Rorug01G0436600

START domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0003829
Physical Location & Seq
Reverse (-)
53544416 .. 53548458
4043 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0436600.1

Sequence Viewer

Length: 1305 bp
ATGGATGTAGACGGAGGCGGAAGCAAGCGGATCTTCACGAGATTGGGCGGGCCGCAATCCGACCCGAACAAGAATCAGAAGGTATGCTACCATTGGAGAGCGGGCAAGTGCAATCGCCACCCTTGCCCTTATCTCCACCGAGAGCTACCGGCGCCGCCTGGCGGGCTCAACGGAACGGCGTCGTCTAAGCGGCAACACGGCTTCGCAGCCGCCACCGACGGCCCGTCGTCGGGGCCACGTGGCCGGGGTCCGAATAACTTCAACGGCGGAGCTTCGAACACGTGGGGGCGGACCGGAGGAGGTAATAGGGTTTTCGTTAGGAAGATGGATAAGGTGTGTAATTATTGGGTTCAGGGGAACTGTAGCTATGGCGATAGGTGTAAGTTCTTGCATTCTTGGAGCATGGGGGACTGTGTTAGCTTGTTGACGACGCTTGAGGGGCATCAGAATGTTGTTAGTGGGATTGCATTGCCTTCTGGGTCTGATAAGCTTTATACTGGAAGTAAGGATGAGACTGTGAGAGTATGGGATTGCCAGTCTGGTCAGTGCCTGGGAGTAATTAATCTTGGTGGTGAAGTGGGTTGTATGATCAGTGAAGGTCCTTGGGTTTTTGTTGGTATACCAAATGCTGTAAAGGCGTGGAACACCCAAGCTAACTCCGAAATGAGTCTTAGTGGGCCTGTTGGACAAGTTTATGCCATGGTTGTGGGCAATGATTTGCTCTTTGCTGGTACGCAGGATGGTTCTATCTTGGCTTGGAAGTTTAATACAGTCACTAAGTGCTTCGAACCGGCTTATTCACTTAAAGGTCACACCCTTGCAGTTGTATCATTAGTAGTTGGAGCAAACAGGCTTTATTCTGGTTCAATGGATCATTCTATAAGGGTCTGGAGCCTAGAGAACTTGCAATGTATACAAACACTAACAGAGCATACGTCAGTTGTGATGTCCGTTCTTTGCTGGGATCAGTTTCTCTTATCATCTTCTTTGGATCAAAAATTAAAGATCTGGGCTGCTACTCAAAGTGGAAACTTGGAAGTAACATATACTCACGAAGAAGACCATCCTTTGCTTACGCTTTGCGGGATGCATGATTCAGAAGCCAAGCCAGTCTTACTCTGTGCATGCAATGACAACACTGTCCGCCTCTATGATTTGCCATCGTTTTCCGAGAGGGGCAAAATTTTCTCAAAACAGGAGATACGAGCAATCCAGGTTGGCCCTGGTGGCCTGTTTTTCACTGGCGATGGAACTGGACAAGTGAGAGTATGGAAGTGGTTGGCCGAACCAGTTGCAACTGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
START

Protein Analysis

434

Amino Acids

47.04

Weight (kDa)

8.1

Isoelectric Point (pI)

27.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH_4 PF18044 111 - 131 1.2e-07 CCCH-type zinc finger
zf-CCCH PF00642 112 - 132 6e-07 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf_CCCH_4 PF18345 113 - 131 1.4e-07 Zinc finger domain
Beta-prop_WDR75_1st PF23869 121 - 187 9.3e-06 WD repeat-containing protein 75 first beta-propeller
Beta-prop_WDR5 PF25175 140 - 187 4.5e-08 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 140 - 318 1.6e-22 THOC3 beta-propeller domain
WD40 PF00400 141 - 177 4e-07 WD domain, G-beta repeat
EIF3I PF24805 142 - 191 1.4e-06 EIF3I
Beta-prop_WDR3_1st PF25173 142 - 185 1.7e-06 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 154 - 342 1e-08 Echinoderm microtubule-associated protein second beta-propeller
WD40_CDC20-Fz PF24807 202 - 346 1.3e-10 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 203 - 386 2.2e-19 WDR3 first beta-propeller domain
WD40_WDHD1_1st PF24817 206 - 426 2.6e-13 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 211 - 388 1.9e-17 WDR5 beta-propeller domain
Beta-prop_IP5PC_F PF23754 229 - 312 2.4e-06 IP5P C-F beta-propeller
WD40_Prp19 PF24814 238 - 318 4.9e-07 Prp19 WD40 domain
WDR55 PF24796 238 - 387 7e-08 WDR55
Beta-prop_WDR3_2nd PF25172 263 - 385 4.8e-09 WDR3 second beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 280 - 388 9.3e-06 MABP1/WDR62 second WD40 domain
Beta-prop_TEP1_2nd PF25047 283 - 352 2.2e-06 TEP-1 second beta-propeller
WD40_Prp19 PF24814 283 - 425 2.6e-13 Prp19 WD40 domain
Beta-prop_THOC3 PF25174 283 - 426 8.6e-14 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1139
AccB1I GGYRCC 1 cut(s) 151
AccBSI CCGCTC 1 cut(s) 101
AccI GTMKAC 3 cut(s) 9, 619, 913
AclWI GGATC 4 cut(s) 38, 879, 972, 999
AcoI YGGCCR 2 cut(s) 241, 1281
AcsI RAATTY 1 cut(s) 1182
AcvI CACGTG 2 cut(s) 239, 282
AcyI GRCGYC 2 cut(s) 152, 179
AdeI CACNNNGTG 1 cut(s) 780
AfaI GTAC 1 cut(s) 733
AfiI CCNNNNNNNGG 3 cut(s) 161, 229, 230
AflIII ACRYGT 1 cut(s) 279
AgsI TTSAA 2 cut(s) 262, 867
AhdI GACNNNNNGTC 1 cut(s) 223
AjnI CCWGG 4 cut(s) 157, 549, 1212, 1222
AluBI AGCT 6 cut(s) 145, 272, 366, 420, 490, 653
AluI AGCT 6 cut(s) 145, 272, 366, 420, 490, 653
Alw26I GTCTC 1 cut(s) 506
AlwI GGATC 4 cut(s) 38, 879, 972, 999
AlwNI CAGNNNCTG 1 cut(s) 550
AoxI GGCC 8 cut(s) 50, 220, 233, 241, 677, 1219, 1228, 1281
ApeKI GCWGC 2 cut(s) 206, 1013
ApoI RAATTY 1 cut(s) 1182
AseI ATTAAT 1 cut(s) 561
Asp700I GAANNNNTTC 1 cut(s) 257
AspLEI GCGC 1 cut(s) 154
AspS9I GGNCC 8 cut(s) 50, 221, 233, 248, 291, 599, 677, 1220
AsuC2I CCSGG 1 cut(s) 245
AsuHPI GGTGA 1 cut(s) 584
AsuII TTCGAA 2 cut(s) 275, 786
AvaII GGWCC 3 cut(s) 248, 291, 599
BanI GGYRCC 1 cut(s) 151
BanII GRGCYC 1 cut(s) 168
BarI GAAGNNNNNNTAC 2 cut(s) 71, 103
BauI CACGAG 1 cut(s) 37
BbrPI CACGTG 2 cut(s) 239, 282
BbsI GAAGAC 1 cut(s) 1065
BbvI GCAGC 2 cut(s) 218, 1000
BccI CCATC 5 cut(s) 319, 734, 1071, 1168, 1241
BceAI ACGGC 4 cut(s) 192, 214, 235, 280
BcgI CGANNNNNNTGC 1 cut(s) 1274
BciT130I CCWGG 4 cut(s) 159, 551, 1214, 1224
BclI TGATCA 1 cut(s) 588
BcnI CCSGG 1 cut(s) 245
BcoDI GTCTC 1 cut(s) 506
BfaI CTAG 1 cut(s) 896
BfmI CTRYAG 1 cut(s) 361
BfoI RGCGCY 1 cut(s) 155
BglI GCCNNNNNGGC 2 cut(s) 163, 1227
BglII AGATCT 1 cut(s) 1005
BisI GCNGC 6 cut(s) 53, 155, 191, 207, 210, 1014
BlsI GCNGC 6 cut(s) 54, 156, 192, 208, 211, 1015
Bme1390I CCNGG 5 cut(s) 159, 245, 551, 1214, 1224
Bme18I GGWCC 3 cut(s) 248, 291, 599
BmeRI GACNNNNNGTC 1 cut(s) 223
BmgT120I GGNCC 8 cut(s) 50, 221, 233, 248, 291, 599, 677, 1220
BmiI GGNNCC 4 cut(s) 153, 234, 249, 893
BmrFI CCNGG 5 cut(s) 159, 245, 551, 1214, 1224
BmsI GCATC 2 cut(s) 451, 1077
BpiI GAAGAC 1 cut(s) 1065
BpmI CTGGAG 1 cut(s) 910
Bpu14I TTCGAA 2 cut(s) 275, 786
BpuEI CTTGAG 1 cut(s) 455
BpuMI CCSGG 1 cut(s) 245
BsaAI YACGTR 2 cut(s) 239, 282
BsaHI GRCGYC 2 cut(s) 152, 179
BsaJI CCNNGG 5 cut(s) 244, 550, 602, 699, 1222
BsaWI WCCGGW 1 cut(s) 293
Bsc4I CCNNNNNNNGG 3 cut(s) 161, 229, 230
Bse118I RCCGGY 2 cut(s) 148, 790
Bse1I ACTGG 6 cut(s) 502, 535, 1109, 1246, 1258, 1289
Bse3DI GCAATG 4 cut(s) 467, 718, 914, 1135
BseBI CCWGG 4 cut(s) 159, 551, 1214, 1224
BseDI CCNNGG 5 cut(s) 244, 550, 602, 699, 1222
BseGI GGATG 5 cut(s) 10, 514, 745, 1063, 1092
BseLI CCNNNNNNNGG 3 cut(s) 161, 229, 230
BseMI GCAATG 4 cut(s) 467, 718, 914, 1135
BseNI ACTGG 6 cut(s) 502, 535, 1109, 1246, 1258, 1289
BseRI GAGGAG 1 cut(s) 312
BseXI GCAGC 2 cut(s) 218, 1000
BseYI CCCAGC 1 cut(s) 960
BshFI GGCC 8 cut(s) 52, 222, 235, 243, 679, 1221, 1230, 1283
BshNI GGYRCC 1 cut(s) 151
BsiSI CCGG 4 cut(s) 149, 244, 294, 791
BslFI GGGAC 1 cut(s) 422
BslI CCNNNNNNNGG 3 cut(s) 161, 229, 230
BsmAI GTCTC 1 cut(s) 506
BsmFI GGGAC 1 cut(s) 422
BsmI GAATGC 1 cut(s) 391
BsnI GGCC 8 cut(s) 52, 222, 235, 243, 679, 1221, 1230, 1283
Bsp119I TTCGAA 2 cut(s) 275, 786
Bsp1286I GDGCHC 1 cut(s) 168
Bsp143I GATC 6 cut(s) 30, 588, 871, 964, 991, 1005
Bsp19I CCATGG 1 cut(s) 699
BspANI GGCC 8 cut(s) 52, 222, 235, 243, 679, 1221, 1230, 1283
BspLI GGNNCC 4 cut(s) 153, 234, 249, 893
BspPI GGATC 4 cut(s) 38, 879, 972, 999
BspT104I TTCGAA 2 cut(s) 275, 786
BspT107I GGYRCC 1 cut(s) 151
BsrBI CCGCTC 1 cut(s) 101
BsrDI GCAATG 4 cut(s) 467, 718, 914, 1135
BsrFI RCCGGY 2 cut(s) 148, 790
BsrI ACTGG 6 cut(s) 502, 535, 1109, 1246, 1258, 1289
BssAI RCCGGY 2 cut(s) 148, 790
BssECI CCNNGG 5 cut(s) 244, 550, 602, 699, 1222
BssMI GATC 6 cut(s) 30, 588, 871, 964, 991, 1005
BssNAI GTATAC 2 cut(s) 620, 914
BssNI GRCGYC 2 cut(s) 152, 179
BssSI CACGAG 1 cut(s) 37
BssT1I CCWWGG 2 cut(s) 602, 699
Bst1107I GTATAC 2 cut(s) 620, 914
Bst2BI CACGAG 1 cut(s) 37
Bst2UI CCWGG 4 cut(s) 159, 551, 1214, 1224
Bst4CI ACNGT 5 cut(s) 362, 413, 517, 772, 1141
BstACI GRCGYC 2 cut(s) 152, 179
BstBAI YACGTR 2 cut(s) 239, 282
BstBI TTCGAA 2 cut(s) 275, 786
BstC8I GCNNGC 5 cut(s) 26, 50, 103, 164, 1126
BstDEI CTNAG 3 cut(s) 186, 671, 777
BstDSI CCRYGG 1 cut(s) 699
BstF5I GGATG 5 cut(s) 10, 514, 745, 1063, 1092
BstH2I RGCGCY 1 cut(s) 155
BstHHI GCGC 1 cut(s) 154
BstKTI GATC 6 cut(s) 33, 591, 874, 967, 994, 1008
BstMAI GTCTC 1 cut(s) 506
BstMBI GATC 6 cut(s) 30, 588, 871, 964, 991, 1005
BstMWI GCNNNNNNNGC 6 cut(s) 123, 151, 163, 439, 635, 1227
BstNI CCWGG 4 cut(s) 159, 551, 1214, 1224
BstNSI RCATGY 1 cut(s) 1128
BstSCI CCNGG 5 cut(s) 157, 243, 549, 1212, 1222
BstSFI CTRYAG 1 cut(s) 361
BstV1I GCAGC 2 cut(s) 218, 1000
BstV2I GAAGAC 1 cut(s) 1065
BstX2I RGATCY 2 cut(s) 30, 1005
BstXI CCANNNNNNTGG 1 cut(s) 706
BstYI RGATCY 2 cut(s) 30, 1005
BstZ17I GTATAC 2 cut(s) 620, 914
BsuRI GGCC 8 cut(s) 52, 222, 235, 243, 679, 1221, 1230, 1283
BtgI CCRYGG 1 cut(s) 699
BtgZI GCGATG 1 cut(s) 1260
BtsCI GGATG 5 cut(s) 10, 514, 745, 1063, 1092
BtsIMutI CAGTG 4 cut(s) 551, 598, 1137, 1239
Cac8I GCNNGC 5 cut(s) 26, 50, 103, 164, 1126
CaiI CAGNNNCTG 1 cut(s) 550
CfoI GCGC 1 cut(s) 154
Cfr10I RCCGGY 2 cut(s) 148, 790
Cfr13I GGNCC 8 cut(s) 50, 221, 233, 248, 291, 599, 677, 1220
CpoI CGGWCCG 1 cut(s) 291
CseI GACGC 2 cut(s) 168, 439
Csp6I GTAC 1 cut(s) 732
CspI CGGWCCG 1 cut(s) 291
CviAII CATG 4 cut(s) 403, 700, 1091, 1125
CviQI GTAC 1 cut(s) 732
DdeI CTNAG 3 cut(s) 186, 671, 777
DinI GGCGCC 1 cut(s) 153
DpnI GATC 6 cut(s) 32, 590, 873, 966, 993, 1007
DpnII GATC 6 cut(s) 30, 588, 871, 964, 991, 1005
DraIII CACNNNGTG 1 cut(s) 780
DrdI GACNNNNNNGTC 1 cut(s) 1139
DriI GACNNNNNGTC 1 cut(s) 223
DseDI GACNNNNNNGTC 1 cut(s) 1139
EaeI YGGCCR 2 cut(s) 241, 1281
Eam1105I GACNNNNNGTC 1 cut(s) 223
EciI GGCGGA 4 cut(s) 33, 282, 304, 1133
Eco130I CCWWGG 2 cut(s) 602, 699
Eco24I GRGCYC 1 cut(s) 168
Eco47I GGWCC 3 cut(s) 248, 291, 599
Eco72I CACGTG 2 cut(s) 239, 282
EcoO109I RGGNCCY 1 cut(s) 599
EcoRII CCWGG 4 cut(s) 157, 549, 1212, 1222
EcoT14I CCWWGG 2 cut(s) 602, 699
EcoT22I ATGCAT 1 cut(s) 1092
EcoT38I GRGCYC 1 cut(s) 168
EgeI GGCGCC 1 cut(s) 153
EheI GGCGCC 1 cut(s) 153
ErhI CCWWGG 2 cut(s) 602, 699
FaeI CATG 4 cut(s) 406, 703, 1094, 1128
FalI AAGNNNNNCTT 4 cut(s) 17, 49, 1097, 1129
FaqI GGGAC 1 cut(s) 422
FatI CATG 4 cut(s) 402, 699, 1090, 1124
FauI CCCGC 4 cut(s) 41, 94, 155, 1076
FbaI TGATCA 1 cut(s) 588
FblI GTMKAC 3 cut(s) 9, 619, 913
Fnu4HI GCNGC 6 cut(s) 53, 155, 191, 207, 210, 1014
FokI GGATG 5 cut(s) 17, 521, 752, 1050, 1099
FriOI GRGCYC 1 cut(s) 168
Fsp4HI GCNGC 6 cut(s) 53, 155, 191, 207, 210, 1014
FspBI CTAG 1 cut(s) 896
GlaI GCGC 1 cut(s) 153
GluI GCNGC 6 cut(s) 53, 155, 191, 207, 210, 1014
GsaI CCCAGC 1 cut(s) 964
GsuI CTGGAG 1 cut(s) 910
HaeII RGCGCY 1 cut(s) 155
HaeIII GGCC 8 cut(s) 52, 222, 235, 243, 679, 1221, 1230, 1283
HapII CCGG 4 cut(s) 149, 244, 294, 791
HgaI GACGC 2 cut(s) 168, 439
HhaI GCGC 1 cut(s) 154
Hin1I GRCGYC 2 cut(s) 152, 179
Hin1II CATG 4 cut(s) 406, 703, 1094, 1128
Hin6I GCGC 1 cut(s) 152
HinP1I GCGC 1 cut(s) 152
HincII GTYRAC 1 cut(s) 426
HindII GTYRAC 1 cut(s) 426
HindIII AAGCTT 1 cut(s) 488
HinfI GANTC 3 cut(s) 73, 667, 1094
HpaII CCGG 4 cut(s) 149, 244, 294, 791
HphI GGTGA 1 cut(s) 584
Hpy166II GTNNAC 4 cut(s) 10, 426, 620, 914
Hpy188I TCNGA 8 cut(s) 61, 78, 252, 447, 484, 661, 1099, 1171
Hpy188III TCNNGA 3 cut(s) 37, 889, 1052
Hpy8I GTNNAC 4 cut(s) 10, 426, 620, 914
Hpy99I CGWCG 5 cut(s) 184, 221, 229, 232, 433
HpyAV CCTTC 3 cut(s) 73, 483, 590
HpyCH4III ACNGT 5 cut(s) 362, 413, 517, 772, 1141
HpyCH4IV ACGT 3 cut(s) 238, 281, 935
HpyCH4V TGCA 9 cut(s) 111, 391, 467, 821, 907, 1090, 1124, 1128, 1295
HpyF10VI GCNNNNNNNGC 6 cut(s) 123, 151, 163, 439, 635, 1227
HpyF3I CTNAG 3 cut(s) 186, 671, 777
HpySE526I ACGT 3 cut(s) 238, 281, 935
Hsp92I GRCGYC 2 cut(s) 152, 179
Hsp92II CATG 4 cut(s) 406, 703, 1094, 1128
HspAI GCGC 1 cut(s) 152
KasI GGCGCC 1 cut(s) 151
Ksp22I TGATCA 1 cut(s) 588
Kzo9I GATC 6 cut(s) 30, 588, 871, 964, 991, 1005
LmnI GCTCC 4 cut(s) 269, 399, 842, 891
Lsp1109I GCAGC 2 cut(s) 218, 1000
LweI GCATC 2 cut(s) 451, 1077
MaeI CTAG 1 cut(s) 896
MaeII ACGT 3 cut(s) 238, 281, 935
MaeIII GTNAC 3 cut(s) 772, 809, 1039
MalI GATC 6 cut(s) 32, 590, 873, 966, 993, 1007
MbiI CCGCTC 1 cut(s) 101
MboI GATC 6 cut(s) 30, 588, 871, 964, 991, 1005
MboII GAAGA 5 cut(s) 25, 334, 975, 1067, 1070
MflI RGATCY 2 cut(s) 30, 1005
MhlI GDGCHC 1 cut(s) 168
MluCI AATT 4 cut(s) 340, 558, 998, 1182
Mly113I GGCGCC 1 cut(s) 152
MlyI GAGTC 1 cut(s) 676
MmeI TCCRAC 3 cut(s) 84, 664, 820
MnlI CCTC 6 cut(s) 8, 290, 293, 430, 1157, 1167
Mph1103I ATGCAT 1 cut(s) 1092
MroXI GAANNNNTTC 1 cut(s) 257
MseI TTAA 4 cut(s) 561, 765, 804, 1001
MslI CAYNNNNRTG 2 cut(s) 447, 704
MspI CCGG 4 cut(s) 149, 244, 294, 791
MspR9I CCNGG 5 cut(s) 159, 245, 551, 1214, 1224
Mva1269I GAATGC 1 cut(s) 391
MvaI CCWGG 4 cut(s) 159, 551, 1214, 1224
MwoI GCNNNNNNNGC 6 cut(s) 123, 151, 163, 439, 635, 1227
NarI GGCGCC 1 cut(s) 152
NciI CCSGG 1 cut(s) 245
NcoI CCATGG 1 cut(s) 699
NdeII GATC 6 cut(s) 30, 588, 871, 964, 991, 1005
NlaIII CATG 4 cut(s) 406, 703, 1094, 1128
NlaIV GGNNCC 4 cut(s) 153, 234, 249, 893
NmuCI GTSAC 2 cut(s) 772, 809
NsiI ATGCAT 1 cut(s) 1092
NspI RCATGY 1 cut(s) 1128
NspV TTCGAA 2 cut(s) 275, 786
PaeI GCATGC 1 cut(s) 1128
PctI GAATGC 1 cut(s) 391
PdmI GAANNNNTTC 1 cut(s) 257
PfeI GAWTC 2 cut(s) 73, 1094
PkrI GCNGC 6 cut(s) 54, 156, 192, 208, 211, 1015
PleI GAGTC 1 cut(s) 675
PluTI GGCGCC 1 cut(s) 155
PmaCI CACGTG 2 cut(s) 239, 282
PmlI CACGTG 2 cut(s) 239, 282
PpsI GAGTC 1 cut(s) 675
Ppu21I YACGTR 2 cut(s) 239, 282
PpuMI RGGWCCY 1 cut(s) 599
PshBI ATTAAT 1 cut(s) 561
Psp5II RGGWCCY 1 cut(s) 599
Psp6I CCWGG 4 cut(s) 157, 549, 1212, 1222
PspCI CACGTG 2 cut(s) 239, 282
PspFI CCCAGC 1 cut(s) 960
PspGI CCWGG 4 cut(s) 157, 549, 1212, 1222
PspN4I GGNNCC 4 cut(s) 153, 234, 249, 893
PspPI GGNCC 8 cut(s) 50, 221, 233, 248, 291, 599, 677, 1220
PspPPI RGGWCCY 1 cut(s) 599
PstNI CAGNNNCTG 1 cut(s) 550
PsuI RGATCY 2 cut(s) 30, 1005
RsaI GTAC 1 cut(s) 733
RsaNI GTAC 1 cut(s) 732
RseI CAYNNNNRTG 2 cut(s) 447, 704
Rsr2I CGGWCCG 1 cut(s) 291
RsrII CGGWCCG 1 cut(s) 291
SaqAI TTAA 4 cut(s) 561, 765, 804, 1001
SatI GCNGC 6 cut(s) 53, 155, 191, 207, 210, 1014
Sau3AI GATC 6 cut(s) 30, 588, 871, 964, 991, 1005
Sau96I GGNCC 8 cut(s) 50, 221, 233, 248, 291, 599, 677, 1220
SchI GAGTC 1 cut(s) 676
ScrFI CCNGG 5 cut(s) 159, 245, 551, 1214, 1224
SduI GDGCHC 1 cut(s) 168
SfaNI GCATC 2 cut(s) 451, 1077
SfcI CTRYAG 1 cut(s) 361
SfiI GGCCNNNNNGGCC 1 cut(s) 1227
SfoI GGCGCC 1 cut(s) 153
SfuI TTCGAA 2 cut(s) 275, 786
SinI GGWCC 3 cut(s) 248, 291, 599
SmiMI CAYNNNNRTG 2 cut(s) 447, 704
SmlI CTYRAG 1 cut(s) 434
SmoI CTYRAG 1 cut(s) 434
SphI GCATGC 1 cut(s) 1128
Sse9I AATT 4 cut(s) 340, 558, 998, 1182
SspDI GGCGCC 1 cut(s) 151
SspMI CTAG 1 cut(s) 896
StyD4I CCNGG 5 cut(s) 157, 243, 549, 1212, 1222
StyI CCWWGG 2 cut(s) 602, 699
TaaI ACNGT 5 cut(s) 362, 413, 517, 772, 1141
TaiI ACGT 3 cut(s) 241, 284, 938
TaqI TCGA 2 cut(s) 275, 786
TasI AATT 4 cut(s) 340, 558, 998, 1182
TauI GCSGC 4 cut(s) 55, 157, 193, 212
TfiI GAWTC 2 cut(s) 73, 1094
Tru1I TTAA 4 cut(s) 561, 765, 804, 1001
Tru9I TTAA 4 cut(s) 561, 765, 804, 1001
TscAI CASTG 4 cut(s) 551, 598, 1144, 1246
TseFI GTSAC 2 cut(s) 772, 809
TseI GCWGC 2 cut(s) 206, 1013
Tsp45I GTSAC 2 cut(s) 772, 809
TspGWI ACGGA 3 cut(s) 27, 186, 940
TspRI CASTG 4 cut(s) 551, 598, 1144, 1246
VpaK11BI GGWCC 3 cut(s) 248, 291, 599
VspI ATTAAT 1 cut(s) 561
XapI RAATTY 1 cut(s) 1182
XceI RCATGY 1 cut(s) 1128
XcmI CCANNNNNNNNNTGG 1 cut(s) 1220
XmiI GTMKAC 3 cut(s) 9, 619, 913
XmnI GAANNNNTTC 1 cut(s) 257
XspI CTAG 1 cut(s) 896
Zsp2I ATGCAT 1 cut(s) 1092
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.