proline--tRNA ligase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 6 - 95 | 3.7e-23 | Rx N-terminal domain |
| NB-ARC | PF00931 | 184 - 353 | 4.9e-34 | NB-ARC domain |
| WHD_DRP | PF23559 | 441 - 512 | 1.7e-22 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 562 - 908 | 7.4e-28 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 562 - 618 | 4.6e-08 | Leucine rich repeat |
| LRR_4 | PF12799 | 584 - 624 | 3.4e-06 | Leucine Rich repeats (2 copies) |
| LRR_8 | PF13855 | 585 - 639 | 1.5e-07 | Leucine rich repeat |
| LRR_R13L1-DRL21 | PF25019 | 703 - 837 | 1.7e-25 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 450 |
| Acc16I | TGCGCA | 2 cut(s) | 1688, 2756 |
| Acc36I | ACCTGC | 1 cut(s) | 952 |
| AccB1I | GGYRCC | 1 cut(s) | 920 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 61 |
| AccI | GTMKAC | 2 cut(s) | 1162, 2784 |
| AccII | CGCG | 1 cut(s) | 952 |
| AciI | CCGC | 3 cut(s) | 149, 1286, 1453 |
| AclI | AACGTT | 1 cut(s) | 1297 |
| AclWI | GGATC | 1 cut(s) | 2402 |
| AcsI | RAATTY | 7 cut(s) | 473, 936, 1223, 1768, 1937, 2711, 2876 |
| AcuI | CTGAAG | 3 cut(s) | 27, 743, 2236 |
| AfaI | GTAC | 4 cut(s) | 221, 303, 732, 2737 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 61, 1858, 2872 |
| AgeI | ACCGGT | 1 cut(s) | 2036 |
| AhlI | ACTAGT | 1 cut(s) | 986 |
| AjiI | CACGTC | 1 cut(s) | 2854 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1245, 1277 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 827, 859 |
| AluBI | AGCT | 9 cut(s) | 140, 422, 556, 1700, 1966, 2050, 2368, 2428, 2452 |
| AluI | AGCT | 9 cut(s) | 140, 422, 556, 1700, 1966, 2050, 2368, 2428, 2452 |
| Alw21I | GWGCWC | 1 cut(s) | 254 |
| Alw26I | GTCTC | 5 cut(s) | 70, 181, 531, 721, 1848 |
| AlwI | GGATC | 1 cut(s) | 2402 |
| AoxI | GGCC | 3 cut(s) | 177, 2290, 2838 |
| ApeKI | GCWGC | 4 cut(s) | 1142, 2320, 2452, 2740 |
| ApoI | RAATTY | 7 cut(s) | 473, 936, 1223, 1768, 1937, 2711, 2876 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1753, 1785 |
| AsiGI | ACCGGT | 1 cut(s) | 2036 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 132, 2876 |
| AspLEI | GCGC | 3 cut(s) | 961, 1689, 2757 |
| AspS9I | GGNCC | 5 cut(s) | 1649, 1998, 2290, 2462, 2838 |
| AsuC2I | CCSGG | 2 cut(s) | 1605, 2816 |
| AsuHPI | GGTGA | 5 cut(s) | 299, 1031, 1079, 1619, 2093 |
| AvaII | GGWCC | 3 cut(s) | 1649, 1998, 2462 |
| AxyI | CCTNAGG | 3 cut(s) | 925, 1644, 1757 |
| BanI | GGYRCC | 1 cut(s) | 920 |
| BanII | GRGCYC | 1 cut(s) | 897 |
| BbsI | GAAGAC | 2 cut(s) | 1154, 2574 |
| Bbv12I | GWGCWC | 1 cut(s) | 254 |
| BbvI | GCAGC | 4 cut(s) | 1129, 2307, 2439, 2727 |
| BccI | CCATC | 5 cut(s) | 53, 761, 1058, 2360, 2503 |
| BceAI | ACGGC | 1 cut(s) | 2464 |
| BciVI | GTATCC | 1 cut(s) | 28 |
| BcnI | CCSGG | 2 cut(s) | 1605, 2816 |
| BcoDI | GTCTC | 5 cut(s) | 70, 181, 531, 721, 1848 |
| BcuI | ACTAGT | 1 cut(s) | 986 |
| BfaI | CTAG | 8 cut(s) | 557, 659, 857, 969, 987, 1719, 2051, 2237 |
| BfmI | CTRYAG | 1 cut(s) | 2768 |
| BfuAI | ACCTGC | 1 cut(s) | 952 |
| BfuI | GTATCC | 1 cut(s) | 28 |
| BisI | GCNGC | 4 cut(s) | 1143, 2321, 2453, 2741 |
| BlsI | GCNGC | 4 cut(s) | 1144, 2322, 2454, 2742 |
| Bme1390I | CCNGG | 2 cut(s) | 1605, 2816 |
| Bme18I | GGWCC | 3 cut(s) | 1649, 1998, 2462 |
| BmgBI | CACGTC | 1 cut(s) | 2854 |
| BmgT120I | GGNCC | 5 cut(s) | 1649, 1998, 2290, 2462, 2838 |
| BmiI | GGNNCC | 7 cut(s) | 43, 894, 922, 1650, 1999, 2291, 2463 |
| BmrFI | CCNGG | 2 cut(s) | 1605, 2816 |
| BmrI | ACTGGG | 1 cut(s) | 2647 |
| BmsI | GCATC | 3 cut(s) | 142, 1990, 2167 |
| BmuI | ACTGGG | 1 cut(s) | 2647 |
| BpiI | GAAGAC | 2 cut(s) | 1154, 2574 |
| BpmI | CTGGAG | 2 cut(s) | 1880, 2600 |
| BpuEI | CTTGAG | 1 cut(s) | 2444 |
| BpuMI | CCSGG | 2 cut(s) | 1605, 2816 |
| BsaJI | CCNNGG | 1 cut(s) | 1548 |
| BsaWI | WCCGGW | 1 cut(s) | 2036 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 61, 1858, 2872 |
| Bse118I | RCCGGY | 1 cut(s) | 2036 |
| Bse1I | ACTGG | 4 cut(s) | 565, 1863, 2617, 2642 |
| Bse21I | CCTNAGG | 3 cut(s) | 925, 1644, 1757 |
| Bse3DI | GCAATG | 4 cut(s) | 384, 981, 1050, 1962 |
| BseDI | CCNNGG | 1 cut(s) | 1548 |
| BseGI | GGATG | 9 cut(s) | 157, 753, 1354, 1374, 1558, 2264, 2352, 2514, 2862 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 61, 1858, 2872 |
| BseMI | GCAATG | 4 cut(s) | 384, 981, 1050, 1962 |
| BseMII | CTCAG | 6 cut(s) | 377, 513, 732, 939, 1635, 2815 |
| BseNI | ACTGG | 4 cut(s) | 565, 1863, 2617, 2642 |
| BseRI | GAGGAG | 4 cut(s) | 175, 2563, 2566, 2846 |
| BseXI | GCAGC | 4 cut(s) | 1129, 2307, 2439, 2727 |
| BsgI | GTGCAG | 1 cut(s) | 1942 |
| Bsh1236I | CGCG | 1 cut(s) | 952 |
| BshFI | GGCC | 3 cut(s) | 179, 2292, 2840 |
| BshNI | GGYRCC | 1 cut(s) | 920 |
| BshTI | ACCGGT | 1 cut(s) | 2036 |
| BsiHKAI | GWGCWC | 1 cut(s) | 254 |
| BsiSI | CCGG | 3 cut(s) | 1604, 2037, 2815 |
| BsiWI | CGTACG | 1 cut(s) | 219 |
| BslFI | GGGAC | 4 cut(s) | 884, 2110, 2831, 2840 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 61, 1858, 2872 |
| BsmAI | GTCTC | 5 cut(s) | 70, 181, 531, 721, 1848 |
| BsmBI | CGTCTC | 1 cut(s) | 181 |
| BsmFI | GGGAC | 4 cut(s) | 884, 2110, 2831, 2840 |
| BsmI | GAATGC | 1 cut(s) | 1562 |
| BsnI | GGCC | 3 cut(s) | 179, 2292, 2840 |
| Bsp1286I | GDGCHC | 2 cut(s) | 254, 897 |
| Bsp1407I | TGTACA | 1 cut(s) | 730 |
| Bsp143I | GATC | 2 cut(s) | 1330, 2394 |
| BspACI | CCGC | 3 cut(s) | 149, 1286, 1453 |
| BspANI | GGCC | 3 cut(s) | 179, 2292, 2840 |
| BspCNI | CTCAG | 6 cut(s) | 376, 514, 731, 938, 1636, 2814 |
| BspFNI | CGCG | 1 cut(s) | 952 |
| BspHI | TCATGA | 2 cut(s) | 430, 2628 |
| BspLI | GGNNCC | 7 cut(s) | 43, 894, 922, 1650, 1999, 2291, 2463 |
| BspMI | ACCTGC | 1 cut(s) | 952 |
| BspPI | GGATC | 1 cut(s) | 2402 |
| BspT107I | GGYRCC | 1 cut(s) | 920 |
| BsrDI | GCAATG | 4 cut(s) | 384, 981, 1050, 1962 |
| BsrFI | RCCGGY | 1 cut(s) | 2036 |
| BsrGI | TGTACA | 1 cut(s) | 730 |
| BsrI | ACTGG | 4 cut(s) | 565, 1863, 2617, 2642 |
| BssAI | RCCGGY | 1 cut(s) | 2036 |
| BssECI | CCNNGG | 1 cut(s) | 1548 |
| BssMI | GATC | 2 cut(s) | 1330, 2394 |
| BssT1I | CCWWGG | 1 cut(s) | 1548 |
| Bst4CI | ACNGT | 9 cut(s) | 287, 742, 1170, 1183, 1257, 1676, 1853, 1877, 2789 |
| Bst6I | CTCTTC | 3 cut(s) | 1224, 1944, 2637 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1906 |
| BstAUI | TGTACA | 1 cut(s) | 730 |
| BstC8I | GCNNGC | 4 cut(s) | 147, 194, 2366, 2370 |
| BstF5I | GGATG | 9 cut(s) | 157, 753, 1354, 1374, 1558, 2264, 2352, 2514, 2862 |
| BstFNI | CGCG | 1 cut(s) | 952 |
| BstHHI | GCGC | 3 cut(s) | 961, 1689, 2757 |
| BstKTI | GATC | 2 cut(s) | 1333, 2397 |
| BstMAI | GTCTC | 5 cut(s) | 70, 181, 531, 721, 1848 |
| BstMBI | GATC | 2 cut(s) | 1330, 2394 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 146, 659, 958, 965, 1906 |
| BstNSI | RCATGY | 1 cut(s) | 2202 |
| BstSCI | CCNGG | 2 cut(s) | 1603, 2814 |
| BstSFI | CTRYAG | 1 cut(s) | 2768 |
| BstUI | CGCG | 1 cut(s) | 952 |
| BstV1I | GCAGC | 4 cut(s) | 1129, 2307, 2439, 2727 |
| BstV2I | GAAGAC | 2 cut(s) | 1154, 2574 |
| BstX2I | RGATCY | 1 cut(s) | 2394 |
| BstYI | RGATCY | 1 cut(s) | 2394 |
| Bsu36I | CCTNAGG | 3 cut(s) | 925, 1644, 1757 |
| BsuI | GTATCC | 1 cut(s) | 28 |
| BsuRI | GGCC | 3 cut(s) | 179, 2292, 2840 |
| BtrI | CACGTC | 1 cut(s) | 2854 |
| BtsCI | GGATG | 9 cut(s) | 157, 753, 1354, 1374, 1558, 2264, 2352, 2514, 2862 |
| BtsI | GCAGTG | 1 cut(s) | 1930 |
| BtsIMutI | CAGTG | 3 cut(s) | 252, 1188, 1930 |
| BveI | ACCTGC | 1 cut(s) | 952 |
| Cac8I | GCNNGC | 4 cut(s) | 147, 194, 2366, 2370 |
| CciI | TCATGA | 2 cut(s) | 430, 2628 |
| CfoI | GCGC | 3 cut(s) | 961, 1689, 2757 |
| Cfr10I | RCCGGY | 1 cut(s) | 2036 |
| Cfr13I | GGNCC | 5 cut(s) | 1649, 1998, 2290, 2462, 2838 |
| CseI | GACGC | 1 cut(s) | 198 |
| Csp6I | GTAC | 4 cut(s) | 220, 302, 731, 2736 |
| CspAI | ACCGGT | 1 cut(s) | 2036 |
| CviAII | CATG | 9 cut(s) | 431, 485, 914, 1274, 1526, 2199, 2247, 2330, 2629 |
| CviQI | GTAC | 4 cut(s) | 220, 302, 731, 2736 |
| DpnI | GATC | 2 cut(s) | 1332, 2396 |
| DpnII | GATC | 2 cut(s) | 1330, 2394 |
| Eam1104I | CTCTTC | 3 cut(s) | 1224, 1944, 2637 |
| EarI | CTCTTC | 3 cut(s) | 1224, 1944, 2637 |
| EciI | GGCGGA | 1 cut(s) | 164 |
| Eco130I | CCWWGG | 1 cut(s) | 1548 |
| Eco24I | GRGCYC | 1 cut(s) | 897 |
| Eco32I | GATATC | 1 cut(s) | 1832 |
| Eco47I | GGWCC | 3 cut(s) | 1649, 1998, 2462 |
| Eco57I | CTGAAG | 3 cut(s) | 27, 743, 2236 |
| Eco81I | CCTNAGG | 3 cut(s) | 925, 1644, 1757 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1998 |
| EcoRI | GAATTC | 1 cut(s) | 2876 |
| EcoRV | GATATC | 1 cut(s) | 1832 |
| EcoT14I | CCWWGG | 1 cut(s) | 1548 |
| EcoT38I | GRGCYC | 1 cut(s) | 897 |
| ErhI | CCWWGG | 1 cut(s) | 1548 |
| Esp3I | CGTCTC | 1 cut(s) | 181 |
| FaeI | CATG | 9 cut(s) | 434, 488, 917, 1277, 1529, 2202, 2250, 2333, 2632 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 741, 773, 2130, 2162 |
| FaqI | GGGAC | 4 cut(s) | 884, 2110, 2831, 2840 |
| FatI | CATG | 9 cut(s) | 430, 484, 913, 1273, 1525, 2198, 2246, 2329, 2628 |
| FblI | GTMKAC | 2 cut(s) | 1162, 2784 |
| Fnu4HI | GCNGC | 4 cut(s) | 1143, 2321, 2453, 2741 |
| FokI | GGATG | 9 cut(s) | 164, 740, 1361, 1381, 1565, 2271, 2339, 2521, 2849 |
| FriOI | GRGCYC | 1 cut(s) | 897 |
| Fsp4HI | GCNGC | 4 cut(s) | 1143, 2321, 2453, 2741 |
| FspBI | CTAG | 8 cut(s) | 557, 659, 857, 969, 987, 1719, 2051, 2237 |
| FspI | TGCGCA | 2 cut(s) | 1688, 2756 |
| GlaI | GCGC | 3 cut(s) | 960, 1688, 2756 |
| GluI | GCNGC | 4 cut(s) | 1143, 2321, 2453, 2741 |
| GsuI | CTGGAG | 2 cut(s) | 1880, 2600 |
| HaeIII | GGCC | 3 cut(s) | 179, 2292, 2840 |
| HapII | CCGG | 3 cut(s) | 1604, 2037, 2815 |
| HgaI | GACGC | 1 cut(s) | 198 |
| HhaI | GCGC | 3 cut(s) | 961, 1689, 2757 |
| Hin1II | CATG | 9 cut(s) | 434, 488, 917, 1277, 1529, 2202, 2250, 2333, 2632 |
| Hin6I | GCGC | 3 cut(s) | 959, 1687, 2755 |
| HinP1I | GCGC | 3 cut(s) | 959, 1687, 2755 |
| HincII | GTYRAC | 1 cut(s) | 2034 |
| HindII | GTYRAC | 1 cut(s) | 2034 |
| HpaI | GTTAAC | 1 cut(s) | 2034 |
| HpaII | CCGG | 3 cut(s) | 1604, 2037, 2815 |
| HphI | GGTGA | 5 cut(s) | 299, 1031, 1079, 1619, 2093 |
| Hpy166II | GTNNAC | 6 cut(s) | 241, 1163, 1856, 1928, 2034, 2785 |
| Hpy188I | TCNGA | 8 cut(s) | 7, 366, 523, 721, 2415, 2673, 2804, 2882 |
| Hpy8I | GTNNAC | 6 cut(s) | 241, 1163, 1856, 1928, 2034, 2785 |
| Hpy99I | CGWCG | 2 cut(s) | 381, 2485 |
| HpyCH4III | ACNGT | 9 cut(s) | 287, 742, 1170, 1183, 1257, 1676, 1853, 1877, 2789 |
| HpyCH4IV | ACGT | 5 cut(s) | 72, 183, 1297, 2099, 2853 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 146, 659, 958, 965, 1906 |
| HpySE526I | ACGT | 5 cut(s) | 72, 183, 1297, 2099, 2853 |
| Hsp92II | CATG | 9 cut(s) | 434, 488, 917, 1277, 1529, 2202, 2250, 2333, 2632 |
| HspAI | GCGC | 3 cut(s) | 959, 1687, 2755 |
| KspAI | GTTAAC | 1 cut(s) | 2034 |
| Kzo9I | GATC | 2 cut(s) | 1330, 2394 |
| LmnI | GCTCC | 2 cut(s) | 249, 892 |
| Lsp1109I | GCAGC | 4 cut(s) | 1129, 2307, 2439, 2727 |
| LweI | GCATC | 3 cut(s) | 142, 1990, 2167 |
| MaeI | CTAG | 8 cut(s) | 557, 659, 857, 969, 987, 1719, 2051, 2237 |
| MaeII | ACGT | 5 cut(s) | 72, 183, 1297, 2099, 2853 |
| MaeIII | GTNAC | 7 cut(s) | 358, 380, 943, 989, 1268, 1371, 1599 |
| MalI | GATC | 2 cut(s) | 1332, 2396 |
| MboI | GATC | 2 cut(s) | 1330, 2394 |
| MfeI | CAATTG | 1 cut(s) | 507 |
| MflI | RGATCY | 1 cut(s) | 2394 |
| MhlI | GDGCHC | 2 cut(s) | 254, 897 |
| MlyI | GAGTC | 7 cut(s) | 794, 818, 866, 1088, 2152, 2174, 2820 |
| MmeI | TCCRAC | 2 cut(s) | 79, 1276 |
| MroXI | GAANNNNTTC | 2 cut(s) | 132, 2876 |
| MseI | TTAA | 9 cut(s) | 768, 831, 1437, 1497, 1544, 1575, 1631, 1976, 2033 |
| MslI | CAYNNNNRTG | 5 cut(s) | 389, 918, 1986, 2067, 2867 |
| MspA1I | CMGCKG | 1 cut(s) | 2368 |
| MspI | CCGG | 3 cut(s) | 1604, 2037, 2815 |
| MspR9I | CCNGG | 2 cut(s) | 1605, 2816 |
| MunI | CAATTG | 1 cut(s) | 507 |
| Mva1269I | GAATGC | 1 cut(s) | 1562 |
| MvnI | CGCG | 1 cut(s) | 952 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 146, 659, 958, 965, 1906 |
| NciI | CCSGG | 2 cut(s) | 1605, 2816 |
| NdeII | GATC | 2 cut(s) | 1330, 2394 |
| NlaIII | CATG | 9 cut(s) | 434, 488, 917, 1277, 1529, 2202, 2250, 2333, 2632 |
| NlaIV | GGNNCC | 7 cut(s) | 43, 894, 922, 1650, 1999, 2291, 2463 |
| NmuCI | GTSAC | 4 cut(s) | 358, 380, 989, 1371 |
| NsbI | TGCGCA | 2 cut(s) | 1688, 2756 |
| NspI | RCATGY | 1 cut(s) | 2202 |
| PagI | TCATGA | 2 cut(s) | 430, 2628 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 228 |
| PctI | GAATGC | 1 cut(s) | 1562 |
| PdmI | GAANNNNTTC | 2 cut(s) | 132, 2876 |
| PfeI | GAWTC | 5 cut(s) | 427, 518, 1706, 1786, 2342 |
| Pfl23II | CGTACG | 1 cut(s) | 219 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 61 |
| PfoI | TCCNGGA | 1 cut(s) | 2814 |
| PinAI | ACCGGT | 1 cut(s) | 2036 |
| PkrI | GCNGC | 4 cut(s) | 1144, 2322, 2454, 2742 |
| PleI | GAGTC | 7 cut(s) | 793, 818, 866, 1087, 2151, 2173, 2819 |
| PpsI | GAGTC | 7 cut(s) | 793, 818, 866, 1087, 2151, 2173, 2819 |
| PpuMI | RGGWCCY | 1 cut(s) | 1998 |
| PsiI | TTATAA | 1 cut(s) | 450 |
| Psp1406I | AACGTT | 1 cut(s) | 1297 |
| Psp5II | RGGWCCY | 1 cut(s) | 1998 |
| PspLI | CGTACG | 1 cut(s) | 219 |
| PspN4I | GGNNCC | 7 cut(s) | 43, 894, 922, 1650, 1999, 2291, 2463 |
| PspPI | GGNCC | 5 cut(s) | 1649, 1998, 2290, 2462, 2838 |
| PspPPI | RGGWCCY | 1 cut(s) | 1998 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 714, 746 |
| PsuI | RGATCY | 1 cut(s) | 2394 |
| PvuII | CAGCTG | 1 cut(s) | 2368 |
| RsaI | GTAC | 4 cut(s) | 221, 303, 732, 2737 |
| RsaNI | GTAC | 4 cut(s) | 220, 302, 731, 2736 |
| RseI | CAYNNNNRTG | 5 cut(s) | 389, 918, 1986, 2067, 2867 |
| SaqAI | TTAA | 9 cut(s) | 768, 831, 1437, 1497, 1544, 1575, 1631, 1976, 2033 |
| SatI | GCNGC | 4 cut(s) | 1143, 2321, 2453, 2741 |
| Sau3AI | GATC | 2 cut(s) | 1330, 2394 |
| Sau96I | GGNCC | 5 cut(s) | 1649, 1998, 2290, 2462, 2838 |
| SchI | GAGTC | 7 cut(s) | 794, 818, 866, 1088, 2152, 2174, 2820 |
| ScrFI | CCNGG | 2 cut(s) | 1605, 2816 |
| SduI | GDGCHC | 2 cut(s) | 254, 897 |
| SfaNI | GCATC | 3 cut(s) | 142, 1990, 2167 |
| SfcI | CTRYAG | 1 cut(s) | 2768 |
| SinI | GGWCC | 3 cut(s) | 1649, 1998, 2462 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 389, 918, 1986, 2067, 2867 |
| SmlI | CTYRAG | 1 cut(s) | 2423 |
| SmoI | CTYRAG | 1 cut(s) | 2423 |
| SpeI | ACTAGT | 1 cut(s) | 986 |
| SsiI | CCGC | 3 cut(s) | 149, 1286, 1453 |
| SspI | AATATT | 3 cut(s) | 1495, 1541, 2680 |
| SspMI | CTAG | 8 cut(s) | 557, 659, 857, 969, 987, 1719, 2051, 2237 |
| StyD4I | CCNGG | 2 cut(s) | 1603, 2814 |
| StyI | CCWWGG | 1 cut(s) | 1548 |
| TaaI | ACNGT | 9 cut(s) | 287, 742, 1170, 1183, 1257, 1676, 1853, 1877, 2789 |
| TaiI | ACGT | 5 cut(s) | 75, 186, 1300, 2102, 2856 |
| TaqI | TCGA | 7 cut(s) | 126, 276, 459, 513, 1709, 1784, 1789 |
| TaqII | GACCGA | 1 cut(s) | 1023 |
| TatI | WGTACW | 1 cut(s) | 730 |
| TfiI | GAWTC | 5 cut(s) | 427, 518, 1706, 1786, 2342 |
| Tru1I | TTAA | 9 cut(s) | 768, 831, 1437, 1497, 1544, 1575, 1631, 1976, 2033 |
| Tru9I | TTAA | 9 cut(s) | 768, 831, 1437, 1497, 1544, 1575, 1631, 1976, 2033 |
| TscAI | CASTG | 3 cut(s) | 259, 1188, 1930 |
| TseFI | GTSAC | 4 cut(s) | 358, 380, 989, 1371 |
| TseI | GCWGC | 4 cut(s) | 1142, 2320, 2452, 2740 |
| Tsp45I | GTSAC | 4 cut(s) | 358, 380, 989, 1371 |
| TspGWI | ACGGA | 1 cut(s) | 2370 |
| TspRI | CASTG | 3 cut(s) | 259, 1188, 1930 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 61 |
| VpaK11BI | GGWCC | 3 cut(s) | 1649, 1998, 2462 |
| XapI | RAATTY | 7 cut(s) | 473, 936, 1223, 1768, 1937, 2711, 2876 |
| XbaI | TCTAGA | 1 cut(s) | 856 |
| XceI | RCATGY | 1 cut(s) | 2202 |
| XmiI | GTMKAC | 2 cut(s) | 1162, 2784 |
| XmnI | GAANNNNTTC | 2 cut(s) | 132, 2876 |
| XspI | CTAG | 8 cut(s) | 557, 659, 857, 969, 987, 1719, 2051, 2237 |