUI	CGCG	1 cut(s)	1705
BstV1I	GCAGC	1 cut(s)	1405
BstV2I	GAAGAC	2 cut(s)	1466, 1560
BstX2I	RGATCY	1 cut(s)	307
BstYI	RGATCY	1 cut(s)	307
BsuI	GTATCC	4 cut(s)	64, 103, 399, 771
BsuRI	GGCC	2 cut(s)	765, 903
BtsCI	GGATG	3 cut(s)	442, 469, 1241
BtsIMutI	CAGTG	3 cut(s)	788, 1000, 1438
Cac8I	GCNNGC	6 cut(s)	243, 580, 700, 933, 1344, 1615
CaiI	CAGNNNCTG	1 cut(s)	1330
CfoI	GCGC	1 cut(s)	1707
Cfr13I	GGNCC	3 cut(s)	194, 764, 901
Csp6I	GTAC	5 cut(s)	106, 531, 1034, 1111, 1149
CviAII	CATG	3 cut(s)	148, 1025, 1343
CviQI	GTAC	5 cut(s)	106, 531, 1034, 1111, 1149
DdeI	CTNAG	8 cut(s)	554, 1047, 1397, 1405, 1415, 1425, 1623, 1641
DpnI	GATC	5 cut(s)	6, 61, 66, 182, 309
DpnII	GATC	5 cut(s)	4, 59, 64, 180, 307
DraI	TTTAAA	1 cut(s)	1356
Eam1104I	CTCTTC	7 cut(s)	120, 376, 567, 590, 704, 911, 1326
EarI	CTCTTC	7 cut(s)	120, 376, 567, 590, 704, 911, 1326
Ecl136II	GAGCTC	1 cut(s)	553
Eco130I	CCWWGG	2 cut(s)	37, 1368
Eco24I	GRGCYC	1 cut(s)	555
Eco32I	GATATC	1 cut(s)	1134
Eco47I	GGWCC	1 cut(s)	194
Eco53kI	GAGCTC	1 cut(s)	553
Eco57I	CTGAAG	4 cut(s)	179, 1188, 1307, 1649
Eco88I	CYCGRG	1 cut(s)	648
EcoICRI	GAGCTC	1 cut(s)	553
EcoO109I	RGGNCCY	1 cut(s)	194
EcoRI	GAATTC	1 cut(s)	163
EcoRII	CCWGG	3 cut(s)	77, 108, 401
EcoRV	GATATC	1 cut(s)	1134
EcoT14I	CCWWGG	2 cut(s)	37, 1368
EcoT22I	ATGCAT	3 cut(s)	946, 1026, 1344
EcoT38I	GRGCYC	1 cut(s)	555
ErhI	CCWWGG	2 cut(s)	37, 1368
Esp3I	CGTCTC	1 cut(s)	1368
FaeI	CATG	3 cut(s)	151, 1028, 1346
FaqI	GGGAC	3 cut(s)	207, 470, 486
FatI	CATG	3 cut(s)	147, 1024, 1342
FauI	CCCGC	1 cut(s)	199
FblI	GTMKAC	1 cut(s)	394
Fnu4HI	GCNGC	1 cut(s)	1394
FokI	GGATG	3 cut(s)	449, 476, 1228
FriOI	GRGCYC	1 cut(s)	555
Fsp4HI	GCNGC	1 cut(s)	1394
FspBI	CTAG	6 cut(s)	246, 287, 410, 755, 1064, 1550
GlaI	GCGC	1 cut(s)	1706
GluI	GCNGC	1 cut(s)	1394
HaeIII	GGCC	2 cut(s)	765, 903
HapII	CCGG	2 cut(s)	57, 99
HhaI	GCGC	1 cut(s)	1707
Hin1I	GRCGYC	1 cut(s)	128
Hin1II	CATG	3 cut(s)	151, 1028, 1346
Hin6I	GCGC	1 cut(s)	1705
HinP1I	GCGC	1 cut(s)	1705
HincII	GTYRAC	1 cut(s)	132
HindII	GTYRAC	1 cut(s)	132
HindIII	AAGCTT	1 cut(s)	1537
HinfI	GANTC	4 cut(s)	355, 421, 1261, 1468
HpaII	CCGG	2 cut(s)	57, 99
HphI	GGTGA	4 cut(s)	617, 1232, 1246, 1512
Hpy166II	GTNNAC	2 cut(s)	132, 395
Hpy188I	TCNGA	9 cut(s)	64, 169, 1019, 1168, 1266, 1495, 1504, 1624, 1671
Hpy188III	TCNNGA	8 cut(s)	57, 295, 305, 311, 359, 434, 1290, 1330
Hpy8I	GTNNAC	2 cut(s)	132, 395
HpyAV	CCTTC	4 cut(s)	133, 532, 1323, 1589
HpyCH4III	ACNGT	6 cut(s)	136, 783, 995, 1148, 1153, 1214
HpyCH4IV	ACGT	3 cut(s)	128, 397, 1377
HpyF10VI	GCNNNNNNNGC	3 cut(s)	941, 1207, 1614
HpyF3I	CTNAG	8 cut(s)	554, 1047, 1397, 1405, 1415, 1425, 1623, 1641
HpySE526I	ACGT	3 cut(s)	128, 397, 1377
Hsp92I	GRCGYC	1 cut(s)	128
Hsp92II	CATG	3 cut(s)	151, 1028, 1346
HspAI	GCGC	1 cut(s)	1705
Kpn2I	TCCGGA	1 cut(s)	56
Kzo9I	GATC	5 cut(s)	4, 59, 64, 180, 307
LguI	GCTCTTC	2 cut(s)	120, 376
LmnI	GCTCC	1 cut(s)	928
Lsp1109I	GCAGC	1 cut(s)	1405
LweI	GCATC	6 cut(s)	160, 427, 454, 740, 931, 1227
MaeI	CTAG	6 cut(s)	246, 287, 410, 755, 1064, 1550
MaeII	ACGT	3 cut(s)	128, 397, 1377
MaeIII	GTNAC	5 cut(s)	25, 788, 1171, 1305, 1400
MalI	GATC	5 cut(s)	6, 61, 66, 182, 309
MboI	GATC	5 cut(s)	4, 59, 64, 180, 307
MfeI	CAATTG	2 cut(s)	797, 1442
MflI	RGATCY	1 cut(s)	307
MhlI	GDGCHC	2 cut(s)	78, 555
MlyI	GAGTC	1 cut(s)	1462
MmeI	TCCRAC	3 cut(s)	1260, 1269, 1464
Mph1103I	ATGCAT	3 cut(s)	946, 1026, 1344
MroI	TCCGGA	1 cut(s)	56
MroXI	GAANNNNTTC	1 cut(s)	318
MseI	TTAA	7 cut(s)	615, 654, 683, 725, 1193, 1355, 1578
MslI	CAYNNNNRTG	1 cut(s)	564
MspI	CCGG	2 cut(s)	57, 99
MspR9I	CCNGG	4 cut(s)	79, 100, 110, 403
MunI	CAATTG	2 cut(s)	797, 1442
Mva1269I	GAATGC	2 cut(s)	1026, 1678
MvaI	CCWGG	3 cut(s)	79, 110, 403
MvnI	CGCG	1 cut(s)	1705
MwoI	GCNNNNNNNGC	3 cut(s)	941, 1207, 1614
NciI	CCSGG	1 cut(s)	100
NdeII	GATC	5 cut(s)	4, 59, 64, 180, 307
NlaIII	CATG	3 cut(s)	151, 1028, 1346
NlaIV	GGNNCC	1 cut(s)	195
NmuCI	GTSAC	1 cut(s)	1305
NsiI	ATGCAT	3 cut(s)	946, 1026, 1344
NspI	RCATGY	1 cut(s)	1346
PaeI	GCATGC	1 cut(s)	1346
PaeR7I	CTCGAG	1 cut(s)	648
PasI	CCCWGGG	1 cut(s)	78
PciSI	GCTCTTC	2 cut(s)	120, 376
PcsI	WCGNNNNNNNCGW	1 cut(s)	15
PctI	GAATGC	2 cut(s)	1026, 1678
PdmI	GAANNNNTTC	1 cut(s)	318
PfeI	GAWTC	3 cut(s)	355, 421, 1261
PflMI	CCANNNNNTGG	1 cut(s)	84
PkrI	GCNGC	1 cut(s)	1395
PleI	GAGTC	1 cut(s)	1462
PpsI	GAGTC	1 cut(s)	1462
Ppu21I	YACGTR	1 cut(s)	398
PpuMI	RGGWCCY	1 cut(s)	194
PsiI	TTATAA	1 cut(s)	1714
Psp124BI	GAGCTC	1 cut(s)	555
Psp5II	RGGWCCY	1 cut(s)	194
Psp6I	CCWGG	3 cut(s)	77, 108, 401
PspGI	CCWGG	3 cut(s)	77, 108, 401
PspN4I	GGNNCC	1 cut(s)	195
PspPI	GGNCC	3 cut(s)	194, 764, 901
PspPPI	RGGWCCY	1 cut(s)	194
PspXI	VCTCGAGB	1 cut(s)	648
PstNI	CAGNNNCTG	1 cut(s)	1330
PsuI	RGATCY	1 cut(s)	307
RsaI	GTAC	5 cut(s)	107, 532, 1035, 1112, 1150
RsaNI	GTAC	5 cut(s)	106, 531, 1034, 1111, 1149
RseI	CAYNNNNRTG	1 cut(s)	564
SacI	GAGCTC	1 cut(s)	555
SapI	GCTCTTC	2 cut(s)	120, 376
SaqAI	TTAA	7 cut(s)	615, 654, 683, 725, 1193, 1355, 1578
SatI	GCNGC	1 cut(s)	1394
Sau3AI	GATC	5 cut(s)	4, 59, 64, 180, 307
Sau96I	GGNCC	3 cut(s)	194, 764, 901
ScaI	AGTACT	1 cut(s)	1112
SchI	GAGTC	1 cut(s)	1462
ScrFI	CCNGG	4 cut(s)	79, 100, 110, 403
SduI	GDGCHC	2 cut(s)	78, 555
SfaNI	GCATC	6 cut(s)	160, 427, 454, 740, 931, 1227
SfcI	CTRYAG	1 cut(s)	198
Sfr274I	CTCGAG	1 cut(s)	648
SinI	GGWCC	1 cut(s)	194
SlaI	CTCGAG	1 cut(s)	648
SmiMI	CAYNNNNRTG	1 cut(s)	564
SmlI	CTYRAG	3 cut(s)	648, 968, 1558
SmoI	CTYRAG	3 cut(s)	648, 968, 1558
SphI	GCATGC	1 cut(s)	1346
SsiI	CCGC	2 cut(s)	206, 1051
SspMI	CTAG	6 cut(s)	246, 287, 410, 755, 1064, 1550
SstI	GAGCTC	1 cut(s)	555
StyD4I	CCNGG	4 cut(s)	77, 98, 108, 401
StyI	CCWWGG	2 cut(s)	37, 1368
TaaI	ACNGT	6 cut(s)	136, 783, 995, 1148, 1153, 1214
TaiI	ACGT	3 cut(s)	131, 400, 1380
TaqI	TCGA	2 cut(s)	549, 649
TatI	WGTACW	2 cut(s)	1110, 1148
TfiI	GAWTC	3 cut(s)	355, 421, 1261
Tru1I	TTAA	7 cut(s)	615, 654, 683, 725, 1193, 1355, 1578
Tru9I	TTAA	7 cut(s)	615, 654, 683, 725, 1193, 1355, 1578
TscAI	CASTG	3 cut(s)	788, 1000, 1438
TseFI	GTSAC	1 cut(s)	1305
TseI	GCWGC	1 cut(s)	1393
Tsp45I	GTSAC	1 cut(s)	1305
TspDTI	ATGAA	3 cut(s)	168, 365, 1305
TspGWI	ACGGA	2 cut(s)	24, 899
TspRI	CASTG	3 cut(s)	788, 1000, 1438
Van91I	CCANNNNNTGG	1 cut(s)	84
VpaK11BI	GGWCC	1 cut(s)	194
XapI	RAATTY	4 cut(s)	163, 370, 884, 1410
XceI	RCATGY	1 cut(s)	1346
XhoI	CTCGAG	1 cut(s)	648
XmiI	GTMKAC	1 cut(s)	394
XmnI	GAANNNNTTC	1 cut(s)	318
XspI	CTAG	6 cut(s)	246, 287, 410, 755, 1064, 1550
ZraI	GACGTC	1 cut(s)	129
ZrmI	AGTACT	1 cut(s)	1112
Zsp2I	ATGCAT	3 cut(s)	946, 1026, 1344

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.