Rorug04G0054500

Cinnamoyl-CoA reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0001892
Physical Location & Seq
Forward (+)
8571525 .. 8575856
4332 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0054500.1

Sequence Viewer

Length: 3012 bp
ATGGTATCTTACGTCTTTTTCTTGTATGTAGTACTATTGCTGTGCGCTTATGACAACCTATTTTGTTCTGCTAGAGATACACTAACATCTGACGATCCAGCTATCGATGATGGATCAGAAGCTCTTGTTTCAGCAGGAGGTGAGTTTGAACTGGGTTTCTTCTCTACTACTACGGGGAAAAGATATGTGGGCATATGGTATCATAAGGTGAAACCAAGAACAGTTGTATGGGTTGCCAACAGAGCTGAACCTCTACCTGCAGACTCCACTGGAGTTCTTACAATTGAAGAAGGGAATCTCCGCGTGTTTGATTATGTTACTCGGAAGCGTTATTGGTCAACAGAGATTGGAAAATTTTCACCTTTTAACAAGACAGTGAAGATAATGGATTCAGGGAACCTGGTGTTAAGGGATACTGGTGAGTTGACAGCGGATCCTTTGTGGCAGAGCTTTCAAAATCCAACTGATACATTCATTCCTGGGATGCGAATGGATAGTAACTTGAAGTTGACTTCATGGAGCGACGAAGATGACCGAAGAACTGGGAACTACACCTTCGAACTAGATCAAGAAGGGAAGTCAGAGAACCAGTTTACCATCTTAAATAATTCGTTTCATTACTGGAAAAGTGGAGAGCCAGGTAAATATTTAAGCTCAGATGAGATGCGTCCTGAGGTAGCTTTCTTGTTATCAAATTTCAGCAAGAATTCTTCTCTTTATACAACTCAGCCGCAATTTGATTACAATTATACAAGATTGGTGATGAATTCTATTGGAGTGCTCAATGGTTTGACCTGGAATGACACCATTAAGCAGTGGGTTGTGTTTTTCTCTGCGCCAAAAGATCAATGCAGTGTGATTAATGCTTGTGGAAACTTTGGCAGCTGCAACGTTAATAATACCCCGCTGGTGTGCAAATGTTTGCCAGGTTTCAACCCCCAGTTTTTAGAGAAATGGAAAAATGGAGATTTTTCAGATGGATGCAAAAGACAGTCGTCCATATGTGGCATGAAAGATACCTTCTTAAGCATAAAGGTGAACAAAGTGGGAATCTGGGATTCATCGACCAATGTTACCAGTGATACAGAATGCGAGAATGCGTGCCTTGGTAATTGCAAGTGCCAGGCTTACTCATCTGATTCATCTGTAAAGGCCACTGCTCGAAGGGATGATCTGAATATCACTGCTTGTTATCAATGGTCCACGGATCTAAATGATCTTGTAGAGGAGTCTGGTGACAATGGCAAGAATCTCAATGCTCGAGTTCCCGTGCCTGATTTAGAATCAACTACAAGAGACTGTAGCCCTTGTGGCACAACTACAATTCCTTATCCTCTGAGCACTGGAACAGATTGTGGCGACCCCATGTACTTAAGTTTCAAGTGCAATGCCTCCATTAATGAATTTAGCTTCCTTGGACCAGATGGCAAATCCTTTAGAGTTATAAATATCAGCCGAAATACACAACGATTCATTATCAAATCCAAAAATATGAATTATTGTGATTCTAGAAACAGAGTGCTGAACATTTCCTTCCCGTTTAAGGTAATCAGTTGGTGTAGTTCTGACCAGATGAAGAAATTTATTTCCGGCATAGATTCATCCAGCAGTCCTTCAGTAATAGAGATGGGTTGGGAGCCACCATCGGAAGCAAACTGCACTATCTTAGACTGCAGGGATTGGCCGTATTCAACTTGCAAAACAGTAAGAGGGGGAGAGAAAAAATGCCTTTGCAATACAAATTTTCAATGGAACGGCAGTGACTTAAATTGTACTCAAGAAGGAAATCTACAAGAGCTATCAAATAAGAGTTCAACGAAAAAATTGTTATTGTCTCTGGTTGTCGTGGCAGTCATAAGTGGGATTTTTCTGGCATGCATCATTGGTTTTTGGATATGGAGAAGAAAGATTACAAACAGACGAGATCAAGTAAGTCGTCCGCAGCTCGATAGTGAAAGACGAGTCAAAGAACTCATAGACACGAGTGACTTTAATGAAGAAGATGACAAAGGCATAGATGTACCTTTTTTTGATTTGCAAAGCATACTAGACGCTACAGATAATTTCTCAATTGGAAACAAGCTTGGACAAGGGGGGTATGGGCCTGTTTACAAGGGGATCTTTCCTGGAGGTCAAGAAATTGCTGTAAAGAGGCTATCAAGAGTTTCGGGACAAGGCTTACAGGAGTTTAAGAATGAGGTGGTGCTAATCGCCAAACTTCAACATCGTAATCTTGTAAGACTCAGAGGATATTGCATGAAAGGAGAAGAAAAGATTTTACTCTATGAGTACATGCCTAACAAAAGCTTAGATTCCTTCATATTTGATCATACACAAAGCATGTTTCTCAATTGGGAGATGCGGTTTAACATCATTTTGGGAATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCCAGGTTGAGGATCATTCATAGAGATTTGAAAACCAGCAATGTTCTTTTGGATGAGGAGATGAACCCCAAAATATCTGACTTCGGCTTGGCCAGGATTGTTGGAGGCAAAGAAACCGAGGCAAACACAAATACAGTAGTAGGAACCTATGGTTACATGTCGCCGGAATATGCATTGGATGGAAATTTCTCTGTCAAATCAGATGTCTTTAGTTTCGGTGTGGTTCTTCTAGAGATAATCAGCGGAAAAAAGAATGCAGGATTTTACCAGTCCAAACAAACTTTCAGTCTCCTTAGTTATACATGGGGACTCTGGACAGAAAACAAGGTGTTGGATTTAATGGACAACAATTTGGAAGAAAGTTGCAACAGAAGTGAATTTATAAAGTGTGTAAATGTTGGGCTCTTATGCGTACAAGAAGATCCAGTTGATCGCCCTACAATGTCAAATGTTGTTACCTTGCTTGACAGTGAAACTGCAATCCCACCAACTCCTAAACAACCAGCGTTTTTTATACGGAGAGGCAACTCTAGCACAGCTTCCTCTTCTACTAAACCAGAAACATACTCTGAAATAACTACTCTGGAAGGTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
3Beta_HSD Epimerase NAD_binding_10

Protein Analysis

1003

Amino Acids

112.82

Weight (kDa)

5.4

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 169 2.3e-23 D-mannose binding lectin
S_locus_glycop PF00954 214 - 314 4.7e-21 S-locus glycoprotein domain
PAN_2 PF08276 335 - 406 5.5e-07 PAN-like domain
Pkinase PF00069 690 - 957 1.3e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 691 - 959 1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1445, 2798
Acc36I ACCTGC 1 cut(s) 265
AccII CGCG 1 cut(s) 303
AciI CCGC 7 cut(s) 301, 431, 731, 905, 1940, 2362, 2658
AclI AACGTT 1 cut(s) 891
AclWI GGATC 8 cut(s) 89, 121, 428, 441, 1215, 2126, 2435, 2831
AcoI YGGCCR 2 cut(s) 1682, 2505
AcsI RAATTY 9 cut(s) 353, 694, 706, 766, 1403, 1580, 1741, 2599, 2792
AcuI CTGAAG 1 cut(s) 1599
AfaI GTAC 6 cut(s) 33, 1370, 1774, 2022, 2291, 2829
AfiI CCNNNNNNNGG 2 cut(s) 1543, 2424
AflII CTTAAG 2 cut(s) 1024, 1372
AflIII ACRYGT 1 cut(s) 2571
AjnI CCWGG 9 cut(s) 399, 478, 637, 794, 925, 1122, 2125, 2417, 2507
AjuI GAANNNNNNNTTGG 2 cut(s) 2681, 2713
Alw21I GWGCWC 2 cut(s) 783, 1343
Alw26I GTCTC 3 cut(s) 1290, 1839, 2708
AlwI GGATC 8 cut(s) 89, 121, 428, 441, 1215, 2126, 2435, 2831
Ama87I CYCGRG 2 cut(s) 1260, 2388
AoxI GGCC 4 cut(s) 1152, 1682, 2102, 2505
ApeKI GCWGC 3 cut(s) 882, 885, 1942
ApoI RAATTY 9 cut(s) 353, 694, 706, 766, 1403, 1580, 1741, 2599, 2792
ArsI GACNNNNNNTTYG 4 cut(s) 2604, 2636, 2686, 2718
AseI ATTAAT 2 cut(s) 861, 1398
Asp700I GAANNNNTTC 1 cut(s) 355
AspLEI GCGC 2 cut(s) 47, 838
AspS9I GGNCC 3 cut(s) 1200, 1418, 2102
AsuHPI GGTGA 7 cut(s) 152, 220, 351, 431, 772, 1048, 1247
AsuII TTCGAA 1 cut(s) 558
AvaI CYCGRG 2 cut(s) 1260, 2388
AvaII GGWCC 2 cut(s) 1200, 1418
AxyI CCTNAGG 1 cut(s) 672
BalI TGGCCA 1 cut(s) 2507
BamHI GGATCC 1 cut(s) 433
BanII GRGCYC 1 cut(s) 2820
BarI GAAGNNNNNNTAC 4 cut(s) 1773, 1805, 1894, 1926
BauI CACGAG 1 cut(s) 1981
Bbv12I GWGCWC 2 cut(s) 783, 1343
BbvI GCAGC 3 cut(s) 872, 894, 1954
BccI CCATC 7 cut(s) 104, 605, 971, 1418, 1621, 1651, 2588
BceAI ACGGC 2 cut(s) 1669, 1771
BciT130I CCWGG 9 cut(s) 401, 480, 639, 796, 927, 1124, 2127, 2419, 2509
BciVI GTATCC 1 cut(s) 406
BclI TGATCA 1 cut(s) 2326
BcoDI GTCTC 3 cut(s) 1290, 1839, 2708
BfaI CTAG 6 cut(s) 72, 563, 1509, 2048, 2645, 2946
BfmI CTRYAG 4 cut(s) 258, 1300, 1672, 2055
BfrI CTTAAG 2 cut(s) 1024, 1372
BfuAI ACCTGC 1 cut(s) 265
BfuI GTATCC 1 cut(s) 406
BglI GCCNNNNNGGC 1 cut(s) 1311
BisI GCNGC 4 cut(s) 731, 883, 886, 1943
BlsI GCNGC 4 cut(s) 732, 884, 887, 1944
BmcAI AGTACT 1 cut(s) 33
Bme1390I CCNGG 9 cut(s) 401, 480, 639, 796, 927, 1124, 2127, 2419, 2509
Bme18I GGWCC 2 cut(s) 1200, 1418
BmeT110I CYCGRG 2 cut(s) 1260, 2388
BmgT120I GGNCC 3 cut(s) 1200, 1418, 2102
BmiI GGNNCC 4 cut(s) 398, 435, 1638, 2560
BmrFI CCNGG 9 cut(s) 401, 480, 639, 796, 927, 1124, 2127, 2419, 2509
BmrI ACTGGG 3 cut(s) 161, 552, 934
BmsI GCATC 5 cut(s) 474, 654, 971, 1887, 2349
BmuI ACTGGG 3 cut(s) 161, 552, 934
BoxI GACNNNNGTC 1 cut(s) 994
BpmI CTGGAG 2 cut(s) 291, 2148
Bpu14I TTCGAA 1 cut(s) 558
BpuEI CTTGAG 1 cut(s) 1761
Bsa29I ATCGAT 1 cut(s) 105
BsaJI CCNNGG 5 cut(s) 479, 1105, 1203, 1414, 2532
BsaXI ACNNNNNCTCC 2 cut(s) 2348, 2378
Bsc4I CCNNNNNNNGG 2 cut(s) 1543, 2424
Bse21I CCTNAGG 1 cut(s) 672
Bse3DI GCAATG 2 cut(s) 1393, 2461
BseBI CCWGG 9 cut(s) 401, 480, 639, 796, 927, 1124, 2127, 2419, 2509
BseCI ATCGAT 1 cut(s) 105
BseDI CCNNGG 5 cut(s) 479, 1105, 1203, 1414, 2532
BseGI GGATG 6 cut(s) 489, 986, 1174, 1601, 2473, 2599
BseLI CCNNNNNNNGG 2 cut(s) 1543, 2424
BseMI GCAATG 2 cut(s) 1393, 2461
BseMII CTCAG 5 cut(s) 663, 669, 740, 1328, 2257
BseRI GAGGAG 2 cut(s) 1241, 2486
BseXI GCAGC 3 cut(s) 872, 894, 1954
BsgI GTGCAG 1 cut(s) 1642
Bsh1236I CGCG 1 cut(s) 303
BshFI GGCC 4 cut(s) 1154, 1684, 2104, 2507
BshVI ATCGAT 1 cut(s) 105
BsiHKAI GWGCWC 2 cut(s) 783, 1343
BsiHKCI CYCGRG 2 cut(s) 1260, 2388
BsiSI CCGG 2 cut(s) 1590, 2579
BslFI GGGAC 2 cut(s) 2184, 2736
BslI CCNNNNNNNGG 2 cut(s) 1543, 2424
BsmAI GTCTC 3 cut(s) 1290, 1839, 2708
BsmFI GGGAC 2 cut(s) 2184, 2736
BsmI GAATGC 3 cut(s) 1094, 1102, 2674
BsnI GGCC 4 cut(s) 1154, 1684, 2104, 2507
BsoBI CYCGRG 2 cut(s) 1260, 2388
Bsp119I TTCGAA 1 cut(s) 558
Bsp1286I GDGCHC 3 cut(s) 783, 1343, 2820
BspACI CCGC 7 cut(s) 301, 431, 731, 905, 1940, 2362, 2658
BspANI GGCC 4 cut(s) 1154, 1684, 2104, 2507
BspCNI CTCAG 5 cut(s) 664, 668, 739, 1329, 2256
BspDI ATCGAT 1 cut(s) 105
BspFNI CGCG 1 cut(s) 303
BspLI GGNNCC 4 cut(s) 398, 435, 1638, 2560
BspMAI CTGCAG 2 cut(s) 262, 1676
BspMI ACCTGC 1 cut(s) 265
BspPI GGATC 8 cut(s) 89, 121, 428, 441, 1215, 2126, 2435, 2831
BspT104I TTCGAA 1 cut(s) 558
BspTI CTTAAG 2 cut(s) 1024, 1372
BsrDI GCAATG 2 cut(s) 1393, 2461
BssECI CCNNGG 5 cut(s) 479, 1105, 1203, 1414, 2532
BssSI CACGAG 1 cut(s) 1981
BssT1I CCWWGG 2 cut(s) 1105, 1414
Bst2BI CACGAG 1 cut(s) 1981
Bst2UI CCWGG 9 cut(s) 401, 480, 639, 796, 927, 1124, 2127, 2419, 2509
Bst4CI ACNGT 7 cut(s) 223, 376, 993, 1301, 1705, 2551, 2885
Bst6I CTCTTC 1 cut(s) 2965
BstAFI CTTAAG 2 cut(s) 1024, 1372
BstBI TTCGAA 1 cut(s) 558
BstC8I GCNNGC 2 cut(s) 1102, 1876
BstDEI CTNAG 8 cut(s) 655, 672, 726, 1337, 1666, 2243, 2308, 2708
BstDSI CCRYGG 1 cut(s) 1203
BstF5I GGATG 6 cut(s) 489, 986, 1174, 1601, 2473, 2599
BstFNI CGCG 1 cut(s) 303
BstHHI GCGC 2 cut(s) 47, 838
BstMAI GTCTC 3 cut(s) 1290, 1839, 2708
BstMWI GCNNNNNNNGC 3 cut(s) 242, 1311, 2946
BstNI CCWGG 9 cut(s) 401, 480, 639, 796, 927, 1124, 2127, 2419, 2509
BstNSI RCATGY 4 cut(s) 1878, 2296, 2344, 2575
BstPAI GACNNNNGTC 1 cut(s) 994
BstSCI CCNGG 9 cut(s) 399, 478, 637, 794, 925, 1122, 2125, 2417, 2507
BstSFI CTRYAG 4 cut(s) 258, 1300, 1672, 2055
BstUI CGCG 1 cut(s) 303
BstV1I GCAGC 3 cut(s) 872, 894, 1954
BstX2I RGATCY 4 cut(s) 433, 1207, 2118, 2836
BstYI RGATCY 4 cut(s) 433, 1207, 2118, 2836
Bsu15I ATCGAT 1 cut(s) 105
Bsu36I CCTNAGG 1 cut(s) 672
BsuI GTATCC 1 cut(s) 406
BsuRI GGCC 4 cut(s) 1154, 1684, 2104, 2507
BsuTUI ATCGAT 1 cut(s) 105
BtgI CCRYGG 1 cut(s) 1203
BtsCI GGATG 6 cut(s) 489, 986, 1174, 1601, 2473, 2599
BtsI GCAGTG 5 cut(s) 821, 859, 1155, 1182, 1765
BveI ACCTGC 1 cut(s) 265
Cac8I GCNNGC 2 cut(s) 1102, 1876
CfoI GCGC 2 cut(s) 47, 838
Cfr13I GGNCC 3 cut(s) 1200, 1418, 2102
ClaI ATCGAT 1 cut(s) 105
CseI GACGC 2 cut(s) 656, 2060
CsiI ACCWGGT 1 cut(s) 399
Csp6I GTAC 6 cut(s) 32, 1369, 1773, 2021, 2290, 2828
CviAII CATG 9 cut(s) 516, 1009, 1366, 1875, 2257, 2293, 2341, 2572, 2718
CviQI GTAC 6 cut(s) 32, 1369, 1773, 2021, 2290, 2828
DdeI CTNAG 8 cut(s) 655, 672, 726, 1337, 1666, 2243, 2308, 2708
EaeI YGGCCR 2 cut(s) 1682, 2505
Eam1104I CTCTTC 1 cut(s) 2965
EarI CTCTTC 1 cut(s) 2965
Eco130I CCWWGG 2 cut(s) 1105, 1414
Eco24I GRGCYC 1 cut(s) 2820
Eco47I GGWCC 2 cut(s) 1200, 1418
Eco57I CTGAAG 1 cut(s) 1599
Eco81I CCTNAGG 1 cut(s) 672
Eco88I CYCGRG 2 cut(s) 1260, 2388
EcoRI GAATTC 2 cut(s) 706, 766
EcoRII CCWGG 9 cut(s) 399, 478, 637, 794, 925, 1122, 2125, 2417, 2507
EcoT14I CCWWGG 2 cut(s) 1105, 1414
EcoT22I ATGCAT 2 cut(s) 1880, 2590
EcoT38I GRGCYC 1 cut(s) 2820
ErhI CCWWGG 2 cut(s) 1105, 1414
FaeI CATG 9 cut(s) 519, 1012, 1369, 1878, 2260, 2296, 2344, 2575, 2721
FalI AAGNNNNNCTT 2 cut(s) 2105, 2137
FaqI GGGAC 2 cut(s) 2184, 2736
FatI CATG 9 cut(s) 515, 1008, 1365, 1874, 2256, 2292, 2340, 2571, 2717
FauI CCCGC 1 cut(s) 912
FauNDI CATATG 2 cut(s) 194, 1001
FbaI TGATCA 1 cut(s) 2326
Fnu4HI GCNGC 4 cut(s) 731, 883, 886, 1943
FokI GGATG 6 cut(s) 496, 993, 1181, 1588, 2480, 2606
FriOI GRGCYC 1 cut(s) 2820
Fsp4HI GCNGC 4 cut(s) 731, 883, 886, 1943
FspBI CTAG 6 cut(s) 72, 563, 1509, 2048, 2645, 2946
GlaI GCGC 2 cut(s) 46, 837
GluI GCNGC 4 cut(s) 731, 883, 886, 1943
GsuI CTGGAG 2 cut(s) 291, 2148
HaeIII GGCC 4 cut(s) 1154, 1684, 2104, 2507
HapII CCGG 2 cut(s) 1590, 2579
HgaI GACGC 2 cut(s) 656, 2060
HhaI GCGC 2 cut(s) 47, 838
Hin1II CATG 9 cut(s) 519, 1012, 1369, 1878, 2260, 2296, 2344, 2575, 2721
Hin6I GCGC 2 cut(s) 45, 836
HinP1I GCGC 2 cut(s) 45, 836
HincII GTYRAC 3 cut(s) 339, 426, 510
HindII GTYRAC 3 cut(s) 339, 426, 510
HindIII AAGCTT 2 cut(s) 2081, 2305
HpaII CCGG 2 cut(s) 1590, 2579
HphI GGTGA 7 cut(s) 152, 220, 351, 431, 772, 1048, 1247
Hpy166II GTNNAC 7 cut(s) 339, 426, 510, 594, 1039, 1203, 2110
Hpy8I GTNNAC 7 cut(s) 339, 426, 510, 594, 1039, 1203, 2110
Hpy99I CGWCG 1 cut(s) 527
HpyCH4III ACNGT 7 cut(s) 223, 376, 993, 1301, 1705, 2551, 2885
HpyCH4IV ACGT 2 cut(s) 12, 891
HpyF10VI GCNNNNNNNGC 3 cut(s) 242, 1311, 2946
HpyF3I CTNAG 8 cut(s) 655, 672, 726, 1337, 1666, 2243, 2308, 2708
HpySE526I ACGT 2 cut(s) 12, 891
Hsp92II CATG 9 cut(s) 519, 1012, 1369, 1878, 2260, 2296, 2344, 2575, 2721
HspAI GCGC 2 cut(s) 45, 836
Ksp22I TGATCA 1 cut(s) 2326
LmnI GCTCC 2 cut(s) 519, 1636
Lsp1109I GCAGC 3 cut(s) 872, 894, 1954
LweI GCATC 5 cut(s) 474, 654, 971, 1887, 2349
MabI ACCWGGT 1 cut(s) 399
MaeI CTAG 6 cut(s) 72, 563, 1509, 2048, 2645, 2946
MaeII ACGT 2 cut(s) 12, 891
MaeIII GTNAC 8 cut(s) 316, 497, 1072, 1235, 1760, 1985, 2567, 2869
MfeI CAATTG 3 cut(s) 282, 2070, 2350
MflI RGATCY 4 cut(s) 433, 1207, 2118, 2836
MhlI GDGCHC 3 cut(s) 783, 1343, 2820
MlsI TGGCCA 1 cut(s) 2507
MluNI TGGCCA 1 cut(s) 2507
MlyI GAGTC 5 cut(s) 257, 1238, 1971, 2235, 2718
MmeI TCCRAC 3 cut(s) 485, 2497, 2727
Mox20I TGGCCA 1 cut(s) 2507
Mph1103I ATGCAT 2 cut(s) 1880, 2590
MroXI GAANNNNTTC 1 cut(s) 355
MscI TGGCCA 1 cut(s) 2507
MslI CAYNNNNRTG 1 cut(s) 1034
Msp20I TGGCCA 1 cut(s) 2507
MspA1I CMGCKG 4 cut(s) 431, 885, 907, 2658
MspCI CTTAAG 2 cut(s) 1024, 1372
MspI CCGG 2 cut(s) 1590, 2579
MspR9I CCNGG 9 cut(s) 401, 480, 639, 796, 927, 1124, 2127, 2419, 2509
MunI CAATTG 3 cut(s) 282, 2070, 2350
Mva1269I GAATGC 3 cut(s) 1094, 1102, 2674
MvaI CCWGG 9 cut(s) 401, 480, 639, 796, 927, 1124, 2127, 2419, 2509
MvnI CGCG 1 cut(s) 303
MwoI GCNNNNNNNGC 3 cut(s) 242, 1311, 2946
NdeI CATATG 2 cut(s) 194, 1001
NlaIII CATG 9 cut(s) 519, 1012, 1369, 1878, 2260, 2296, 2344, 2575, 2721
NlaIV GGNNCC 4 cut(s) 398, 435, 1638, 2560
NmuCI GTSAC 3 cut(s) 1235, 1760, 1985
NsiI ATGCAT 2 cut(s) 1880, 2590
NspI RCATGY 4 cut(s) 1878, 2296, 2344, 2575
NspV TTCGAA 1 cut(s) 558
PaeI GCATGC 1 cut(s) 1878
PaeR7I CTCGAG 2 cut(s) 1260, 2388
PciI ACATGT 1 cut(s) 2571
PctI GAATGC 3 cut(s) 1094, 1102, 2674
PdmI GAANNNNTTC 1 cut(s) 355
PfoI TCCNGGA 1 cut(s) 2125
PkrI GCNGC 4 cut(s) 732, 884, 887, 1944
PleI GAGTC 5 cut(s) 257, 1237, 1970, 2235, 2718
PpsI GAGTC 5 cut(s) 257, 1237, 1970, 2235, 2718
PscI ACATGT 1 cut(s) 2571
PshAI GACNNNNGTC 1 cut(s) 994
PshBI ATTAAT 2 cut(s) 861, 1398
PsiI TTATAA 2 cut(s) 1445, 2798
Psp1406I AACGTT 1 cut(s) 891
Psp6I CCWGG 9 cut(s) 399, 478, 637, 794, 925, 1122, 2125, 2417, 2507
PspGI CCWGG 9 cut(s) 399, 478, 637, 794, 925, 1122, 2125, 2417, 2507
PspN4I GGNNCC 4 cut(s) 398, 435, 1638, 2560
PspPI GGNCC 3 cut(s) 1200, 1418, 2102
PspXI VCTCGAGB 2 cut(s) 1260, 2388
PstI CTGCAG 2 cut(s) 262, 1676
PsuI RGATCY 4 cut(s) 433, 1207, 2118, 2836
PvuII CAGCTG 1 cut(s) 885
RsaI GTAC 6 cut(s) 33, 1370, 1774, 2022, 2291, 2829
RsaNI GTAC 6 cut(s) 32, 1369, 1773, 2021, 2290, 2828
RseI CAYNNNNRTG 1 cut(s) 1034
SatI GCNGC 4 cut(s) 731, 883, 886, 1943
Sau96I GGNCC 3 cut(s) 1200, 1418, 2102
ScaI AGTACT 1 cut(s) 33
SchI GAGTC 5 cut(s) 257, 1238, 1971, 2235, 2718
ScrFI CCNGG 9 cut(s) 401, 480, 639, 796, 927, 1124, 2127, 2419, 2509
SduI GDGCHC 3 cut(s) 783, 1343, 2820
SexAI ACCWGGT 1 cut(s) 399
SfaNI GCATC 5 cut(s) 474, 654, 971, 1887, 2349
SfcI CTRYAG 4 cut(s) 258, 1300, 1672, 2055
Sfr274I CTCGAG 2 cut(s) 1260, 2388
SfuI TTCGAA 1 cut(s) 558
SinI GGWCC 2 cut(s) 1200, 1418
SlaI CTCGAG 2 cut(s) 1260, 2388
SmiMI CAYNNNNRTG 1 cut(s) 1034
SmlI CTYRAG 5 cut(s) 1024, 1260, 1372, 1776, 2388
SmoI CTYRAG 5 cut(s) 1024, 1260, 1372, 1776, 2388
SphI GCATGC 1 cut(s) 1878
SsiI CCGC 7 cut(s) 301, 431, 731, 905, 1940, 2362, 2658
SspI AATATT 1 cut(s) 647
SspMI CTAG 6 cut(s) 72, 563, 1509, 2048, 2645, 2946
StyD4I CCNGG 9 cut(s) 399, 478, 637, 794, 925, 1122, 2125, 2417, 2507
StyI CCWWGG 2 cut(s) 1105, 1414
TaaI ACNGT 7 cut(s) 223, 376, 993, 1301, 1705, 2551, 2885
TaiI ACGT 2 cut(s) 15, 894
TaqI TCGA 7 cut(s) 105, 558, 1064, 1162, 1261, 1947, 2389
TaqII GACCGA 1 cut(s) 549
TatI WGTACW 4 cut(s) 31, 1368, 1772, 2289
TauI GCSGC 1 cut(s) 733
TseFI GTSAC 3 cut(s) 1235, 1760, 1985
TseI GCWGC 3 cut(s) 882, 885, 1942
Tsp45I GTSAC 3 cut(s) 1235, 1760, 1985
TspGWI ACGGA 2 cut(s) 1220, 2947
Vha464I CTTAAG 2 cut(s) 1024, 1372
VpaK11BI GGWCC 2 cut(s) 1200, 1418
VspI ATTAAT 2 cut(s) 861, 1398
XapI RAATTY 9 cut(s) 353, 694, 706, 766, 1403, 1580, 1741, 2599, 2792
XbaI TCTAGA 2 cut(s) 1508, 2644
XceI RCATGY 4 cut(s) 1878, 2296, 2344, 2575
XhoI CTCGAG 2 cut(s) 1260, 2388
XmnI GAANNNNTTC 1 cut(s) 355
XspI CTAG 6 cut(s) 72, 563, 1509, 2048, 2645, 2946
ZrmI AGTACT 1 cut(s) 33
Zsp2I ATGCAT 2 cut(s) 1880, 2590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.