Signal recognition particle receptor subunit
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FAR1 | PF03101 | 40 - 125 | 5.2e-20 | FAR1 DNA-binding domain |
| ZSWIM1-3_RNaseH-like | PF21056 | 207 - 329 | 6.8e-12 | Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain |
| MULE | PF10551 | 246 - 340 | 1.5e-28 | MULE transposase domain |
| SWIM | PF04434 | 537 - 562 | 4.5e-08 | SWIM zinc finger |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 203, 281 |
| AccB1I | GGYRCC | 1 cut(s) | 1201 |
| AclWI | GGATC | 3 cut(s) | 938, 1587, 1617 |
| AcoI | YGGCCR | 2 cut(s) | 814, 2113 |
| AcsI | RAATTY | 9 cut(s) | 4, 92, 119, 212, 631, 1109, 1300, 1440, 1634 |
| AfaI | GTAC | 6 cut(s) | 47, 169, 1344, 1624, 2083, 2152 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 349, 711, 797 |
| AflII | CTTAAG | 2 cut(s) | 1150, 2042 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2194 |
| AjnI | CCWGG | 3 cut(s) | 176, 707, 904 |
| AleI | CACNNNNGTG | 1 cut(s) | 41 |
| AluBI | AGCT | 9 cut(s) | 146, 1005, 1080, 1149, 1491, 1877, 1921, 1972, 2237 |
| AluI | AGCT | 9 cut(s) | 146, 1005, 1080, 1149, 1491, 1877, 1921, 1972, 2237 |
| Alw26I | GTCTC | 1 cut(s) | 26 |
| AlwI | GGATC | 3 cut(s) | 938, 1587, 1617 |
| Ama87I | CYCGRG | 1 cut(s) | 1892 |
| AoxI | GGCC | 2 cut(s) | 814, 2113 |
| ApeKI | GCWGC | 3 cut(s) | 1002, 1751, 1972 |
| ApoI | RAATTY | 9 cut(s) | 4, 92, 119, 212, 631, 1109, 1300, 1440, 1634 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 198, 230 |
| AspS9I | GGNCC | 1 cut(s) | 1765 |
| AsuC2I | CCSGG | 1 cut(s) | 2141 |
| AsuHPI | GGTGA | 4 cut(s) | 331, 860, 1792, 1819 |
| AvaI | CYCGRG | 1 cut(s) | 1892 |
| AvaII | GGWCC | 1 cut(s) | 1765 |
| BalI | TGGCCA | 2 cut(s) | 816, 2115 |
| BanI | GGYRCC | 1 cut(s) | 1201 |
| BauI | CACGAG | 1 cut(s) | 1449 |
| BbsI | GAAGAC | 1 cut(s) | 666 |
| BbvCI | CCTCAGC | 1 cut(s) | 255 |
| BbvI | GCAGC | 3 cut(s) | 1014, 1738, 1959 |
| BccI | CCATC | 8 cut(s) | 182, 372, 409, 414, 581, 1158, 1725, 1766 |
| BceAI | ACGGC | 1 cut(s) | 2169 |
| BciT130I | CCWGG | 3 cut(s) | 178, 709, 906 |
| BclI | TGATCA | 2 cut(s) | 937, 1564 |
| BcnI | CCSGG | 1 cut(s) | 2141 |
| BcoDI | GTCTC | 1 cut(s) | 26 |
| BfaI | CTAG | 5 cut(s) | 104, 296, 324, 1310, 1769 |
| BfmI | CTRYAG | 1 cut(s) | 1755 |
| BfrI | CTTAAG | 2 cut(s) | 1150, 2042 |
| BglII | AGATCT | 1 cut(s) | 320 |
| BisI | GCNGC | 3 cut(s) | 1003, 1752, 1973 |
| BlsI | GCNGC | 3 cut(s) | 1004, 1753, 1974 |
| BmcAI | AGTACT | 1 cut(s) | 169 |
| Bme1390I | CCNGG | 4 cut(s) | 178, 709, 906, 2141 |
| Bme18I | GGWCC | 1 cut(s) | 1765 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2194 |
| BmeT110I | CYCGRG | 1 cut(s) | 1892 |
| BmgT120I | GGNCC | 1 cut(s) | 1765 |
| BmiI | GGNNCC | 2 cut(s) | 1203, 2203 |
| BmrFI | CCNGG | 4 cut(s) | 178, 709, 906, 2141 |
| BmsI | GCATC | 4 cut(s) | 688, 1057, 1202, 1372 |
| BpiI | GAAGAC | 1 cut(s) | 666 |
| BpmI | CTGGAG | 3 cut(s) | 363, 691, 2239 |
| Bpu10I | CCTNAGC | 1 cut(s) | 255 |
| BpuEI | CTTGAG | 1 cut(s) | 39 |
| BpuMI | CCSGG | 1 cut(s) | 2141 |
| BsaBI | GATNNNNATC | 2 cut(s) | 942, 1530 |
| BsaI | GGTCTC | 1 cut(s) | 26 |
| BsaJI | CCNNGG | 2 cut(s) | 441, 811 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 349, 711, 797 |
| Bse1I | ACTGG | 1 cut(s) | 2256 |
| Bse3DI | GCAATG | 2 cut(s) | 906, 963 |
| Bse8I | GATNNNNATC | 2 cut(s) | 942, 1530 |
| BseBI | CCWGG | 3 cut(s) | 178, 709, 906 |
| BseDI | CCNNGG | 2 cut(s) | 441, 811 |
| BseGI | GGATG | 7 cut(s) | 364, 401, 739, 1169, 1414, 1531, 2105 |
| BseJI | GATNNNNATC | 2 cut(s) | 942, 1530 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 349, 711, 797 |
| BseMI | GCAATG | 2 cut(s) | 906, 963 |
| BseMII | CTCAG | 3 cut(s) | 21, 269, 1892 |
| BseNI | ACTGG | 1 cut(s) | 2256 |
| BseRI | GAGGAG | 3 cut(s) | 42, 1156, 1401 |
| BseXI | GCAGC | 3 cut(s) | 1014, 1738, 1959 |
| BseYI | CCCAGC | 1 cut(s) | 146 |
| BshFI | GGCC | 2 cut(s) | 816, 2115 |
| BshNI | GGYRCC | 1 cut(s) | 1201 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1892 |
| BsiSI | CCGG | 1 cut(s) | 2141 |
| BslFI | GGGAC | 3 cut(s) | 594, 900, 2201 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 349, 711, 797 |
| BsmAI | GTCTC | 1 cut(s) | 26 |
| BsmFI | GGGAC | 3 cut(s) | 594, 900, 2201 |
| BsmI | GAATGC | 1 cut(s) | 839 |
| BsnI | GGCC | 2 cut(s) | 816, 2115 |
| Bso31I | GGTCTC | 1 cut(s) | 26 |
| BsoBI | CYCGRG | 1 cut(s) | 1892 |
| Bsp1407I | TGTACA | 2 cut(s) | 45, 1342 |
| Bsp143I | GATC | 6 cut(s) | 320, 937, 943, 1564, 1579, 1609 |
| Bsp19I | CCATGG | 2 cut(s) | 441, 811 |
| BspANI | GGCC | 2 cut(s) | 816, 2115 |
| BspCNI | CTCAG | 3 cut(s) | 22, 268, 1891 |
| BspLI | GGNNCC | 2 cut(s) | 1203, 2203 |
| BspPI | GGATC | 3 cut(s) | 938, 1587, 1617 |
| BspQI | GCTCTTC | 1 cut(s) | 1386 |
| BspT107I | GGYRCC | 1 cut(s) | 1201 |
| BspTI | CTTAAG | 2 cut(s) | 1150, 2042 |
| BspTNI | GGTCTC | 1 cut(s) | 26 |
| BsrDI | GCAATG | 2 cut(s) | 906, 963 |
| BsrGI | TGTACA | 2 cut(s) | 45, 1342 |
| BsrI | ACTGG | 1 cut(s) | 2256 |
| BssECI | CCNNGG | 2 cut(s) | 441, 811 |
| BssMI | GATC | 6 cut(s) | 320, 937, 943, 1564, 1579, 1609 |
| BssSI | CACGAG | 1 cut(s) | 1449 |
| BssT1I | CCWWGG | 2 cut(s) | 441, 811 |
| Bst2BI | CACGAG | 1 cut(s) | 1449 |
| Bst2UI | CCWGG | 3 cut(s) | 178, 709, 906 |
| Bst4CI | ACNGT | 1 cut(s) | 1214 |
| Bst6I | CTCTTC | 5 cut(s) | 311, 550, 564, 1386, 1721 |
| BstAFI | CTTAAG | 2 cut(s) | 1150, 2042 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 305, 1751 |
| BstAUI | TGTACA | 2 cut(s) | 45, 1342 |
| BstC8I | GCNNGC | 3 cut(s) | 78, 1007, 1206 |
| BstDEI | CTNAG | 6 cut(s) | 30, 255, 844, 892, 1878, 2147 |
| BstDSI | CCRYGG | 2 cut(s) | 441, 811 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 709 |
| BstF5I | GGATG | 7 cut(s) | 364, 401, 739, 1169, 1414, 1531, 2105 |
| BstKTI | GATC | 6 cut(s) | 323, 940, 946, 1567, 1582, 1612 |
| BstMAI | GTCTC | 1 cut(s) | 26 |
| BstMBI | GATC | 6 cut(s) | 320, 937, 943, 1564, 1579, 1609 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 143, 305, 1751, 1918 |
| BstNI | CCWGG | 3 cut(s) | 178, 709, 906 |
| BstNSI | RCATGY | 1 cut(s) | 1458 |
| BstSCI | CCNGG | 4 cut(s) | 176, 707, 904, 2139 |
| BstSFI | CTRYAG | 1 cut(s) | 1755 |
| BstV1I | GCAGC | 3 cut(s) | 1014, 1738, 1959 |
| BstV2I | GAAGAC | 1 cut(s) | 666 |
| BstX2I | RGATCY | 3 cut(s) | 320, 943, 1609 |
| BstYI | RGATCY | 3 cut(s) | 320, 943, 1609 |
| BsuRI | GGCC | 2 cut(s) | 816, 2115 |
| BtgI | CCRYGG | 2 cut(s) | 441, 811 |
| BtsCI | GGATG | 7 cut(s) | 364, 401, 739, 1169, 1414, 1531, 2105 |
| Cac8I | GCNNGC | 3 cut(s) | 78, 1007, 1206 |
| Cfr13I | GGNCC | 1 cut(s) | 1765 |
| Csp6I | GTAC | 6 cut(s) | 46, 168, 1343, 1623, 2082, 2151 |
| CviQI | GTAC | 6 cut(s) | 46, 168, 1343, 1623, 2082, 2151 |
| DdeI | CTNAG | 6 cut(s) | 30, 255, 844, 892, 1878, 2147 |
| DpnI | GATC | 6 cut(s) | 322, 939, 945, 1566, 1581, 1611 |
| DpnII | GATC | 6 cut(s) | 320, 937, 943, 1564, 1579, 1609 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2194 |
| EaeI | YGGCCR | 2 cut(s) | 814, 2113 |
| Eam1104I | CTCTTC | 5 cut(s) | 311, 550, 564, 1386, 1721 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2194 |
| EarI | CTCTTC | 5 cut(s) | 311, 550, 564, 1386, 1721 |
| Eco130I | CCWWGG | 2 cut(s) | 441, 811 |
| Eco31I | GGTCTC | 1 cut(s) | 26 |
| Eco47I | GGWCC | 1 cut(s) | 1765 |
| Eco88I | CYCGRG | 1 cut(s) | 1892 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 709 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1765 |
| EcoRI | GAATTC | 1 cut(s) | 631 |
| EcoRII | CCWGG | 3 cut(s) | 176, 707, 904 |
| EcoT14I | CCWWGG | 2 cut(s) | 441, 811 |
| EcoT22I | ATGCAT | 1 cut(s) | 1801 |
| ErhI | CCWWGG | 2 cut(s) | 441, 811 |
| FaqI | GGGAC | 3 cut(s) | 594, 900, 2201 |
| FauNDI | CATATG | 1 cut(s) | 1605 |
| FbaI | TGATCA | 2 cut(s) | 937, 1564 |
| Fnu4HI | GCNGC | 3 cut(s) | 1003, 1752, 1973 |
| FokI | GGATG | 7 cut(s) | 351, 388, 746, 1176, 1401, 1538, 2112 |
| Fsp4HI | GCNGC | 3 cut(s) | 1003, 1752, 1973 |
| FspBI | CTAG | 5 cut(s) | 104, 296, 324, 1310, 1769 |
| GluI | GCNGC | 3 cut(s) | 1003, 1752, 1973 |
| GsaI | CCCAGC | 1 cut(s) | 150 |
| GsuI | CTGGAG | 3 cut(s) | 363, 691, 2239 |
| HaeIII | GGCC | 2 cut(s) | 816, 2115 |
| HapII | CCGG | 1 cut(s) | 2141 |
| HincII | GTYRAC | 2 cut(s) | 805, 1291 |
| HindII | GTYRAC | 2 cut(s) | 805, 1291 |
| HpaI | GTTAAC | 1 cut(s) | 805 |
| HpaII | CCGG | 1 cut(s) | 2141 |
| HphI | GGTGA | 4 cut(s) | 331, 860, 1792, 1819 |
| Hpy166II | GTNNAC | 4 cut(s) | 46, 48, 805, 1291 |
| Hpy188I | TCNGA | 7 cut(s) | 16, 162, 196, 1030, 1096, 1569, 1881 |
| Hpy8I | GTNNAC | 4 cut(s) | 46, 48, 805, 1291 |
| HpyAV | CCTTC | 6 cut(s) | 224, 571, 1120, 1640, 2017, 2272 |
| HpyCH4III | ACNGT | 1 cut(s) | 1214 |
| HpyCH4IV | ACGT | 2 cut(s) | 1252, 1351 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 143, 305, 1751, 1918 |
| HpyF3I | CTNAG | 6 cut(s) | 30, 255, 844, 892, 1878, 2147 |
| HpySE526I | ACGT | 2 cut(s) | 1252, 1351 |
| Ksp22I | TGATCA | 2 cut(s) | 937, 1564 |
| KspAI | GTTAAC | 1 cut(s) | 805 |
| Kzo9I | GATC | 6 cut(s) | 320, 937, 943, 1564, 1579, 1609 |
| LguI | GCTCTTC | 1 cut(s) | 1386 |
| Lsp1109I | GCAGC | 3 cut(s) | 1014, 1738, 1959 |
| LweI | GCATC | 4 cut(s) | 688, 1057, 1202, 1372 |
| MaeI | CTAG | 5 cut(s) | 104, 296, 324, 1310, 1769 |
| MaeII | ACGT | 2 cut(s) | 1252, 1351 |
| MaeIII | GTNAC | 3 cut(s) | 337, 396, 1154 |
| MalI | GATC | 6 cut(s) | 322, 939, 945, 1566, 1581, 1611 |
| MboI | GATC | 6 cut(s) | 320, 937, 943, 1564, 1579, 1609 |
| MfeI | CAATTG | 1 cut(s) | 1400 |
| MflI | RGATCY | 3 cut(s) | 320, 943, 1609 |
| MlsI | TGGCCA | 2 cut(s) | 816, 2115 |
| MluNI | TGGCCA | 2 cut(s) | 816, 2115 |
| MlyI | GAGTC | 3 cut(s) | 872, 2204, 2246 |
| MmeI | TCCRAC | 1 cut(s) | 1486 |
| Mox20I | TGGCCA | 2 cut(s) | 816, 2115 |
| Mph1103I | ATGCAT | 1 cut(s) | 1801 |
| MscI | TGGCCA | 2 cut(s) | 816, 2115 |
| MseI | TTAA | 8 cut(s) | 437, 804, 1016, 1151, 1329, 1761, 2043, 2284 |
| MslI | CAYNNNNRTG | 3 cut(s) | 41, 1380, 2100 |
| Msp20I | TGGCCA | 2 cut(s) | 816, 2115 |
| MspA1I | CMGCKG | 2 cut(s) | 1005, 2237 |
| MspCI | CTTAAG | 2 cut(s) | 1150, 2042 |
| MspI | CCGG | 1 cut(s) | 2141 |
| MspR9I | CCNGG | 4 cut(s) | 178, 709, 906, 2141 |
| MunI | CAATTG | 1 cut(s) | 1400 |
| Mva1269I | GAATGC | 1 cut(s) | 839 |
| MvaI | CCWGG | 3 cut(s) | 178, 709, 906 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 143, 305, 1751, 1918 |
| NciI | CCSGG | 1 cut(s) | 2141 |
| NcoI | CCATGG | 2 cut(s) | 441, 811 |
| NdeI | CATATG | 1 cut(s) | 1605 |
| NdeII | GATC | 6 cut(s) | 320, 937, 943, 1564, 1579, 1609 |
| NlaIV | GGNNCC | 2 cut(s) | 1203, 2203 |
| NmeAIII | GCCGAG | 1 cut(s) | 1208 |
| NmuCI | GTSAC | 2 cut(s) | 337, 1154 |
| NsiI | ATGCAT | 1 cut(s) | 1801 |
| NspI | RCATGY | 1 cut(s) | 1458 |
| OliI | CACNNNNGTG | 1 cut(s) | 41 |
| PaeR7I | CTCGAG | 1 cut(s) | 1892 |
| PciSI | GCTCTTC | 1 cut(s) | 1386 |
| PctI | GAATGC | 1 cut(s) | 839 |
| PfeI | GAWTC | 7 cut(s) | 17, 675, 854, 1321, 1424, 1570, 1650 |
| PflFI | GACNNNGTC | 1 cut(s) | 1853 |
| PfoI | TCCNGGA | 1 cut(s) | 707 |
| PkrI | GCNGC | 3 cut(s) | 1004, 1753, 1974 |
| PleI | GAGTC | 3 cut(s) | 871, 2203, 2246 |
| PpsI | GAGTC | 3 cut(s) | 871, 2203, 2246 |
| PpuMI | RGGWCCY | 1 cut(s) | 1765 |
| PsiI | TTATAA | 2 cut(s) | 203, 281 |
| Psp5II | RGGWCCY | 1 cut(s) | 1765 |
| Psp6I | CCWGG | 3 cut(s) | 176, 707, 904 |
| PspFI | CCCAGC | 1 cut(s) | 146 |
| PspGI | CCWGG | 3 cut(s) | 176, 707, 904 |
| PspN4I | GGNNCC | 2 cut(s) | 1203, 2203 |
| PspPI | GGNCC | 1 cut(s) | 1765 |
| PspPPI | RGGWCCY | 1 cut(s) | 1765 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 175, 207 |
| PsuI | RGATCY | 3 cut(s) | 320, 943, 1609 |
| PsyI | GACNNNGTC | 1 cut(s) | 1853 |
| PvuII | CAGCTG | 2 cut(s) | 1005, 2237 |
| RsaI | GTAC | 6 cut(s) | 47, 169, 1344, 1624, 2083, 2152 |
| RsaNI | GTAC | 6 cut(s) | 46, 168, 1343, 1623, 2082, 2151 |
| RseI | CAYNNNNRTG | 3 cut(s) | 41, 1380, 2100 |
| SapI | GCTCTTC | 1 cut(s) | 1386 |
| SaqAI | TTAA | 8 cut(s) | 437, 804, 1016, 1151, 1329, 1761, 2043, 2284 |
| SatI | GCNGC | 3 cut(s) | 1003, 1752, 1973 |
| Sau3AI | GATC | 6 cut(s) | 320, 937, 943, 1564, 1579, 1609 |
| Sau96I | GGNCC | 1 cut(s) | 1765 |
| ScaI | AGTACT | 1 cut(s) | 169 |
| SchI | GAGTC | 3 cut(s) | 872, 2204, 2246 |
| ScrFI | CCNGG | 4 cut(s) | 178, 709, 906, 2141 |
| SfaNI | GCATC | 4 cut(s) | 688, 1057, 1202, 1372 |
| SfcI | CTRYAG | 1 cut(s) | 1755 |
| Sfr274I | CTCGAG | 1 cut(s) | 1892 |
| SinI | GGWCC | 1 cut(s) | 1765 |
| SlaI | CTCGAG | 1 cut(s) | 1892 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 41, 1380, 2100 |
| SmlI | CTYRAG | 4 cut(s) | 54, 1150, 1892, 2042 |
| SmoI | CTYRAG | 4 cut(s) | 54, 1150, 1892, 2042 |
| SspI | AATATT | 1 cut(s) | 463 |
| SspMI | CTAG | 5 cut(s) | 104, 296, 324, 1310, 1769 |
| StyD4I | CCNGG | 4 cut(s) | 176, 707, 904, 2139 |
| StyI | CCWWGG | 2 cut(s) | 441, 811 |
| TaaI | ACNGT | 1 cut(s) | 1214 |
| TaiI | ACGT | 2 cut(s) | 1255, 1354 |
| TaqI | TCGA | 3 cut(s) | 1189, 1893, 2265 |
| TatI | WGTACW | 5 cut(s) | 45, 167, 1342, 1622, 2081 |
| TfiI | GAWTC | 7 cut(s) | 17, 675, 854, 1321, 1424, 1570, 1650 |
| Tru1I | TTAA | 8 cut(s) | 437, 804, 1016, 1151, 1329, 1761, 2043, 2284 |
| Tru9I | TTAA | 8 cut(s) | 437, 804, 1016, 1151, 1329, 1761, 2043, 2284 |
| TseFI | GTSAC | 2 cut(s) | 337, 1154 |
| TseI | GCWGC | 3 cut(s) | 1002, 1751, 1972 |
| Tsp45I | GTSAC | 2 cut(s) | 337, 1154 |
| TspGWI | ACGGA | 2 cut(s) | 283, 365 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1853 |
| Vha464I | CTTAAG | 2 cut(s) | 1150, 2042 |
| VpaK11BI | GGWCC | 1 cut(s) | 1765 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 709 |
| XapI | RAATTY | 9 cut(s) | 4, 92, 119, 212, 631, 1109, 1300, 1440, 1634 |
| XceI | RCATGY | 1 cut(s) | 1458 |
| XhoI | CTCGAG | 1 cut(s) | 1892 |
| XspI | CTAG | 5 cut(s) | 104, 296, 324, 1310, 1769 |
| ZrmI | AGTACT | 1 cut(s) | 169 |
| Zsp2I | ATGCAT | 1 cut(s) | 1801 |