No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0085081 RchiOBHm_Chr2g0111441 RchiOBHm_Chr7g0202501 RchiOBHm_Chr7g0203351 RchiOBHm_Chr7g0236751 RchiOBHm_Chr7g0236761 |
| rosa_laevigata | RLG00000003593 RLG00000003598 |
| rosa_multiflora | Rmu_co8454035.1_g000001 Rmu_sc0001389.1_g000006 Rmu_sc0009832.1_g000003 Rmu_sc0013542.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00132350 Rroxscaffold_2G00132380 Rroxscaffold_3G00224900 Rroxscaffold_3G00254560 |
| rosa_rugosa | Rorug02G0174000 Rorug02G0174100 Rorug02G0174100 |
| rosa_samantha | Rh2AG226800 Rh2BG238600 Rh2CG230700 Rh2DG007300 Rh2DG234400 Rh2DG235400 Rh7AG198500 Rh7AG454300 Rh7BG199800 Rh7BG425300 Rh7BG425400 Rh7CG210000 Rh7DG205400 Rh7DG441800 Rh7DG441900 |
| rosa_wichuraiana | Rw7G017420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 96 |
| AflIII | ACRYGT | 1 cut(s) | 34 |
| AgsI | TTSAA | 2 cut(s) | 140, 152 |
| AjnI | CCWGG | 1 cut(s) | 109 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 114, 146 |
| AluBI | AGCT | 1 cut(s) | 85 |
| AluI | AGCT | 1 cut(s) | 85 |
| AoxI | GGCC | 2 cut(s) | 98, 107 |
| AspS9I | GGNCC | 2 cut(s) | 98, 199 |
| AvaII | GGWCC | 1 cut(s) | 199 |
| BauI | CACGAG | 1 cut(s) | 51 |
| BceAI | ACGGC | 1 cut(s) | 122 |
| BciT130I | CCWGG | 1 cut(s) | 111 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 106 |
| Bme1390I | CCNGG | 1 cut(s) | 111 |
| Bme18I | GGWCC | 1 cut(s) | 199 |
| BmgT120I | GGNCC | 2 cut(s) | 98, 199 |
| BmrFI | CCNGG | 1 cut(s) | 111 |
| BmsI | GCATC | 1 cut(s) | 26 |
| Bpu10I | CCTNAGC | 1 cut(s) | 81 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 42, 72, 126, 156 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 96 |
| Bse3DI | GCAATG | 1 cut(s) | 201 |
| BseBI | CCWGG | 1 cut(s) | 111 |
| BseGI | GGATG | 1 cut(s) | 69 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BseMI | GCAATG | 1 cut(s) | 201 |
| BseMII | CTCAG | 1 cut(s) | 72 |
| BshFI | GGCC | 2 cut(s) | 100, 109 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BsnI | GGCC | 2 cut(s) | 100, 109 |
| BspANI | GGCC | 2 cut(s) | 100, 109 |
| BspCNI | CTCAG | 1 cut(s) | 73 |
| BsrDI | GCAATG | 1 cut(s) | 201 |
| BssSI | CACGAG | 1 cut(s) | 51 |
| Bst2BI | CACGAG | 1 cut(s) | 51 |
| Bst2UI | CCWGG | 1 cut(s) | 111 |
| BstC8I | GCNNGC | 1 cut(s) | 186 |
| BstDEI | CTNAG | 1 cut(s) | 81 |
| BstF5I | GGATG | 1 cut(s) | 69 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 106 |
| BstNI | CCWGG | 1 cut(s) | 111 |
| BstNSI | RCATGY | 1 cut(s) | 188 |
| BstSCI | CCNGG | 1 cut(s) | 109 |
| BsuRI | GGCC | 2 cut(s) | 100, 109 |
| BtsCI | GGATG | 1 cut(s) | 69 |
| Cac8I | GCNNGC | 1 cut(s) | 186 |
| Cfr13I | GGNCC | 2 cut(s) | 98, 199 |
| CviAII | CATG | 2 cut(s) | 178, 185 |
| CviJI | RGCY | 3 cut(s) | 85, 100, 109 |
| CviKI_1 | RGCY | 3 cut(s) | 85, 100, 109 |
| DdeI | CTNAG | 1 cut(s) | 81 |
| Eco47I | GGWCC | 1 cut(s) | 199 |
| EcoRII | CCWGG | 1 cut(s) | 109 |
| FaeI | CATG | 2 cut(s) | 181, 188 |
| FaiI | YATR | 2 cut(s) | 179, 186 |
| FatI | CATG | 2 cut(s) | 177, 184 |
| FokI | GGATG | 1 cut(s) | 56 |
| HaeIII | GGCC | 2 cut(s) | 100, 109 |
| Hin1II | CATG | 2 cut(s) | 181, 188 |
| HinfI | GANTC | 1 cut(s) | 148 |
| Hpy188III | TCNNGA | 1 cut(s) | 152 |
| HpyCH4IV | ACGT | 1 cut(s) | 34 |
| HpyCH4V | TGCA | 2 cut(s) | 50, 172 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 106 |
| HpyF3I | CTNAG | 1 cut(s) | 81 |
| HpySE526I | ACGT | 1 cut(s) | 34 |
| Hsp92II | CATG | 2 cut(s) | 181, 188 |
| LpnPI | CCDG | 3 cut(s) | 93, 96, 123 |
| LweI | GCATC | 1 cut(s) | 26 |
| MaeII | ACGT | 1 cut(s) | 34 |
| MluCI | AATT | 2 cut(s) | 166, 211 |
| MmeI | TCCRAC | 1 cut(s) | 112 |
| MnlI | CCTC | 1 cut(s) | 111 |
| MseI | TTAA | 3 cut(s) | 45, 75, 214 |
| MspR9I | CCNGG | 1 cut(s) | 111 |
| MvaI | CCWGG | 1 cut(s) | 111 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 106 |
| NlaIII | CATG | 2 cut(s) | 181, 188 |
| NspI | RCATGY | 1 cut(s) | 188 |
| PaeI | GCATGC | 1 cut(s) | 188 |
| PfeI | GAWTC | 1 cut(s) | 148 |
| Psp6I | CCWGG | 1 cut(s) | 109 |
| PspGI | CCWGG | 1 cut(s) | 109 |
| PspPI | GGNCC | 2 cut(s) | 98, 199 |
| SaqAI | TTAA | 3 cut(s) | 45, 75, 214 |
| Sau96I | GGNCC | 2 cut(s) | 98, 199 |
| ScrFI | CCNGG | 1 cut(s) | 111 |
| SetI | ASST | 4 cut(s) | 37, 82, 87, 204 |
| SfaNI | GCATC | 1 cut(s) | 26 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 106 |
| SinI | GGWCC | 1 cut(s) | 199 |
| SphI | GCATGC | 1 cut(s) | 188 |
| Sse9I | AATT | 2 cut(s) | 166, 211 |
| StyD4I | CCNGG | 1 cut(s) | 109 |
| TaiI | ACGT | 1 cut(s) | 37 |
| TasI | AATT | 2 cut(s) | 166, 211 |
| TfiI | GAWTC | 1 cut(s) | 148 |
| Tru1I | TTAA | 3 cut(s) | 45, 75, 214 |
| Tru9I | TTAA | 3 cut(s) | 45, 75, 214 |
| TspDTI | ATGAA | 2 cut(s) | 135, 194 |
| VpaK11BI | GGWCC | 1 cut(s) | 199 |
| XceI | RCATGY | 1 cut(s) | 188 |