Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0003701

Physical Location & Seq

Genomic Coordinates Reverse (-)

23333719 .. 23344927

Gene Structure 11209 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG230700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2760 bp

ATGACGCGTCGGGGAATCTGGAGTACGATTTCTATTGGAACCCAAAAAAGTGAAGGCAGAGACCATTGCATACAAGGCATGGAAGCCATGGATTCAATTCTTTCAAAAATTGCCGAGTACACAGTTGAACCCGTTGGACGCCAAGTGGGTTATGTAATTCACTGCAACAGAAACCTTCACCACCTACAATATGGAGTGAGATGGTTAAAAGCTGAGAGAGACTATTTAATAACTGAGGTTGATGCGGCTGAAATAATAAATGAACGAGCTCAACCTGCTTTACAGGATTGGCTGGCAAGAGCGGAGGCGATCACTGTAATGGCAGAGGACCTTCTGAGAGATGGAAATCGAGCAAATCTGGAATGTCTCCATGGGTTTTGTCCTAATCTGAAGTACCGTTATCGGCTAGGCAGGAGATCAACAGGATTGCTGGATGAGATTGAGATGTTCCTGCACATAAAAGAAGCACTAATCTTGCAAATGGAGTGGGGTGTATCCACCGGGGAGTACCAGGCTTTTCGATCAAGGACGTCAACTGTGAGGCAAATCATGGATGAACTGAAGAAGTCTAGTGCCCGCAGGATTGGGGTGTGTGGACCTAGAGGTGTGGGTAAAACTCTACTTGGCAAAGAAGTTTATAGGCAAGCTAGAAAAGATAAAAAGTTATTTGATGATGTGGTTATCCTATTAGATGTCAAGAAAAATCCAGACCTGGAAGTAATTCAGAGCAAGATTGTTCGTCAGTTAGATATGAAGATTCTTGACGATGAGAATTTAGACGGAAGAGCAAATCATCTACATGCCAGGATACTAAACAAGAAGATTCTTGTGATTCTGGATGATGTTTGGGAACATATTGACTTGGATGCTCTGGGACTTCCTAGTGTCCCTACTTGTAAGATATTGCTGACATCTATAAGTAGAGAAGCATTATCTGATACAAAGATGCAGAAGGTGTTCGCACTCGACATTTTAACAGAAGAAGAGGCTTGGTTTCTGTTTAAGAACAAGGCAGGTGATGTTCTTAAAGAAAACGTTAATATAGTAAGTGTGGCAACTCAAGTTGCTAAAAGATGTGAAGGTTTGCCCATCTCAATTGTCATAGTTGCAAGCTCTTCGAAGGGAATATCTACTTTGACTTCATGGGAAAATGCTTTGAGATGCCTTGAAGAGTTTGATACGGATCACGGGATCACACGAAGCCCACACTTGGGGATAGAGTGGAGTTACAATCAATTGAATGATGAGGAAGTGAAGCAGTTGTTCTTGCTATGTGGATTTGCAATATGGGGAAAAGATATTTATTTGCCAGCCTTGTTGAAATTTAGTATGGGTCTGGGCCTCTTCAGTAAGGCATACACAATGGAGCAAGCAAAAGATGCATTTCAATCATCGGTTGAAAAACTCAAGGATTTTTGTCTACTGACAGACAGTGATGATGATAACAGATATGTCAGAATGCATGACCTTGTACGTGATGTTGCTAACCAGATTGCATTCCGAGATGGACACATCTTATCATCGGCAGAAGATGGGGGTGAGTATGAGTTAAAAGAATGGCTAGATAAGGATTTCTTCAAGAAGTGCAGTATGATGTCTTCACAATCCAGTACTGTTCCTGCGCTCTCTGAAGTAACCAGGATACACCCCAAATTAAAAATGCTTTATTTGCACGGTAAAGGTGATAACTCGGTGGAGATGCCATCCAACTTTTTTAGGGAGATTCAGGAACTCAAAATGTTGGATTTAACCAGACTGCATCTGCTGTCACTACCTTCATCTCTTCAGTTCCTGAAGAATATGCATGCCTTATTTTTAAATCAATGCACCTTGGGAGACGTTGCTTTAGTTGGGCAGCTAAATAACTTAGAAATTCTCAGCTTTTCTCAGTCCAGTGTCAAACAATTGCCTAAAGAAATAGGGCATTTGACTCGTCTTCGGTTGTTGGATTTATCTGATTGCTCTGAACTTGAAGTTATTTCACCCAATGTCATATCAAGCTTGGAGAGACTAGAAGACTTGAGAATGAGAAACAGCTTTAACAAGTGGGAGGCTGAAGGTAAAAGAAGCAACGCAAGCCTTTCTGAGCTGAAGTATTTGTCTCAGTTATCCGTATTACAGATACATATTCTGAATGCTGACATTCTTCCAGCAAACTTGTTCTCACGCAAGTTAGAAAGATTCAATGTTTTTATTGGGGGCGAGTGGGTTGAGAGATATACTCGAAAGACACTGCTAATGGTTGAGACGACACTCAACACACTAAAACTCAAGCCCACTACCAGCGCTGAAGGATTGGATACAGGACTAAAATTGTTGCTGAAGATAACTGAAGACTTGTCCTTGGATGGAACAGAGGGTGTCAATAAGGTGCTCGATAAATTAGATACTCAAGATTTGGAGCATTTGAAACATTTGCAAGTCCAAAACAATGTTGATATAAGATATCTCATTAACAGGGAGATAGGATTTCCAAGGCTGGAGATATTGACCTTCAATGACTTACCTAAGCTGACAACAATGTGGCACGCCCAAATTGCTCAAAACTCTTTTTGCAAACTCAGGGACGTTACAGTTCGACGATGCAATAGTCTTAAAAGCATTTGTCCAGACTCAATAATAGCTGGAGCTTTTCAGGAGCTACAAAATTTGACAGTGGAGGACTGTGCAGTGGAGGAAATAGTTGCCAAGGAAGAGGGACTACGAAAACAAAACCACGATAAGTTCTTCCCAAAGCTAGAGAGAGTGTTTGGAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LRR_8 NB-ARC

Protein Analysis

919

Amino Acids

104.69

Weight (kDa)

6.15

Isoelectric Point (pI)

41.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	177 - 339	5.8e-24	NB-ARC domain
LRR_14	PF23598	617 - 895	2.3e-10	Leucine-rich repeat region
LRR_RPS2	PF23247	801 - 890	3.4e-11	Plant disease resistance protein RPS2-like, leucine-rich repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003701)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0085081 RchiOBHm_Chr2g0111441 RchiOBHm_Chr7g0202501 RchiOBHm_Chr7g0203351 RchiOBHm_Chr7g0236751 RchiOBHm_Chr7g0236761
rosa_laevigata	RLG00000003593 RLG00000003598
rosa_multiflora	Rmu_co8454035.1_g000001 Rmu_sc0001389.1_g000006 Rmu_sc0009832.1_g000003 Rmu_sc0013542.1_g000001
rosa_roxburghii	Rroxscaffold_2G00132350 Rroxscaffold_2G00132380 Rroxscaffold_3G00224900 Rroxscaffold_3G00254560
rosa_rugosa	Rorug02G0174000 Rorug02G0174100 Rorug02G0174100
rosa_samantha	Rh2AG226800 Rh2BG238600 Rh2CG230700 Rh2DG007300 Rh2DG234400 Rh2DG235400 Rh7AG198500 Rh7AG454300 Rh7BG199800 Rh7BG425300 Rh7BG425400 Rh7CG210000 Rh7DG205400 Rh7DG441800 Rh7DG441900
rosa_wichuraiana	Rw7G017420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1004
AatII	GACGTC	1 cut(s)	533
Acc36I	ACCTGC	2 cut(s)	283, 1004
AccBSI	CCGCTC	1 cut(s)	302
AccI	GTMKAC	1 cut(s)	1420
AccII	CGCG	1 cut(s)	7
AciI	CCGC	3 cut(s)	245, 302, 577
AclI	AACGTT	1 cut(s)	1035
AclWI	GGATC	2 cut(s)	1191, 1199
AcsI	RAATTY	4 cut(s)	772, 1322, 1872, 2647
AcyI	GRCGYC	2 cut(s)	139, 530
AfaI	GTAC	6 cut(s)	25, 119, 395, 509, 1473, 1612
AfeI	AGCGCT	1 cut(s)	2287
AfiI	CCNNNNNNNGG	2 cut(s)	1210, 1211
AflIII	ACRYGT	1 cut(s)	5
AjnI	CCWGG	4 cut(s)	510, 711, 803, 1637
Alw21I	GWGCWC	2 cut(s)	271, 2376
Alw26I	GTCTC	7 cut(s)	54, 213, 371, 1830, 2002, 2106, 2240
AlwI	GGATC	2 cut(s)	1191, 1199
AlwNI	CAGNNNCTG	1 cut(s)	1792
Aor51HI	AGCGCT	1 cut(s)	2287
AoxI	GGCC	1 cut(s)	1339
ApeKI	GCWGC	1 cut(s)	1855
ApoI	RAATTY	4 cut(s)	772, 1322, 1872, 2647
Asp700I	GAANNNNTTC	2 cut(s)	720, 956
AspLEI	GCGC	2 cut(s)	1624, 2288
AspS9I	GGNCC	3 cut(s)	328, 596, 1339
AsuC2I	CCSGG	1 cut(s)	502
AsuHPI	GGTGA	5 cut(s)	170, 1028, 1550, 1694, 1974
AsuII	TTCGAA	1 cut(s)	1118
AvaII	GGWCC	2 cut(s)	328, 596
BaeGI	GKGCMC	1 cut(s)	577
BanII	GRGCYC	1 cut(s)	271
BarI	GAAGNNNNNNTAC	4 cut(s)	1582, 1614, 2685, 2717
BbsI	GAAGAC	4 cut(s)	1590, 1928, 2022, 2340
Bbv12I	GWGCWC	2 cut(s)	271, 2376
BbvI	GCAGC	1 cut(s)	1867
BccI	CCATC	7 cut(s)	195, 335, 1097, 1499, 1526, 1711, 2342
BcgI	CGANNNNNNTGC	4 cut(s)	1098, 1132, 1913, 1947
BciT130I	CCWGG	4 cut(s)	512, 713, 805, 1639
BciVI	GTATCC	4 cut(s)	505, 801, 1635, 2293
BcnI	CCSGG	1 cut(s)	502
BcoDI	GTCTC	7 cut(s)	54, 213, 371, 1830, 2002, 2106, 2240
BfaI	CTAG	8 cut(s)	407, 570, 600, 648, 882, 1562, 2012, 2738
BfoI	RGCGCY	1 cut(s)	2289
BfuAI	ACCTGC	2 cut(s)	283, 1004
BfuI	GTATCC	4 cut(s)	505, 801, 1635, 2293
BisI	GCNGC	2 cut(s)	246, 1856
BlsI	GCNGC	2 cut(s)	247, 1857
BmcAI	AGTACT	1 cut(s)	1612
Bme1390I	CCNGG	5 cut(s)	502, 512, 713, 805, 1639
Bme18I	GGWCC	2 cut(s)	328, 596
BmgT120I	GGNCC	3 cut(s)	328, 596, 1339
BmiI	GGNNCC	1 cut(s)	40
BmrFI	CCNGG	5 cut(s)	502, 512, 713, 805, 1639
BmsI	GCATC	8 cut(s)	232, 856, 936, 1151, 1369, 1689, 1768, 2573
BpiI	GAAGAC	4 cut(s)	1590, 1928, 2022, 2340
BplI	GAGNNNNNCTC	2 cut(s)	2206, 2238
BpmI	CTGGAG	3 cut(s)	40, 2501, 2646
Bpu10I	CCTNAGC	1 cut(s)	2508
Bpu14I	TTCGAA	1 cut(s)	1118
BpuEI	CTTGAG	5 cut(s)	1044, 1391, 2041, 2255, 2376
BpuMI	CCSGG	1 cut(s)	502
BsaAI	YACGTR	1 cut(s)	1475
BsaBI	GATNNNNATC	2 cut(s)	345, 1182
BsaHI	GRCGYC	2 cut(s)	139, 530
BsaI	GGTCTC	1 cut(s)	54
BsaJI	CCNNGG	7 cut(s)	87, 370, 501, 1830, 2343, 2474, 2688
Bsc4I	CCNNNNNNNGG	2 cut(s)	1210, 1211
Bse1I	ACTGG	2 cut(s)	1608, 1893
Bse3DI	GCAATG	1 cut(s)	64
Bse8I	GATNNNNATC	2 cut(s)	345, 1182
BseBI	CCWGG	4 cut(s)	512, 713, 805, 1639
BseDI	CCNNGG	7 cut(s)	87, 370, 501, 1830, 2343, 2474, 2688
BseGI	GGATG	6 cut(s)	439, 559, 844, 871, 1703, 2353
BseJI	GATNNNNATC	2 cut(s)	345, 1182
BseLI	CCNNNNNNNGG	2 cut(s)	1210, 1211
BseMI	GCAATG	1 cut(s)	64
BseMII	CTCAG	8 cut(s)	204, 225, 326, 1891, 1901, 2076, 2117, 2575
BseNI	ACTGG	2 cut(s)	1608, 1893
BseSI	GKGCMC	1 cut(s)	577
BseXI	GCAGC	1 cut(s)	1867
BsgI	GTGCAG	3 cut(s)	437, 1606, 2688
Bsh1236I	CGCG	1 cut(s)	7
BshFI	GGCC	1 cut(s)	1341
BsiHKAI	GWGCWC	2 cut(s)	271, 2376
BsiSI	CCGG	1 cut(s)	501
BslFI	GGGAC	4 cut(s)	872, 888, 2579, 2712
BslI	CCNNNNNNNGG	2 cut(s)	1210, 1211
BsmAI	GTCTC	7 cut(s)	54, 213, 371, 1830, 2002, 2106, 2240
BsmBI	CGTCTC	2 cut(s)	1830, 2240
BsmFI	GGGAC	4 cut(s)	872, 888, 2579, 2712
BsmI	GAATGC	3 cut(s)	1464, 1496, 2140
BsnI	GGCC	1 cut(s)	1341
Bso31I	GGTCTC	1 cut(s)	54
Bsp119I	TTCGAA	1 cut(s)	1118
Bsp1286I	GDGCHC	3 cut(s)	271, 577, 2376
Bsp143I	GATC	5 cut(s)	309, 416, 521, 1183, 1191
Bsp19I	CCATGG	2 cut(s)	87, 370
BspACI	CCGC	3 cut(s)	245, 302, 577
BspANI	GGCC	1 cut(s)	1341
BspCNI	CTCAG	8 cut(s)	205, 226, 327, 1890, 1900, 2077, 2116, 2574
BspFNI	CGCG	1 cut(s)	7
BspLI	GGNNCC	1 cut(s)	40
BspMI	ACCTGC	2 cut(s)	283, 1004
BspPI	GGATC	2 cut(s)	1191, 1199
BspQI	GCTCTTC	2 cut(s)	778, 1120
BspT104I	TTCGAA	1 cut(s)	1118
BspTNI	GGTCTC	1 cut(s)	54
BsrBI	CCGCTC	1 cut(s)	302
BsrDI	GCAATG	1 cut(s)	64
BsrI	ACTGG	2 cut(s)	1608, 1893
BssECI	CCNNGG	7 cut(s)	87, 370, 501, 1830, 2343, 2474, 2688
BssMI	GATC	5 cut(s)	309, 416, 521, 1183, 1191
BssNI	GRCGYC	2 cut(s)	139, 530
BssT1I	CCWWGG	6 cut(s)	87, 370, 1830, 2343, 2474, 2688
Bst2UI	CCWGG	4 cut(s)	512, 713, 805, 1639
Bst6I	CTCTTC	7 cut(s)	778, 978, 1120, 1164, 1349, 1788, 2688
BstACI	GRCGYC	2 cut(s)	139, 530
BstAPI	GCANNNNNTGC	1 cut(s)	1379
BstBAI	YACGTR	1 cut(s)	1475
BstBI	TTCGAA	1 cut(s)	1118
BstC8I	GCNNGC	9 cut(s)	294, 577, 645, 1111, 1311, 1371, 1806, 2077, 2529
BstDSI	CCRYGG	2 cut(s)	87, 370
BstF5I	GGATG	6 cut(s)	439, 559, 844, 871, 1703, 2353
BstFNI	CGCG	1 cut(s)	7
BstH2I	RGCGCY	1 cut(s)	2289
BstHHI	GCGC	2 cut(s)	1624, 2288
BstKTI	GATC	5 cut(s)	312, 419, 524, 1186, 1194
BstMAI	GTCTC	7 cut(s)	54, 213, 371, 1830, 2002, 2106, 2240
BstMBI	GATC	5 cut(s)	309, 416, 521, 1183, 1191
BstMWI	GCNNNNNNNGC	6 cut(s)	75, 275, 1379, 1669, 2076, 2537
BstNI	CCWGG	4 cut(s)	512, 713, 805, 1639
BstNSI	RCATGY	2 cut(s)	803, 1808
BstSCI	CCNGG	5 cut(s)	500, 510, 711, 803, 1637
BstSLI	GKGCMC	1 cut(s)	577
BstUI	CGCG	1 cut(s)	7
BstV1I	GCAGC	1 cut(s)	1867
BstV2I	GAAGAC	4 cut(s)	1590, 1928, 2022, 2340
BsuI	GTATCC	4 cut(s)	505, 801, 1635, 2293
BsuRI	GGCC	1 cut(s)	1341
BtgI	CCRYGG	2 cut(s)	87, 370
BtsCI	GGATG	6 cut(s)	439, 559, 844, 871, 1703, 2353
BtsI	GCAGTG	3 cut(s)	160, 2231, 2676
BtsIMutI	CAGTG	7 cut(s)	160, 312, 1438, 1900, 2231, 2661, 2676
BveI	ACCTGC	2 cut(s)	283, 1004
Cac8I	GCNNGC	9 cut(s)	294, 577, 645, 1111, 1311, 1371, 1806, 2077, 2529
CaiI	CAGNNNCTG	1 cut(s)	1792
CfoI	GCGC	2 cut(s)	1624, 2288
Cfr13I	GGNCC	3 cut(s)	328, 596, 1339
CseI	GACGC	2 cut(s)	13, 147
Csp6I	GTAC	6 cut(s)	24, 118, 394, 508, 1472, 1611
CspCI	CAANNNNNGTGG	2 cut(s)	467, 502
CviAII	CATG	8 cut(s)	79, 88, 371, 550, 800, 1143, 1463, 1805
CviQI	GTAC	6 cut(s)	24, 118, 394, 508, 1472, 1611
DpnI	GATC	5 cut(s)	311, 418, 523, 1185, 1193
DpnII	GATC	5 cut(s)	309, 416, 521, 1183, 1191
DraI	TTTAAA	1 cut(s)	1818
Eam1104I	CTCTTC	7 cut(s)	778, 978, 1120, 1164, 1349, 1788, 2688
EarI	CTCTTC	7 cut(s)	778, 978, 1120, 1164, 1349, 1788, 2688
Ecl136II	GAGCTC	1 cut(s)	269
Eco130I	CCWWGG	6 cut(s)	87, 370, 1830, 2343, 2474, 2688
Eco24I	GRGCYC	1 cut(s)	271
Eco31I	GGTCTC	1 cut(s)	54
Eco32I	GATATC	1 cut(s)	2447
Eco47I	GGWCC	2 cut(s)	328, 596
Eco47III	AGCGCT	1 cut(s)	2287
Eco53kI	GAGCTC	1 cut(s)	269
EcoICRI	GAGCTC	1 cut(s)	269
EcoO109I	RGGNCCY	1 cut(s)	328
EcoRII	CCWGG	4 cut(s)	510, 711, 803, 1637
EcoRV	GATATC	1 cut(s)	2447
EcoT14I	CCWWGG	6 cut(s)	87, 370, 1830, 2343, 2474, 2688
EcoT22I	ATGCAT	3 cut(s)	1384, 1464, 1806
EcoT38I	GRGCYC	1 cut(s)	271
ErhI	CCWWGG	6 cut(s)	87, 370, 1830, 2343, 2474, 2688
Esp3I	CGTCTC	2 cut(s)	1830, 2240
FaeI	CATG	8 cut(s)	82, 91, 374, 553, 803, 1146, 1466, 1808
FalI	AAGNNNNNCTT	2 cut(s)	1559, 1591
FaqI	GGGAC	4 cut(s)	872, 888, 2579, 2712
FatI	CATG	8 cut(s)	78, 87, 370, 549, 799, 1142, 1462, 1804
FauI	CCCGC	1 cut(s)	584
FblI	GTMKAC	1 cut(s)	1420
Fnu4HI	GCNGC	2 cut(s)	246, 1856
FokI	GGATG	6 cut(s)	446, 566, 851, 878, 1690, 2360
FriOI	GRGCYC	1 cut(s)	271
Fsp4HI	GCNGC	2 cut(s)	246, 1856
FspBI	CTAG	8 cut(s)	407, 570, 600, 648, 882, 1562, 2012, 2738
GlaI	GCGC	2 cut(s)	1623, 2287
GluI	GCNGC	2 cut(s)	246, 1856
GsuI	CTGGAG	3 cut(s)	40, 2501, 2646
HaeII	RGCGCY	1 cut(s)	2289
HaeIII	GGCC	1 cut(s)	1341
HapII	CCGG	1 cut(s)	501
HgaI	GACGC	2 cut(s)	13, 147
HhaI	GCGC	2 cut(s)	1624, 2288
Hin1I	GRCGYC	2 cut(s)	139, 530
Hin1II	CATG	8 cut(s)	82, 91, 374, 553, 803, 1146, 1466, 1808
Hin6I	GCGC	2 cut(s)	1622, 2286
HinP1I	GCGC	2 cut(s)	1622, 2286
HincII	GTYRAC	1 cut(s)	534
HindII	GTYRAC	1 cut(s)	534
HindIII	AAGCTT	1 cut(s)	1999
HinfI	GANTC	9 cut(s)	15, 92, 757, 823, 832, 1723, 1930, 2181, 2612
HpaII	CCGG	1 cut(s)	501
HphI	GGTGA	5 cut(s)	170, 1028, 1550, 1694, 1974
Hpy166II	GTNNAC	4 cut(s)	120, 534, 596, 1421
Hpy8I	GTNNAC	4 cut(s)	120, 534, 596, 1421
Hpy99I	CGWCG	2 cut(s)	12, 2583
HpyCH4IV	ACGT	5 cut(s)	530, 1035, 1474, 1839, 2568
HpyF10VI	GCNNNNNNNGC	6 cut(s)	75, 275, 1379, 1669, 2076, 2537
HpySE526I	ACGT	5 cut(s)	530, 1035, 1474, 1839, 2568
Hsp92I	GRCGYC	2 cut(s)	139, 530
Hsp92II	CATG	8 cut(s)	82, 91, 374, 553, 803, 1146, 1466, 1808
HspAI	GCGC	2 cut(s)	1622, 2286
Kzo9I	GATC	5 cut(s)	309, 416, 521, 1183, 1191
LguI	GCTCTTC	2 cut(s)	778, 1120
LmnI	GCTCC	4 cut(s)	1366, 2401, 2627, 2638
Lsp1109I	GCAGC	1 cut(s)	1867
LweI	GCATC	8 cut(s)	232, 856, 936, 1151, 1369, 1689, 1768, 2573
MaeI	CTAG	8 cut(s)	407, 570, 600, 648, 882, 1562, 2012, 2738
MaeII	ACGT	5 cut(s)	530, 1035, 1474, 1839, 2568
MaeIII	GTNAC	4 cut(s)	1226, 1633, 1767, 2569
MalI	GATC	5 cut(s)	311, 418, 523, 1185, 1193
MbiI	CCGCTC	1 cut(s)	302
MboI	GATC	5 cut(s)	309, 416, 521, 1183, 1191
MfeI	CAATTG	3 cut(s)	1095, 1235, 1904
MhlI	GDGCHC	3 cut(s)	271, 577, 2376
MluI	ACGCGT	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	1924, 2606
MmeI	TCCRAC	4 cut(s)	115, 1722, 1731, 1926
Mph1103I	ATGCAT	3 cut(s)	1384, 1464, 1806
MroXI	GAANNNNTTC	2 cut(s)	720, 956
MslI	CAYNNNNRTG	2 cut(s)	317, 798
MspI	CCGG	1 cut(s)	501
MspR9I	CCNGG	5 cut(s)	502, 512, 713, 805, 1639
MunI	CAATTG	3 cut(s)	1095, 1235, 1904
Mva1269I	GAATGC	3 cut(s)	1464, 1496, 2140
MvaI	CCWGG	4 cut(s)	512, 713, 805, 1639
MvnI	CGCG	1 cut(s)	7
MwoI	GCNNNNNNNGC	6 cut(s)	75, 275, 1379, 1669, 2076, 2537
NciI	CCSGG	1 cut(s)	502
NcoI	CCATGG	2 cut(s)	87, 370
NdeII	GATC	5 cut(s)	309, 416, 521, 1183, 1191
NlaIII	CATG	8 cut(s)	82, 91, 374, 553, 803, 1146, 1466, 1808
NlaIV	GGNNCC	1 cut(s)	40
NmeAIII	GCCGAG	1 cut(s)	139
NmuCI	GTSAC	1 cut(s)	1767
NsiI	ATGCAT	3 cut(s)	1384, 1464, 1806
NspI	RCATGY	2 cut(s)	803, 1808
NspV	TTCGAA	1 cut(s)	1118
PaeI	GCATGC	1 cut(s)	1808
PaqCI	CACCTGC	1 cut(s)	1004
PciSI	GCTCTTC	2 cut(s)	778, 1120
PctI	GAATGC	3 cut(s)	1464, 1496, 2140
PdmI	GAANNNNTTC	2 cut(s)	720, 956
PfeI	GAWTC	7 cut(s)	15, 92, 757, 823, 832, 1723, 2181
PkrI	GCNGC	2 cut(s)	247, 1857
PleI	GAGTC	2 cut(s)	1924, 2606
PpsI	GAGTC	2 cut(s)	1924, 2606
Ppu21I	YACGTR	1 cut(s)	1475
PpuMI	RGGWCCY	1 cut(s)	328
Psp124BI	GAGCTC	1 cut(s)	271
Psp1406I	AACGTT	1 cut(s)	1035
Psp5II	RGGWCCY	1 cut(s)	328
Psp6I	CCWGG	4 cut(s)	510, 711, 803, 1637
PspGI	CCWGG	4 cut(s)	510, 711, 803, 1637
PspN4I	GGNNCC	1 cut(s)	40
PspPI	GGNCC	3 cut(s)	328, 596, 1339
PspPPI	RGGWCCY	1 cut(s)	328
PstNI	CAGNNNCTG	1 cut(s)	1792
RsaI	GTAC	6 cut(s)	25, 119, 395, 509, 1473, 1612
RsaNI	GTAC	6 cut(s)	24, 118, 394, 508, 1472, 1611
RseI	CAYNNNNRTG	2 cut(s)	317, 798
SacI	GAGCTC	1 cut(s)	271
SapI	GCTCTTC	2 cut(s)	778, 1120
SatI	GCNGC	2 cut(s)	246, 1856
Sau3AI	GATC	5 cut(s)	309, 416, 521, 1183, 1191
Sau96I	GGNCC	3 cut(s)	328, 596, 1339
ScaI	AGTACT	1 cut(s)	1612
SchI	GAGTC	2 cut(s)	1924, 2606
ScrFI	CCNGG	5 cut(s)	502, 512, 713, 805, 1639
SduI	GDGCHC	3 cut(s)	271, 577, 2376
SfaNI	GCATC	8 cut(s)	232, 856, 936, 1151, 1369, 1689, 1768, 2573
SfuI	TTCGAA	1 cut(s)	1118
SinI	GGWCC	2 cut(s)	328, 596
SmiMI	CAYNNNNRTG	2 cut(s)	317, 798
SmlI	CTYRAG	5 cut(s)	1059, 1406, 2020, 2270, 2391
SmoI	CTYRAG	5 cut(s)	1059, 1406, 2020, 2270, 2391
SphI	GCATGC	1 cut(s)	1808
SsiI	CCGC	3 cut(s)	245, 302, 577
SspMI	CTAG	8 cut(s)	407, 570, 600, 648, 882, 1562, 2012, 2738
SstI	GAGCTC	1 cut(s)	271
StyD4I	CCNGG	5 cut(s)	500, 510, 711, 803, 1637
StyI	CCWWGG	6 cut(s)	87, 370, 1830, 2343, 2474, 2688
TaiI	ACGT	5 cut(s)	533, 1038, 1477, 1842, 2571
TaqI	TCGA	7 cut(s)	349, 520, 966, 1118, 2224, 2376, 2578
TatI	WGTACW	2 cut(s)	117, 1610
TauI	GCSGC	1 cut(s)	248
TfiI	GAWTC	7 cut(s)	15, 92, 757, 823, 832, 1723, 2181
TscAI	CASTG	7 cut(s)	167, 319, 1438, 1900, 2238, 2661, 2676
TseFI	GTSAC	1 cut(s)	1767
TseI	GCWGC	1 cut(s)	1855
Tsp45I	GTSAC	1 cut(s)	1767
TspDTI	ATGAA	5 cut(s)	276, 570, 767, 1131, 1767
TspGWI	ACGGA	3 cut(s)	795, 1196, 2101
TspRI	CASTG	7 cut(s)	167, 319, 1438, 1900, 2238, 2661, 2676
VpaK11BI	GGWCC	2 cut(s)	328, 596
XapI	RAATTY	4 cut(s)	772, 1322, 1872, 2647
XceI	RCATGY	2 cut(s)	803, 1808
XcmI	CCANNNNNNNNNTGG	1 cut(s)	188
XmiI	GTMKAC	1 cut(s)	1420
XmnI	GAANNNNTTC	2 cut(s)	720, 956
XspI	CTAG	8 cut(s)	407, 570, 600, 648, 882, 1562, 2012, 2738
ZraI	GACGTC	1 cut(s)	531
ZrmI	AGTACT	1 cut(s)	1612
Zsp2I	ATGCAT	3 cut(s)	1384, 1464, 1806

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.