Rorug06G0010300

At1g01500-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001242
Physical Location & Seq
Reverse (-)
1485754 .. 1494455
8702 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0010300.1

Sequence Viewer

Length: 2640 bp
ATGGCGGGCCTTGCAGTGATAAGAGTCGGAGGCAAAGGCTCATCTCTCTCCTCCTCCGCCGTCTACGCCGTCGCCAATGCCCTCGCTCACGTCACTATCGACTCTTCCGCCCTCGACAGACTCTCCTCCTCCGCCGTCGCCAATCTCAAGCCTTACCACCTCGTCTCTCTCCTCCCCTCCTTCCCGTCAGTCCAAGAATCCAGAGCCTCCCTCGTTGTCCTCCTCGCCAAGCTCCTCTCCCTCAACATCCGTACCGTTCTCCCGGTTCGAATCGCCGCCGCCATAAATTCCGGCTCCACTCAAGACTTGGCGCTCGAAACCCTCGATTTGACCGAAGAGGAGGCTCTTGCGTTGGAGAAGCTCAAAGATTCTTCTGCTTTGTACGGCGTCTGTGCGCTTCTGGACCACCAATCGGCGGCTCTGTCCACGGTTTCTGACGCTGTCGCGGCGCTTTCTTGCGAGGCGTTGAAGGCTGACGTGGCGGGGTTCAATTCGGTTGACGCCGGGGACGGGTACGCCGCGAAGGAGGTGATCGGAGTTGCTAGTGATTTGAAGGTTTTGTTGAACGGGTCGAAGTTAGTCGGCAAGATTGAGACTGAAGCTGTATCGGAGATTCCGAAAATTCACGCCAGTCTGAGAGTGCAAGTGAAATTGGTGCATGCTAAGACTAGGGAGGAGCTGAATTCTGGAGCCAAAGTAGGGAAAGGTGGTTCCCGGAGCGCCAGGTCGGAGAGGACCGCATTGTTGGCGTTGGCGGCGGCGCTGTTTGACTTGGGGGATTACAGTCTCCGGCGAGCGAAGTTGGATTTGGAGGCAGTGGGGAGTGAGAGTTTGTGTTTGAGATTGGTGGAGTTGTTTGGGAAGCAATGCCCTAGTGGTGAAAGCTTGAGAGGTGGGCTTAAGTTGGTTCAGGAGTTGGCTTTCGAAGAGGAAGAGAATTATGTTAAGTTTGCGCATGCAGTGAATGTGTTGATGGAGCTTGTATGGAAGATTGTGACTTGGGAGGCAATAGCAGTGTTTGTGGCGCTGGAGGGAGCAGAGTTGACTGGGAAGGGTCAAGGAGGTGAAGTGAATGGAGAAGTGAATGCGAAAACAGGGAAGAAGAGTGAGAAGAAGAAGAAGGCGGTTTTGGGGAAAGGGACAACTGTTATGGTACAGTTGATTAAAGATAAGCTGCAGGGTGAGGGAGGAAATGCTGTTGATAGTTCAGAGTTGTTGGAAAATTGGGTCAAGGAGCTTTTATTGTTTTTGGACCCGAAGAGCTCTGAGTTTGATGGTTTGTTGAACAAGGTGAAGGAGATAGTAGAAAGCAATGAAACTAGAAGACTCCCAAAGCTTCCAAAGGGTACTCGTGACTTTGCAAAAGAACAAATGACAATAAGAAAGAAAGCATTTTCGATAATAGAAGATGTTTTTGAGAGGCATGGTGCCACAGCTCTGGATACTCCAGTTTTTGAATTGAGAGACACTCTCATGGGCAAATATGGGGAAGACTCGAAATTGATTTATGATCTTGCTGACCAGGGAGGAGAGCTTTCCTCACTGCGATATGATTTAACTGTTCCATTTGCTAGGTATGTTGCTATGAATGGTATCACATCCTTTAAAAGGTACCAAATAGCAAAGGTCTACAGAAGAGACAATCCCTCTAAGGGTAGATACCGTGAGTTCTACCAATGCGACTTTGATATTGCTGGCCAAAGTGAAAAAATGGGACCAGATTTTGAGGCTGTCTATGTGCTTACAGAACTTCTTGATGAGCTGAATATTGGAGACTACGAGGTTAAGTTAAATCACCGAAAGTTGTTGGATGGAATGTTGGAAATATGTGGAGTGCCTCCTGAAAAATTCAGAACTATTTGTTCTAGTATTGACAAGTTAGACAAGCAGTCATTCGAGCAAATAAAAAAAGAAATGGTGGAGGAGAAGGGCTTAAGTGTTGAGACAGCCGACAGAATTGGTACTTTTGTGAAAGAGCGGGGACATCCTTTGGAATTGTTATCTAAGCTTAAACAGGAGGGCAGCGAGTTCTTGGAGAACAATTCATCTATAGATGCACTGAATGACCTGGAGATCTTGTTCAAATGTTTGGAAAAGTCACAGTGTATTGGAAAAGTGGTTTTTGACTTGAGTCTTGCAAGGGGTCTTGATTATTATACTGGAGTCATATATGAAGCTGTTTTCAAGGGTGGTGCGCAGATGGGTTCCATTGCTGCTGGTGGACGATATGACAACCTTATAGGGATGTTCGGTACAAAGCAAGTTCCAGCAGTTGGTGTCAGCCTTGGAATTGAGCGAGTATTTGCTATAATGGAGCAGCTTCACAAAGACCAGAATCAGACAACCCGGGCAACCAAGACTGAGGTCCTAGTGAGTATATTAGGGGATGATATAGGACTAGCAGCAGAGCTATCAGGTGAGTTGTGGAAGGGAAAAGTGCAAGCAGAATTCTTGGTCAATAAGAGAGTGACGAAGCACTTTGATCGAGCAAAGGATTCTAAGATTCCCTGGATGATAATTGTGGGTGAAAAAGAGCAGAATGAAGGGGTTGTTCGATTGAAGAACATTGCAGCTGGGGAAGAAGTCGTAATTCAGAGAAGTGATATTGTTGAAGAACTTAAGAAGCGGTTGAATGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

879

Amino Acids

95.94

Weight (kDa)

5.78

Isoelectric Point (pI)

32.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lyase_aromatic PF00221 101 - 229 9.5e-06 Aromatic amino acid lyase
tRNA-synt_His PF13393 449 - 767 1.5e-39 Histidyl-tRNA synthetase
HGTP_anticodon2 PF12745 785 - 877 1.4e-06 Anticodon binding domain of tRNAs
HGTP_anticodon PF03129 799 - 876 9.3e-13 Anticodon binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 954, 2196
Acc65I GGTACC 1 cut(s) 1611
AccB1I GGYRCC 2 cut(s) 1427, 1611
AccB7I CCANNNNNTGG 1 cut(s) 2273
AccBSI CCGCTC 1 cut(s) 1978
AccI GTMKAC 2 cut(s) 63, 1629
AccII CGCG 2 cut(s) 446, 521
AcoI YGGCCR 1 cut(s) 1696
AcsI RAATTY 5 cut(s) 286, 621, 682, 1847, 2447
AcuI CTGAAG 1 cut(s) 618
AcyI GRCGYC 2 cut(s) 387, 501
AfaI GTAC 8 cut(s) 253, 383, 515, 1155, 1348, 1613, 1963, 2254
AfiI CCNNNNNNNGG 7 cut(s) 412, 415, 510, 699, 1608, 1652, 2273
AflII CTTAAG 3 cut(s) 899, 1933, 2618
AhdI GACNNNNNGTC 1 cut(s) 1888
AjiI CACGTC 2 cut(s) 91, 478
AjnI CCWGG 4 cut(s) 722, 1521, 2067, 2507
AjuI GAANNNNNNNTTGG 4 cut(s) 791, 823, 1112, 1144
AloI GAACNNNNNNTCC 4 cut(s) 694, 726, 2063, 2095
Alw21I GWGCWC 1 cut(s) 1265
Alw26I GTCTC 7 cut(s) 169, 587, 791, 1458, 1632, 1767, 1937
Ama87I CYCGRG 1 cut(s) 2346
AoxI GGCC 2 cut(s) 7, 1696
ApeKI GCWGC 6 cut(s) 1174, 2022, 2213, 2317, 2402, 2570
ApoI RAATTY 5 cut(s) 286, 621, 682, 1847, 2447
Asp718I GGTACC 1 cut(s) 1611
AspLEI GCGC 8 cut(s) 313, 397, 451, 722, 763, 955, 1027, 2197
AspS9I GGNCC 6 cut(s) 7, 403, 735, 1252, 1715, 2365
AsuC2I CCSGG 5 cut(s) 263, 505, 715, 2347, 2348
AsuHPI GGTGA 8 cut(s) 541, 890, 1076, 1193, 1303, 1787, 2429, 2537
AsuII TTCGAA 2 cut(s) 268, 924
AvaI CYCGRG 1 cut(s) 2346
AvaII GGWCC 5 cut(s) 403, 735, 1252, 1715, 2365
BaeI ACNNNNGTAYC 6 cut(s) 235, 268, 1434, 1467, 1953, 1986
BalI TGGCCA 1 cut(s) 1698
BanI GGYRCC 2 cut(s) 1427, 1611
BanII GRGCYC 1 cut(s) 1265
BauI CACGAG 1 cut(s) 1350
BbsI GAAGAC 2 cut(s) 1330, 1497
Bbv12I GWGCWC 1 cut(s) 1265
BbvI GCAGC 6 cut(s) 1161, 2034, 2200, 2329, 2414, 2582
BccI CCATC 4 cut(s) 967, 1268, 1805, 2194
BceAI ACGGC 4 cut(s) 44, 53, 119, 400
BcgI CGANNNNNNTGC 2 cut(s) 2465, 2499
BciT130I CCWGG 4 cut(s) 724, 1523, 2069, 2509
BciVI GTATCC 1 cut(s) 1435
BcnI CCSGG 5 cut(s) 263, 505, 715, 2347, 2348
BcoDI GTCTC 7 cut(s) 169, 587, 791, 1458, 1632, 1767, 1937
BfaI CTAG 8 cut(s) 543, 669, 873, 1320, 1572, 1866, 2369, 2399
BfmI CTRYAG 3 cut(s) 1175, 1630, 2049
BfoI RGCGCY 5 cut(s) 314, 452, 723, 764, 1028
BfrI CTTAAG 3 cut(s) 899, 1933, 2618
BfuI GTATCC 1 cut(s) 1435
BglII AGATCT 1 cut(s) 2073
Bme1390I CCNGG 9 cut(s) 263, 505, 715, 724, 1523, 2069, 2347, 2348, 2509
Bme18I GGWCC 5 cut(s) 403, 735, 1252, 1715, 2365
BmeRI GACNNNNNGTC 1 cut(s) 1888
BmeT110I CYCGRG 1 cut(s) 2346
BmgBI CACGTC 2 cut(s) 91, 478
BmgT120I GGNCC 6 cut(s) 7, 403, 735, 1252, 1715, 2365
BmiI GGNNCC 8 cut(s) 295, 691, 712, 1254, 1429, 1613, 1716, 2206
BmrFI CCNGG 9 cut(s) 263, 505, 715, 724, 1523, 2069, 2347, 2348, 2509
BmrI ACTGGG 1 cut(s) 1056
BmsI GCATC 1 cut(s) 2044
BmuI ACTGGG 1 cut(s) 1056
BoxI GACNNNNGTC 2 cut(s) 2130, 2363
BpiI GAAGAC 2 cut(s) 1330, 1497
BplI GAGNNNNNCTC 8 cut(s) 195, 227, 1453, 1485, 1455, 1487, 1523, 1555
BpmI CTGGAG 5 cut(s) 708, 1049, 1431, 2090, 2181
Bpu14I TTCGAA 2 cut(s) 268, 924
BpuEI CTTGAG 4 cut(s) 131, 285, 907, 2149
BpuMI CCSGG 5 cut(s) 263, 505, 715, 2347, 2348
BsaHI GRCGYC 2 cut(s) 387, 501
BsaJI CCNNGG 6 cut(s) 426, 504, 1522, 2284, 2346, 2507
Bsc4I CCNNNNNNNGG 7 cut(s) 412, 415, 510, 699, 1608, 1652, 2273
Bse1I ACTGG 4 cut(s) 630, 1051, 1448, 2164
Bse3DI GCAATG 4 cut(s) 872, 1318, 2208, 2565
BseBI CCWGG 4 cut(s) 724, 1523, 2069, 2509
BseDI CCNNGG 6 cut(s) 426, 504, 1522, 2284, 2346, 2507
BseGI GGATG 7 cut(s) 246, 1598, 1816, 1984, 2250, 2392, 2517
BseLI CCNNNNNNNGG 7 cut(s) 412, 415, 510, 699, 1608, 1652, 2273
BseMI GCAATG 4 cut(s) 872, 1318, 2208, 2565
BseMII CTCAG 3 cut(s) 626, 1257, 2352
BseNI ACTGG 4 cut(s) 630, 1051, 1448, 2164
BseXI GCAGC 6 cut(s) 1161, 2034, 2200, 2329, 2414, 2582
BseYI CCCAGC 1 cut(s) 2573
Bsh1236I CGCG 2 cut(s) 446, 521
BshFI GGCC 2 cut(s) 9, 1698
BshNI GGYRCC 2 cut(s) 1427, 1611
BsiHKAI GWGCWC 1 cut(s) 1265
BsiHKCI CYCGRG 1 cut(s) 2346
BsiSI CCGG 6 cut(s) 263, 291, 504, 715, 790, 2347
BslFI GGGAC 4 cut(s) 521, 1153, 1728, 1995
BslI CCNNNNNNNGG 7 cut(s) 412, 415, 510, 699, 1608, 1652, 2273
BsmAI GTCTC 7 cut(s) 169, 587, 791, 1458, 1632, 1767, 1937
BsmBI CGTCTC 1 cut(s) 169
BsmFI GGGAC 4 cut(s) 521, 1153, 1728, 1995
BsmI GAATGC 2 cut(s) 1090, 2638
BsnI GGCC 2 cut(s) 9, 1698
BsoBI CYCGRG 1 cut(s) 2346
Bsp119I TTCGAA 2 cut(s) 268, 924
Bsp1286I GDGCHC 1 cut(s) 1265
Bsp143I GATC 4 cut(s) 531, 1510, 2073, 2482
BspANI GGCC 2 cut(s) 9, 1698
BspCNI CTCAG 3 cut(s) 627, 1258, 2353
BspFNI CGCG 2 cut(s) 446, 521
BspLI GGNNCC 8 cut(s) 295, 691, 712, 1254, 1429, 1613, 1716, 2206
BspMAI CTGCAG 1 cut(s) 1179
BspQI GCTCTTC 1 cut(s) 1253
BspT104I TTCGAA 2 cut(s) 268, 924
BspT107I GGYRCC 2 cut(s) 1427, 1611
BspTI CTTAAG 3 cut(s) 899, 1933, 2618
BsrBI CCGCTC 1 cut(s) 1978
BsrDI GCAATG 4 cut(s) 872, 1318, 2208, 2565
BsrI ACTGG 4 cut(s) 630, 1051, 1448, 2164
BssECI CCNNGG 6 cut(s) 426, 504, 1522, 2284, 2346, 2507
BssMI GATC 4 cut(s) 531, 1510, 2073, 2482
BssNI GRCGYC 2 cut(s) 387, 501
BssSI CACGAG 1 cut(s) 1350
BssT1I CCWWGG 1 cut(s) 2284
Bst2BI CACGAG 1 cut(s) 1350
Bst2UI CCWGG 4 cut(s) 724, 1523, 2069, 2509
Bst4CI ACNGT 8 cut(s) 256, 430, 785, 1147, 1158, 1561, 1664, 2103
Bst6I CTCTTC 7 cut(s) 109, 330, 921, 927, 1097, 1253, 1630
BstACI GRCGYC 2 cut(s) 387, 501
BstAFI CTTAAG 3 cut(s) 899, 1933, 2618
BstBI TTCGAA 2 cut(s) 268, 924
BstC8I GCNNGC 6 cut(s) 7, 660, 795, 957, 1696, 2442
BstDEI CTNAG 7 cut(s) 635, 663, 1266, 1650, 2004, 2361, 2499
BstDSI CCRYGG 1 cut(s) 426
BstENI CCTNNNNNAGG 1 cut(s) 1606
BstF5I GGATG 7 cut(s) 246, 1598, 1816, 1984, 2250, 2392, 2517
BstFNI CGCG 2 cut(s) 446, 521
BstH2I RGCGCY 5 cut(s) 314, 452, 723, 764, 1028
BstHHI GCGC 8 cut(s) 313, 397, 451, 722, 763, 955, 1027, 2197
BstKTI GATC 4 cut(s) 534, 1513, 2076, 2485
BstMAI GTCTC 7 cut(s) 169, 587, 791, 1458, 1632, 1767, 1937
BstMBI GATC 4 cut(s) 531, 1510, 2073, 2482
BstMWI GCNNNNNNNGC 7 cut(s) 11, 65, 446, 470, 479, 746, 755
BstNI CCWGG 4 cut(s) 724, 1523, 2069, 2509
BstNSI RCATGY 2 cut(s) 662, 959
BstPAI GACNNNNGTC 2 cut(s) 2130, 2363
BstSCI CCNGG 9 cut(s) 261, 503, 713, 722, 1521, 2067, 2345, 2346, 2507
BstSFI CTRYAG 3 cut(s) 1175, 1630, 2049
BstUI CGCG 2 cut(s) 446, 521
BstV1I GCAGC 6 cut(s) 1161, 2034, 2200, 2329, 2414, 2582
BstV2I GAAGAC 2 cut(s) 1330, 1497
BstX2I RGATCY 1 cut(s) 2073
BstXI CCANNNNNNTGG 1 cut(s) 1438
BstYI RGATCY 1 cut(s) 2073
BsuI GTATCC 1 cut(s) 1435
BsuRI GGCC 2 cut(s) 9, 1698
BtgI CCRYGG 1 cut(s) 426
BtrI CACGTC 2 cut(s) 91, 478
BtsCI GGATG 7 cut(s) 246, 1598, 1816, 1984, 2250, 2392, 2517
BtsI GCAGTG 5 cut(s) 21, 822, 966, 1020, 1541
BtsIMutI CAGTG 7 cut(s) 21, 822, 966, 1020, 1541, 2057, 2108
Cac8I GCNNGC 6 cut(s) 7, 660, 795, 957, 1696, 2442
CfoI GCGC 8 cut(s) 313, 397, 451, 722, 763, 955, 1027, 2197
Cfr13I GGNCC 6 cut(s) 7, 403, 735, 1252, 1715, 2365
Cfr9I CCCGGG 1 cut(s) 2346
CseI GACGC 3 cut(s) 376, 446, 509
Csp6I GTAC 8 cut(s) 252, 382, 514, 1154, 1347, 1612, 1962, 2253
CviAII CATG 5 cut(s) 659, 956, 1424, 1474, 2637
CviQI GTAC 8 cut(s) 252, 382, 514, 1154, 1347, 1612, 1962, 2253
DdeI CTNAG 7 cut(s) 635, 663, 1266, 1650, 2004, 2361, 2499
DpnI GATC 4 cut(s) 533, 1512, 2075, 2484
DpnII GATC 4 cut(s) 531, 1510, 2073, 2482
DraI TTTAAA 1 cut(s) 1606
DriI GACNNNNNGTC 1 cut(s) 1888
EaeI YGGCCR 1 cut(s) 1696
Eam1104I CTCTTC 7 cut(s) 109, 330, 921, 927, 1097, 1253, 1630
Eam1105I GACNNNNNGTC 1 cut(s) 1888
EarI CTCTTC 7 cut(s) 109, 330, 921, 927, 1097, 1253, 1630
EciI GGCGGA 3 cut(s) 46, 97, 121
Ecl136II GAGCTC 1 cut(s) 1263
Eco130I CCWWGG 1 cut(s) 2284
Eco24I GRGCYC 1 cut(s) 1265
Eco47I GGWCC 5 cut(s) 403, 735, 1252, 1715, 2365
Eco53kI GAGCTC 1 cut(s) 1263
Eco57I CTGAAG 1 cut(s) 618
Eco88I CYCGRG 1 cut(s) 2346
EcoICRI GAGCTC 1 cut(s) 1263
EcoNI CCTNNNNNAGG 1 cut(s) 1606
EcoO109I RGGNCCY 1 cut(s) 2365
EcoRI GAATTC 2 cut(s) 682, 2447
EcoRII CCWGG 4 cut(s) 722, 1521, 2067, 2507
EcoT14I CCWWGG 1 cut(s) 2284
EcoT22I ATGCAT 1 cut(s) 2638
EcoT38I GRGCYC 1 cut(s) 1265
ErhI CCWWGG 1 cut(s) 2284
Esp3I CGTCTC 1 cut(s) 169
FaeI CATG 5 cut(s) 662, 959, 1427, 1477, 2640
FaqI GGGAC 4 cut(s) 521, 1153, 1728, 1995
FatI CATG 5 cut(s) 658, 955, 1423, 1473, 2636
FauI CCCGC 2 cut(s) 475, 1971
FblI GTMKAC 2 cut(s) 63, 1629
FokI GGATG 7 cut(s) 233, 1585, 1823, 1971, 2257, 2399, 2524
FriOI GRGCYC 1 cut(s) 1265
FspBI CTAG 8 cut(s) 543, 669, 873, 1320, 1572, 1866, 2369, 2399
FspI TGCGCA 2 cut(s) 954, 2196
GlaI GCGC 8 cut(s) 312, 396, 450, 721, 762, 954, 1026, 2196
GsaI CCCAGC 1 cut(s) 2577
GsuI CTGGAG 5 cut(s) 708, 1049, 1431, 2090, 2181
HaeII RGCGCY 5 cut(s) 314, 452, 723, 764, 1028
HaeIII GGCC 2 cut(s) 9, 1698
HapII CCGG 6 cut(s) 263, 291, 504, 715, 790, 2347
HgaI GACGC 3 cut(s) 376, 446, 509
HhaI GCGC 8 cut(s) 313, 397, 451, 722, 763, 955, 1027, 2197
Hin1I GRCGYC 2 cut(s) 387, 501
Hin1II CATG 5 cut(s) 662, 959, 1427, 1477, 2640
Hin6I GCGC 8 cut(s) 311, 395, 449, 720, 761, 953, 1025, 2195
HinP1I GCGC 8 cut(s) 311, 395, 449, 720, 761, 953, 1025, 2195
HincII GTYRAC 2 cut(s) 499, 1044
HindII GTYRAC 2 cut(s) 499, 1044
HindIII AAGCTT 3 cut(s) 883, 1334, 2006
HpaII CCGG 6 cut(s) 263, 291, 504, 715, 790, 2347
HphI GGTGA 8 cut(s) 541, 890, 1076, 1193, 1303, 1787, 2429, 2537
Hpy166II GTNNAC 6 cut(s) 64, 426, 499, 1044, 1630, 2222
Hpy8I GTNNAC 6 cut(s) 64, 426, 499, 1044, 1630, 2222
Hpy99I CGWCG 2 cut(s) 74, 140
HpyCH4III ACNGT 8 cut(s) 256, 430, 785, 1147, 1158, 1561, 1664, 2103
HpyCH4IV ACGT 2 cut(s) 90, 477
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 65, 446, 470, 479, 746, 755
HpyF3I CTNAG 7 cut(s) 635, 663, 1266, 1650, 2004, 2361, 2499
HpySE526I ACGT 2 cut(s) 90, 477
Hsp92I GRCGYC 2 cut(s) 387, 501
Hsp92II CATG 5 cut(s) 662, 959, 1427, 1477, 2640
HspAI GCGC 8 cut(s) 311, 395, 449, 720, 761, 953, 1025, 2195
KpnI GGTACC 1 cut(s) 1615
Kzo9I GATC 4 cut(s) 531, 1510, 2073, 2482
LguI GCTCTTC 1 cut(s) 1253
LmnI GCTCC 9 cut(s) 237, 299, 676, 689, 717, 976, 1034, 1234, 2314
Lsp1109I GCAGC 6 cut(s) 1161, 2034, 2200, 2329, 2414, 2582
LweI GCATC 1 cut(s) 2044
MaeI CTAG 8 cut(s) 543, 669, 873, 1320, 1572, 1866, 2369, 2399
MaeII ACGT 2 cut(s) 90, 477
MaeIII GTNAC 5 cut(s) 91, 994, 1352, 2097, 2467
MalI GATC 4 cut(s) 533, 1512, 2075, 2484
MbiI CCGCTC 1 cut(s) 1978
MboI GATC 4 cut(s) 531, 1510, 2073, 2482
MflI RGATCY 1 cut(s) 2073
MhlI GDGCHC 1 cut(s) 1265
MlsI TGGCCA 1 cut(s) 1698
MluNI TGGCCA 1 cut(s) 1698
MlyI GAGTC 7 cut(s) 33, 95, 114, 1320, 1487, 2140, 2172
MmeI TCCRAC 7 cut(s) 7, 333, 708, 783, 1197, 1788, 1800
Mox20I TGGCCA 1 cut(s) 1698
Mph1103I ATGCAT 1 cut(s) 2638
MscI TGGCCA 1 cut(s) 1698
MslI CAYNNNNRTG 1 cut(s) 1472
Msp20I TGGCCA 1 cut(s) 1698
MspA1I CMGCKG 1 cut(s) 2573
MspCI CTTAAG 3 cut(s) 899, 1933, 2618
MspI CCGG 6 cut(s) 263, 291, 504, 715, 790, 2347
MspR9I CCNGG 9 cut(s) 263, 505, 715, 724, 1523, 2069, 2347, 2348, 2509
Mva1269I GAATGC 2 cut(s) 1090, 2638
MvaI CCWGG 4 cut(s) 724, 1523, 2069, 2509
MvnI CGCG 2 cut(s) 446, 521
MwoI GCNNNNNNNGC 7 cut(s) 11, 65, 446, 470, 479, 746, 755
NciI CCSGG 5 cut(s) 263, 505, 715, 2347, 2348
NdeII GATC 4 cut(s) 531, 1510, 2073, 2482
NlaIII CATG 5 cut(s) 662, 959, 1427, 1477, 2640
NlaIV GGNNCC 8 cut(s) 295, 691, 712, 1254, 1429, 1613, 1716, 2206
NmuCI GTSAC 5 cut(s) 91, 994, 1352, 2097, 2467
NsbI TGCGCA 2 cut(s) 954, 2196
NsiI ATGCAT 1 cut(s) 2638
NspI RCATGY 2 cut(s) 662, 959
NspV TTCGAA 2 cut(s) 268, 924
PaeI GCATGC 2 cut(s) 662, 959
PciSI GCTCTTC 1 cut(s) 1253
PcsI WCGNNNNNNNCGW 4 cut(s) 96, 321, 330, 614
PctI GAATGC 2 cut(s) 1090, 2638
PfeI GAWTC 7 cut(s) 197, 270, 368, 613, 2335, 2495, 2503
PflFI GACNNNGTC 1 cut(s) 440
PflMI CCANNNNNTGG 1 cut(s) 2273
PfoI TCCNGGA 1 cut(s) 713
PleI GAGTC 7 cut(s) 32, 95, 114, 1320, 1487, 2139, 2171
PpsI GAGTC 7 cut(s) 32, 95, 114, 1320, 1487, 2139, 2171
PpuMI RGGWCCY 1 cut(s) 2365
PshAI GACNNNNGTC 2 cut(s) 2130, 2363
Psp124BI GAGCTC 1 cut(s) 1265
Psp5II RGGWCCY 1 cut(s) 2365
Psp6I CCWGG 4 cut(s) 722, 1521, 2067, 2507
PspFI CCCAGC 1 cut(s) 2573
PspGI CCWGG 4 cut(s) 722, 1521, 2067, 2507
PspN4I GGNNCC 8 cut(s) 295, 691, 712, 1254, 1429, 1613, 1716, 2206
PspPI GGNCC 6 cut(s) 7, 403, 735, 1252, 1715, 2365
PspPPI RGGWCCY 1 cut(s) 2365
PstI CTGCAG 1 cut(s) 1179
PsuI RGATCY 1 cut(s) 2073
PsyI GACNNNGTC 1 cut(s) 440
PvuII CAGCTG 1 cut(s) 2573
RsaI GTAC 8 cut(s) 253, 383, 515, 1155, 1348, 1613, 1963, 2254
RsaNI GTAC 8 cut(s) 252, 382, 514, 1154, 1347, 1612, 1962, 2253
RseI CAYNNNNRTG 1 cut(s) 1472
SacI GAGCTC 1 cut(s) 1265
SapI GCTCTTC 1 cut(s) 1253
Sau3AI GATC 4 cut(s) 531, 1510, 2073, 2482
Sau96I GGNCC 6 cut(s) 7, 403, 735, 1252, 1715, 2365
SchI GAGTC 7 cut(s) 33, 95, 114, 1320, 1487, 2140, 2172
ScrFI CCNGG 9 cut(s) 263, 505, 715, 724, 1523, 2069, 2347, 2348, 2509
SduI GDGCHC 1 cut(s) 1265
SfaNI GCATC 1 cut(s) 2044
SfcI CTRYAG 3 cut(s) 1175, 1630, 2049
SfuI TTCGAA 2 cut(s) 268, 924
SinI GGWCC 5 cut(s) 403, 735, 1252, 1715, 2365
SmaI CCCGGG 1 cut(s) 2348
SmiMI CAYNNNNRTG 1 cut(s) 1472
SmlI CTYRAG 7 cut(s) 146, 300, 886, 899, 1933, 2128, 2618
SmoI CTYRAG 7 cut(s) 146, 300, 886, 899, 1933, 2128, 2618
SphI GCATGC 2 cut(s) 662, 959
SspI AATATT 1 cut(s) 1768
SspMI CTAG 8 cut(s) 543, 669, 873, 1320, 1572, 1866, 2369, 2399
SstI GAGCTC 1 cut(s) 1265
StyD4I CCNGG 9 cut(s) 261, 503, 713, 722, 1521, 2067, 2345, 2346, 2507
StyI CCWWGG 1 cut(s) 2284
TaaI ACNGT 8 cut(s) 256, 430, 785, 1147, 1158, 1561, 1664, 2103
TaiI ACGT 2 cut(s) 93, 480
TaqII GACCGA 1 cut(s) 347
TauI GCSGC 7 cut(s) 278, 281, 419, 449, 521, 758, 761
TfiI GAWTC 7 cut(s) 197, 270, 368, 613, 2335, 2495, 2503
TscAI CASTG 7 cut(s) 21, 822, 966, 1020, 1548, 2064, 2108
TseFI GTSAC 5 cut(s) 91, 994, 1352, 2097, 2467
TseI GCWGC 6 cut(s) 1174, 2022, 2213, 2317, 2402, 2570
Tsp45I GTSAC 5 cut(s) 91, 994, 1352, 2097, 2467
TspDTI ATGAA 5 cut(s) 1329, 1601, 2034, 2187, 2556
TspGWI ACGGA 1 cut(s) 239
TspMI CCCGGG 1 cut(s) 2346
TspRI CASTG 7 cut(s) 21, 822, 966, 1020, 1548, 2064, 2108
Tth111I GACNNNGTC 1 cut(s) 440
Van91I CCANNNNNTGG 1 cut(s) 2273
Vha464I CTTAAG 3 cut(s) 899, 1933, 2618
VpaK11BI GGWCC 5 cut(s) 403, 735, 1252, 1715, 2365
XagI CCTNNNNNAGG 1 cut(s) 1606
XapI RAATTY 5 cut(s) 286, 621, 682, 1847, 2447
XceI RCATGY 2 cut(s) 662, 959
XcmI CCANNNNNNNNNTGG 1 cut(s) 304
XmaI CCCGGG 1 cut(s) 2346
XmiI GTMKAC 2 cut(s) 63, 1629
XspI CTAG 8 cut(s) 543, 669, 873, 1320, 1572, 1866, 2369, 2399
Zsp2I ATGCAT 1 cut(s) 2638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.