Rorug06G0010600

At1g01500-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001242
Physical Location & Seq
Forward (+)
1516155 .. 1525544
9390 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0010600.1

Sequence Viewer

Length: 2745 bp
ATGGCGTCGCTCTCGTCGTCGGCGATATCTAACCACCGCCTCTCCCCCAATGCCTTTGTGCCTAAGAAGATCTGCTTCTTCTCTAATCAATGCCGCGCATTACTTCTCCCTCAGCGCTCTCCTATTTGCAGGATGGGCTTTGTCTCTGGGCTGGAAAGGAAAAAGACTTCTAAAACCAACATCTTTGCATCAGTCACAGACTCTTCAGTAGGAACATCCCCTGAGAAAGTCCAGCTTCCAAAAGGTGACAGTTGGTCTGTTCATAAATTTGGGGGCACTTGCGTGGGAAGTTCGGAAAGAATTAATAATGTTGCAAAGATAATTCTTAGTGATGAGTCGGAGAGGAAGTTTGTAGTTGTCTCTGCAATGTCTAAGGTAACAGATATGATGTACGATCTCATCTTAAAGGCTCAATCACGAGACGAAACCTATTTGGCTGCATTAGATGCTGTTTTAGTAAAACACAGATCAACAGCTGTCGATTTACTTGATGGGAATGAACTTGGTAGCTTCTTATCAGCATTAAATCAGGACATCAGTAACCTGAAAGCTATGCTTCGTGCAATATATATTGCTGGTCATGCAACAGAATCTTTCACAGATTTTGTGGTAGGACATGGAGAGTTATGGTCTGCTCAGTTACTGGCATCTGTTGTTAGAAAGAATGGAGTGGATTGCAAGTGGATGGATACAAGGGAAGTCCTTATTGTTAACCTTACTAGCTCTGATCAAGTTGATCCTGATTTCGAGAAATCTGAAAAGAAACTTGAGAAATGGTACTCAAGAAATCCATCAAAAACAATCATAGCTACTGGTTTTATTGCTAGTACACCCCAAGACATTCCTACTACTTTGAAGAGAGATGGAAGTGACTTCTCTGCAGCTATCATGGGTGCTCTATTCAAGGCTGGTCAAGTTACAATTTGGACAGATGTTGATGGTGTCTATAGTGCGGACCCCAGGAAAGTTAGTGAAGCAGTGATTCTGAAGACATTGTCTTATCAAGAGGCCTGGGAAATGTCTTATTTTGGGGCAAATGTTCTGCATCCACGTACCATCATTCCAGTAATGCGATATGACATCCCAATTATCATAAGGAACGTTTTCAACCTCTCTGCACCTGGAACAAAAATTTGCCGCTCTTCTACTACTGAGGATGAAGTGGACCAGAGTTTGGAATCCTTCGTCAGAGGGTTTGCGACAATAGACAACTTGGCCCTTGTAAATGTTGAAGGAACTGGAATGGCTGGTGTTCCTGGTACAGCTAGTGCTATATTTTCTGCCGTTAAAGATGTGGGGGCTAATGTTATTATGATATCTCAGGCTAGTAGCGAACATTCTGTATGCTTTGCTGTCCCGGAGAAGGAAGTAAAAGCTGTTTCTAAGGCACTGCAATCTAGGTTCCGTGAAGCTTTGAATGCTGGGCGTCTTTCTCAGGTTCAAGTCATTCCGAACTGTAGTATATTGGCAGCGGTTGGCCAGAAAATGGCAAGTACTCCTGGAGTTAGTGCAACTCTTTTCAACGCCCTGGCAAAGGCAAATATTAACGTGCGTGCTATAGCTCAAGGTTGTTCTGAGTACAACATTACAGTAGTATTAAAGCGGGAGGATTGTATTAGGGCCCTGAGAGCGGTTCACTCTAGATTTTATCTTTCGAGAACCACTATAGCAATGGGCATTGTTGGACCAGGACTTATTGGTGCTACATTACTTGATCAACTGAGAGATCAGGCTGCAACTCTTAAGGAAGAGTTTAACATTGACTTGCGTGTAATGGGAATTACTGGCTCAAGGACAATGCTTTTGAGTGAGACGGGTGTTGACTTATCTAGATGGAGAGAACTTCAACAAGAAAAAGGAGAACGGGCAGATATGGAAAAATTTGTGCAGCATGTACATGGGAATCATTTTATTCCGAATACTGTTCTAGTTGACTGCACAGCTGACTCTGTCATTGCAAGCCATTACTATGGCTGGTTGCGGAAAGGAATACATGTAGTCACCCCCAACAAAAAGGCGAATTCAGGGCCTCTTGATCAGTATTTGAAATTAAGAGCTCTTCAACGGCAATCATATACACATTACTTCTATGAAGCCACTGTTGGAGCTGGTCTCCCAATTATCAATACATTACAAGGGCTCCTAGAAACAGGGGACAAAATATTGCGTATTGAGGGCATCTTCAGTGGGACTTTGAGTTATATCTTCAACAACTTGGTAGGAAGACGAACCTTTAGTGAGGTGGTGGCTGAGGCAAAGCAGGCAGGGTTTACTGAGCCAGACCCAAGGGATGATCTATCTGGAACAGATGTTTGTAGGAAGGTAATAATTCTTGCAAGGGAATCTGGTCTTAAGCTGGAACTCTCTGACATCCCTGTTGAAAGCCTCGTGCCAGAACCATTGAAGGATAGTGCATCAGCTGAGGAATTCATGCAGAAACTTCCACAATTCGATCATGACTTGGCTAAGAAAAGACAGATTGCCGAGGATGCAGGGGAAGTCTTGAGATACGTTGGGGTGGTTGATGTAGTCAACCAGAAGGGGGTAGTGAAGCTGCAAGCATACAAAAACGATCACCCATTTGCTCAATTATCAGGGGCAGATAATATCATTGCTTTCACAACAACAAGGTACAAAGATCAGCCGCTAATAGTCCGCGGACCAGGAGCTGGTGCTGAAGTTACAGCTGGTGGAGTCTTCAGTGACATACTGAGGCTTGCTTCATATCTTGGTGCCCCATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

914

Amino Acids

99.78

Weight (kDa)

7.86

Isoelectric Point (pI)

34.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 86 - 367 1.7e-43 Amino acid kinase family
ACT_7 PF13840 403 - 465 5.6e-06 ACT domain
ACT_9 PF22468 408 - 468 4.7e-18 ACT domain
ACT_7 PF13840 483 - 547 2.4e-09 ACT domain
ACT_9 PF22468 490 - 549 1.4e-21 ACT domain
ACT PF01842 496 - 536 4e-06 ACT domain
NAD_binding_3 PF03447 562 - 698 2.3e-21 Homoserine dehydrogenase, NAD binding domain
Homoserine_dh PF00742 706 - 904 3.7e-52 Homoserine dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2732
AccB7I CCANNNNNTGG 3 cut(s) 1174, 1486, 2669
AccBSI CCGCTC 2 cut(s) 1140, 1631
AccII CGCG 2 cut(s) 96, 2658
AclI AACGTT 1 cut(s) 1101
AclWI GGATC 1 cut(s) 731
AcoI YGGCCR 1 cut(s) 1477
AcsI RAATTY 5 cut(s) 266, 1131, 1880, 2020, 2426
AcuI CTGAAG 5 cut(s) 189, 1007, 2167, 2683, 2697
AcyI GRCGYC 2 cut(s) 5, 1426
AfaI GTAC 9 cut(s) 392, 779, 829, 1054, 1261, 1495, 1580, 1896, 2633
AfeI AGCGCT 1 cut(s) 116
AfiI CCNNNNNNNGG 7 cut(s) 1174, 1363, 1486, 1534, 1630, 2542, 2669
AflII CTTAAG 2 cut(s) 1742, 2351
AflIII ACRYGT 1 cut(s) 1993
AhdI GACNNNNNGTC 1 cut(s) 253
AjnI CCWGG 8 cut(s) 959, 1010, 1120, 1255, 1498, 1527, 1687, 2662
AjuI GAANNNNNNNTTGG 2 cut(s) 2085, 2117
AleI CACNNNNGTG 1 cut(s) 281
Alw21I GWGCWC 2 cut(s) 898, 2059
Alw26I GTCTC 5 cut(s) 148, 364, 414, 1805, 2117
AlwI GGATC 1 cut(s) 731
AlwNI CAGNNNCTG 2 cut(s) 643, 2669
Aor51HI AGCGCT 1 cut(s) 116
AoxI GGCC 5 cut(s) 1008, 1215, 1477, 1620, 2027
ApaI GGGCCC 1 cut(s) 1624
ApeKI GCWGC 6 cut(s) 437, 881, 1469, 1733, 1888, 2554
ApoI RAATTY 5 cut(s) 266, 1131, 1880, 2020, 2426
ArsI GACNNNNNNTTYG 2 cut(s) 1786, 1818
AseI ATTAAT 1 cut(s) 303
Asp700I GAANNNNTTC 1 cut(s) 1103
AspLEI GCGC 2 cut(s) 98, 117
AspS9I GGNCC 8 cut(s) 955, 1165, 1216, 1620, 1621, 1685, 2027, 2660
AsuC2I CCSGG 1 cut(s) 1358
AsuHPI GGTGA 3 cut(s) 257, 1993, 2567
AvaII GGWCC 4 cut(s) 955, 1165, 1685, 2660
BaeGI GKGCMC 3 cut(s) 278, 1624, 2737
BalI TGGCCA 1 cut(s) 1479
BanI GGYRCC 1 cut(s) 2732
BanII GRGCYC 3 cut(s) 1624, 2059, 2142
BauI CACGAG 2 cut(s) 417, 2387
BbsI GAAGAC 3 cut(s) 995, 2230, 2689
Bbv12I GWGCWC 2 cut(s) 898, 2059
BbvCI CCTCAGC 3 cut(s) 111, 2250, 2421
BbvI GCAGC 6 cut(s) 424, 893, 1481, 1720, 1900, 2541
BccI CCATC 8 cut(s) 127, 485, 679, 799, 857, 932, 1064, 1827
BceAI ACGGC 2 cut(s) 1268, 2081
BciT130I CCWGG 8 cut(s) 961, 1012, 1122, 1257, 1500, 1529, 1689, 2664
BciVI GTATCC 1 cut(s) 682
BclI TGATCA 3 cut(s) 727, 1714, 2035
BcnI CCSGG 1 cut(s) 1358
BcoDI GTCTC 5 cut(s) 148, 364, 414, 1805, 2117
BfaI CTAG 9 cut(s) 720, 825, 1266, 1326, 1398, 1641, 1830, 1928, 2144
BfmI CTRYAG 5 cut(s) 879, 946, 1456, 1557, 1665
BfoI RGCGCY 1 cut(s) 118
BfrI CTTAAG 2 cut(s) 1742, 2351
BfuI GTATCC 1 cut(s) 682
BglII AGATCT 1 cut(s) 69
BisI GCNGC 9 cut(s) 94, 438, 882, 1138, 1470, 1734, 1889, 2555, 2645
BlsI GCNGC 9 cut(s) 95, 439, 883, 1139, 1471, 1735, 1890, 2556, 2646
BmcAI AGTACT 1 cut(s) 1495
Bme1390I CCNGG 9 cut(s) 961, 1012, 1122, 1257, 1358, 1500, 1529, 1689, 2664
Bme18I GGWCC 4 cut(s) 955, 1165, 1685, 2660
BmeRI GACNNNNNGTC 1 cut(s) 253
BmgT120I GGNCC 8 cut(s) 955, 1165, 1216, 1620, 1621, 1685, 2027, 2660
BmiI GGNNCC 5 cut(s) 957, 1403, 1622, 2141, 2734
BmrFI CCNGG 9 cut(s) 961, 1012, 1122, 1257, 1358, 1500, 1529, 1689, 2664
BmsI GCATC 7 cut(s) 197, 436, 656, 1054, 2187, 2423, 2479
BpiI GAAGAC 3 cut(s) 995, 2230, 2689
BplI GAGNNNNNCTC 2 cut(s) 2097, 2129
BpmI CTGGAG 1 cut(s) 1521
Bpu10I CCTNAGC 3 cut(s) 111, 2250, 2421
BpuEI CTTGAG 5 cut(s) 766, 788, 1548, 1774, 2524
BpuMI CCSGG 1 cut(s) 1358
BsaAI YACGTR 1 cut(s) 1052
BsaHI GRCGYC 2 cut(s) 5, 1426
BsaI GGTCTC 1 cut(s) 2117
BsaJI CCNNGG 6 cut(s) 959, 1011, 1527, 2285, 2484, 2656
BsaXI ACNNNNNCTCC 6 cut(s) 26, 56, 332, 362, 2124, 2154
Bsc4I CCNNNNNNNGG 7 cut(s) 1174, 1363, 1486, 1534, 1630, 2542, 2669
Bse1I ACTGG 5 cut(s) 648, 817, 1064, 1243, 1789
Bse3DI GCAATG 4 cut(s) 372, 1677, 1953, 2610
BseBI CCWGG 8 cut(s) 961, 1012, 1122, 1257, 1500, 1529, 1689, 2664
BseDI CCNNGG 6 cut(s) 959, 1011, 1527, 2285, 2484, 2656
BseGI GGATG 9 cut(s) 138, 215, 690, 1045, 1080, 1162, 2296, 2370, 2494
BseLI CCNNNNNNNGG 7 cut(s) 1174, 1363, 1486, 1534, 1630, 2542, 2669
BseMI GCAATG 4 cut(s) 372, 1677, 1953, 2610
BseNI ACTGG 5 cut(s) 648, 817, 1064, 1243, 1789
BseSI GKGCMC 3 cut(s) 278, 1624, 2737
BseXI GCAGC 6 cut(s) 424, 893, 1481, 1720, 1900, 2541
BseYI CCCAGC 1 cut(s) 1421
BsgI GTGCAG 3 cut(s) 1101, 1907, 1921
Bsh1236I CGCG 2 cut(s) 96, 2658
BshFI GGCC 5 cut(s) 1010, 1217, 1479, 1622, 2029
BshNI GGYRCC 1 cut(s) 2732
BsiHKAI GWGCWC 2 cut(s) 898, 2059
BsiSI CCGG 1 cut(s) 1358
BslFI GGGAC 3 cut(s) 1340, 2168, 2203
BslI CCNNNNNNNGG 7 cut(s) 1174, 1363, 1486, 1534, 1630, 2542, 2669
BsmAI GTCTC 5 cut(s) 148, 364, 414, 1805, 2117
BsmBI CGTCTC 2 cut(s) 414, 1805
BsmFI GGGAC 3 cut(s) 1340, 2168, 2203
BsmI GAATGC 1 cut(s) 1423
BsnI GGCC 5 cut(s) 1010, 1217, 1479, 1622, 2029
Bso31I GGTCTC 1 cut(s) 2117
Bsp120I GGGCCC 1 cut(s) 1620
Bsp1286I GDGCHC 6 cut(s) 278, 898, 1624, 2059, 2142, 2737
Bsp1407I TGTACA 1 cut(s) 1894
BspANI GGCC 5 cut(s) 1010, 1217, 1479, 1622, 2029
BspFNI CGCG 2 cut(s) 96, 2658
BspHI TCATGA 1 cut(s) 2455
BspLI GGNNCC 5 cut(s) 957, 1403, 1622, 2141, 2734
BspMAI CTGCAG 1 cut(s) 883
BspPI GGATC 1 cut(s) 731
BspQI GCTCTTC 2 cut(s) 1147, 2064
BspT107I GGYRCC 1 cut(s) 2732
BspTI CTTAAG 2 cut(s) 1742, 2351
BspTNI GGTCTC 1 cut(s) 2117
BsrBI CCGCTC 2 cut(s) 1140, 1631
BsrDI GCAATG 4 cut(s) 372, 1677, 1953, 2610
BsrGI TGTACA 1 cut(s) 1894
BsrI ACTGG 5 cut(s) 648, 817, 1064, 1243, 1789
BssECI CCNNGG 6 cut(s) 959, 1011, 1527, 2285, 2484, 2656
BssNI GRCGYC 2 cut(s) 5, 1426
BssSI CACGAG 2 cut(s) 417, 2387
BssT1I CCWWGG 1 cut(s) 2285
Bst2BI CACGAG 2 cut(s) 417, 2387
Bst2UI CCWGG 8 cut(s) 961, 1012, 1122, 1257, 1500, 1529, 1689, 2664
Bst4CI ACNGT 5 cut(s) 251, 1457, 1591, 1924, 2101
Bst6I CTCTTC 5 cut(s) 208, 851, 1147, 1743, 2064
BstACI GRCGYC 2 cut(s) 5, 1426
BstAFI CTTAAG 2 cut(s) 1742, 2351
BstAPI GCANNNNNTGC 1 cut(s) 446
BstAUI TGTACA 1 cut(s) 1894
BstBAI YACGTR 1 cut(s) 1052
BstC8I GCNNGC 5 cut(s) 1554, 1960, 2262, 2559, 2718
BstDSI CCRYGG 1 cut(s) 2656
BstENI CCTNNNNNAGG 1 cut(s) 1532
BstF5I GGATG 9 cut(s) 138, 215, 690, 1045, 1080, 1162, 2296, 2370, 2494
BstFNI CGCG 2 cut(s) 96, 2658
BstH2I RGCGCY 1 cut(s) 118
BstHHI GCGC 2 cut(s) 98, 117
BstMAI GTCTC 5 cut(s) 148, 364, 414, 1805, 2117
BstMWI GCNNNNNNNGC 7 cut(s) 135, 446, 581, 1418, 1628, 2261, 2489
BstNI CCWGG 8 cut(s) 961, 1012, 1122, 1257, 1500, 1529, 1689, 2664
BstNSI RCATGY 2 cut(s) 1895, 1997
BstSCI CCNGG 9 cut(s) 959, 1010, 1120, 1255, 1356, 1498, 1527, 1687, 2662
BstSFI CTRYAG 5 cut(s) 879, 946, 1456, 1557, 1665
BstSLI GKGCMC 3 cut(s) 278, 1624, 2737
BstUI CGCG 2 cut(s) 96, 2658
BstV1I GCAGC 6 cut(s) 424, 893, 1481, 1720, 1900, 2541
BstV2I GAAGAC 3 cut(s) 995, 2230, 2689
BstX2I RGATCY 1 cut(s) 69
BstXI CCANNNNNNTGG 1 cut(s) 1970
BstYI RGATCY 1 cut(s) 69
BsuI GTATCC 1 cut(s) 682
BsuRI GGCC 5 cut(s) 1010, 1217, 1479, 1622, 2029
BtgI CCRYGG 1 cut(s) 2656
BtsCI GGATG 9 cut(s) 138, 215, 690, 1045, 1080, 1162, 2296, 2370, 2494
BtsI GCAGTG 2 cut(s) 984, 1388
BtsIMutI CAGTG 5 cut(s) 984, 1388, 2097, 2191, 2707
Cac8I GCNNGC 5 cut(s) 1554, 1960, 2262, 2559, 2718
CaiI CAGNNNCTG 2 cut(s) 643, 2669
CciI TCATGA 1 cut(s) 2455
CfoI GCGC 2 cut(s) 98, 117
Cfr13I GGNCC 8 cut(s) 955, 1165, 1216, 1620, 1621, 1685, 2027, 2660
Cfr42I CCGCGG 1 cut(s) 2659
CseI GACGC 1 cut(s) 1415
Csp6I GTAC 9 cut(s) 391, 778, 828, 1053, 1260, 1494, 1579, 1895, 2632
CviAII CATG 8 cut(s) 581, 617, 889, 1892, 1898, 1994, 2431, 2456
CviQI GTAC 9 cut(s) 391, 778, 828, 1053, 1260, 1494, 1579, 1895, 2632
DriI GACNNNNNGTC 1 cut(s) 253
EaeI YGGCCR 1 cut(s) 1477
Eam1104I CTCTTC 5 cut(s) 208, 851, 1147, 1743, 2064
Eam1105I GACNNNNNGTC 1 cut(s) 253
EarI CTCTTC 5 cut(s) 208, 851, 1147, 1743, 2064
Ecl136II GAGCTC 1 cut(s) 2057
Eco130I CCWWGG 1 cut(s) 2285
Eco147I AGGCCT 1 cut(s) 1010
Eco24I GRGCYC 3 cut(s) 1624, 2059, 2142
Eco31I GGTCTC 1 cut(s) 2117
Eco32I GATATC 2 cut(s) 27, 1317
Eco47I GGWCC 4 cut(s) 955, 1165, 1685, 2660
Eco47III AGCGCT 1 cut(s) 116
Eco53kI GAGCTC 1 cut(s) 2057
Eco57I CTGAAG 5 cut(s) 189, 1007, 2167, 2683, 2697
EcoICRI GAGCTC 1 cut(s) 2057
EcoNI CCTNNNNNAGG 1 cut(s) 1532
EcoO109I RGGNCCY 3 cut(s) 1620, 1621, 2027
EcoRI GAATTC 2 cut(s) 2020, 2426
EcoRII CCWGG 8 cut(s) 959, 1010, 1120, 1255, 1498, 1527, 1687, 2662
EcoRV GATATC 2 cut(s) 27, 1317
EcoT14I CCWWGG 1 cut(s) 2285
EcoT38I GRGCYC 3 cut(s) 1624, 2059, 2142
ErhI CCWWGG 1 cut(s) 2285
Esp3I CGTCTC 2 cut(s) 414, 1805
FaeI CATG 8 cut(s) 584, 620, 892, 1895, 1901, 1997, 2434, 2459
FalI AAGNNNNNCTT 6 cut(s) 59, 91, 219, 251, 540, 572
FaqI GGGAC 3 cut(s) 1340, 2168, 2203
FatI CATG 8 cut(s) 580, 616, 888, 1891, 1897, 1993, 2430, 2455
FauI CCCGC 1 cut(s) 1596
FbaI TGATCA 3 cut(s) 727, 1714, 2035
Fnu4HI GCNGC 9 cut(s) 94, 438, 882, 1138, 1470, 1734, 1889, 2555, 2645
FokI GGATG 9 cut(s) 145, 202, 697, 1032, 1067, 1169, 2303, 2357, 2501
FriOI GRGCYC 3 cut(s) 1624, 2059, 2142
Fsp4HI GCNGC 9 cut(s) 94, 438, 882, 1138, 1470, 1734, 1889, 2555, 2645
FspBI CTAG 9 cut(s) 720, 825, 1266, 1326, 1398, 1641, 1830, 1928, 2144
GlaI GCGC 2 cut(s) 97, 116
GluI GCNGC 9 cut(s) 94, 438, 882, 1138, 1470, 1734, 1889, 2555, 2645
GsaI CCCAGC 1 cut(s) 1425
GsuI CTGGAG 1 cut(s) 1521
HaeII RGCGCY 1 cut(s) 118
HaeIII GGCC 5 cut(s) 1010, 1217, 1479, 1622, 2029
HapII CCGG 1 cut(s) 1358
HgaI GACGC 1 cut(s) 1415
HhaI GCGC 2 cut(s) 98, 117
Hin1I GRCGYC 2 cut(s) 5, 1426
Hin1II CATG 8 cut(s) 584, 620, 892, 1895, 1901, 1997, 2434, 2459
Hin6I GCGC 2 cut(s) 96, 115
HinP1I GCGC 2 cut(s) 96, 115
HincII GTYRAC 4 cut(s) 712, 1822, 1933, 2533
HindII GTYRAC 4 cut(s) 712, 1822, 1933, 2533
HindIII AAGCTT 1 cut(s) 1410
HinfI GANTC 9 cut(s) 200, 335, 590, 982, 1178, 1903, 1946, 2342, 2694
HpaI GTTAAC 1 cut(s) 712
HpaII CCGG 1 cut(s) 1358
HphI GGTGA 3 cut(s) 257, 1993, 2567
Hpy166II GTNNAC 8 cut(s) 712, 830, 1165, 1636, 1822, 1933, 2271, 2533
Hpy8I GTNNAC 8 cut(s) 712, 830, 1165, 1636, 1822, 1933, 2271, 2533
Hpy99I CGWCG 3 cut(s) 10, 19, 22
HpyAV CCTTC 6 cut(s) 1192, 1226, 1357, 2314, 2398, 2533
HpyCH4III ACNGT 5 cut(s) 251, 1457, 1591, 1924, 2101
HpyCH4IV ACGT 4 cut(s) 1051, 1101, 1548, 2511
HpyF10VI GCNNNNNNNGC 7 cut(s) 135, 446, 581, 1418, 1628, 2261, 2489
HpySE526I ACGT 4 cut(s) 1051, 1101, 1548, 2511
Hsp92I GRCGYC 2 cut(s) 5, 1426
Hsp92II CATG 8 cut(s) 584, 620, 892, 1895, 1901, 1997, 2434, 2459
HspAI GCGC 2 cut(s) 96, 115
Ksp22I TGATCA 3 cut(s) 727, 1714, 2035
KspAI GTTAAC 1 cut(s) 712
KspI CCGCGG 1 cut(s) 2659
LguI GCTCTTC 2 cut(s) 1147, 2064
LmnI GCTCC 3 cut(s) 2105, 2145, 2666
Lsp1109I GCAGC 6 cut(s) 424, 893, 1481, 1720, 1900, 2541
LweI GCATC 7 cut(s) 197, 436, 656, 1054, 2187, 2423, 2479
MaeI CTAG 9 cut(s) 720, 825, 1266, 1326, 1398, 1641, 1830, 1928, 2144
MaeII ACGT 4 cut(s) 1051, 1101, 1548, 2511
MbiI CCGCTC 2 cut(s) 1140, 1631
MflI RGATCY 1 cut(s) 69
MhlI GDGCHC 6 cut(s) 278, 898, 1624, 2059, 2142, 2737
MlsI TGGCCA 1 cut(s) 1479
MluNI TGGCCA 1 cut(s) 1479
MlyI GAGTC 4 cut(s) 194, 344, 1940, 2703
MmeI TCCRAC 3 cut(s) 318, 1663, 2083
Mox20I TGGCCA 1 cut(s) 1479
MroXI GAANNNNTTC 1 cut(s) 1103
MscI TGGCCA 1 cut(s) 1479
MslI CAYNNNNRTG 3 cut(s) 281, 1896, 1968
Msp20I TGGCCA 1 cut(s) 1479
MspA1I CMGCKG 6 cut(s) 476, 1472, 1943, 2420, 2658, 2687
MspCI CTTAAG 2 cut(s) 1742, 2351
MspI CCGG 1 cut(s) 1358
MspR9I CCNGG 9 cut(s) 961, 1012, 1122, 1257, 1358, 1500, 1529, 1689, 2664
Mva1269I GAATGC 1 cut(s) 1423
MvaI CCWGG 8 cut(s) 961, 1012, 1122, 1257, 1500, 1529, 1689, 2664
MvnI CGCG 2 cut(s) 96, 2658
MwoI GCNNNNNNNGC 7 cut(s) 135, 446, 581, 1418, 1628, 2261, 2489
NciI CCSGG 1 cut(s) 1358
NlaIII CATG 8 cut(s) 584, 620, 892, 1895, 1901, 1997, 2434, 2459
NlaIV GGNNCC 5 cut(s) 957, 1403, 1622, 2141, 2734
NmeAIII GCCGAG 1 cut(s) 2509
NmuCI GTSAC 5 cut(s) 193, 245, 869, 1999, 2702
NspI RCATGY 2 cut(s) 1895, 1997
OliI CACNNNNGTG 1 cut(s) 281
PagI TCATGA 1 cut(s) 2455
PceI AGGCCT 1 cut(s) 1010
PciI ACATGT 1 cut(s) 1993
PciSI GCTCTTC 2 cut(s) 1147, 2064
PcsI WCGNNNNNNNCGW 2 cut(s) 14, 20
PctI GAATGC 1 cut(s) 1423
PdmI GAANNNNTTC 1 cut(s) 1103
PfeI GAWTC 5 cut(s) 590, 982, 1178, 1903, 2342
PflFI GACNNNGTC 2 cut(s) 994, 1949
PflMI CCANNNNNTGG 3 cut(s) 1174, 1486, 2669
PfoI TCCNGGA 2 cut(s) 1356, 1498
PkrI GCNGC 9 cut(s) 95, 439, 883, 1139, 1471, 1735, 1890, 2556, 2646
PleI GAGTC 4 cut(s) 194, 343, 1940, 2702
PpsI GAGTC 4 cut(s) 194, 343, 1940, 2702
Ppu21I YACGTR 1 cut(s) 1052
PscI ACATGT 1 cut(s) 1993
PshBI ATTAAT 1 cut(s) 303
Psp124BI GAGCTC 1 cut(s) 2059
Psp1406I AACGTT 1 cut(s) 1101
Psp6I CCWGG 8 cut(s) 959, 1010, 1120, 1255, 1498, 1527, 1687, 2662
PspFI CCCAGC 1 cut(s) 1421
PspGI CCWGG 8 cut(s) 959, 1010, 1120, 1255, 1498, 1527, 1687, 2662
PspN4I GGNNCC 5 cut(s) 957, 1403, 1622, 2141, 2734
PspOMI GGGCCC 1 cut(s) 1620
PspPI GGNCC 8 cut(s) 955, 1165, 1216, 1620, 1621, 1685, 2027, 2660
PstI CTGCAG 1 cut(s) 883
PstNI CAGNNNCTG 2 cut(s) 643, 2669
PsuI RGATCY 1 cut(s) 69
PsyI GACNNNGTC 2 cut(s) 994, 1949
PvuII CAGCTG 4 cut(s) 476, 1943, 2420, 2687
RsaI GTAC 9 cut(s) 392, 779, 829, 1054, 1261, 1495, 1580, 1896, 2633
RsaNI GTAC 9 cut(s) 391, 778, 828, 1053, 1260, 1494, 1579, 1895, 2632
RseI CAYNNNNRTG 3 cut(s) 281, 1896, 1968
SacI GAGCTC 1 cut(s) 2059
SacII CCGCGG 1 cut(s) 2659
SapI GCTCTTC 2 cut(s) 1147, 2064
SatI GCNGC 9 cut(s) 94, 438, 882, 1138, 1470, 1734, 1889, 2555, 2645
Sau96I GGNCC 8 cut(s) 955, 1165, 1216, 1620, 1621, 1685, 2027, 2660
ScaI AGTACT 1 cut(s) 1495
SchI GAGTC 4 cut(s) 194, 344, 1940, 2703
ScrFI CCNGG 9 cut(s) 961, 1012, 1122, 1257, 1358, 1500, 1529, 1689, 2664
SduI GDGCHC 6 cut(s) 278, 898, 1624, 2059, 2142, 2737
SfaNI GCATC 7 cut(s) 197, 436, 656, 1054, 2187, 2423, 2479
SfcI CTRYAG 5 cut(s) 879, 946, 1456, 1557, 1665
Sfr303I CCGCGG 1 cut(s) 2659
SgrBI CCGCGG 1 cut(s) 2659
SinI GGWCC 4 cut(s) 955, 1165, 1685, 2660
SmiMI CAYNNNNRTG 3 cut(s) 281, 1896, 1968
SmlI CTYRAG 7 cut(s) 767, 781, 1563, 1742, 1789, 2351, 2503
SmoI CTYRAG 7 cut(s) 767, 781, 1563, 1742, 1789, 2351, 2503
SseBI AGGCCT 1 cut(s) 1010
SspI AATATT 2 cut(s) 1543, 2163
SspMI CTAG 9 cut(s) 720, 825, 1266, 1326, 1398, 1641, 1830, 1928, 2144
SstI GAGCTC 1 cut(s) 2059
StuI AGGCCT 1 cut(s) 1010
StyD4I CCNGG 9 cut(s) 959, 1010, 1120, 1255, 1356, 1498, 1527, 1687, 2662
StyI CCWWGG 1 cut(s) 2285
TaaI ACNGT 5 cut(s) 251, 1457, 1591, 1924, 2101
TaiI ACGT 4 cut(s) 1054, 1104, 1551, 2514
TaqI TCGA 4 cut(s) 480, 747, 1655, 2451
TatI WGTACW 4 cut(s) 827, 1493, 1578, 1894
TauI GCSGC 3 cut(s) 96, 1140, 2647
TfiI GAWTC 5 cut(s) 590, 982, 1178, 1903, 2342
TscAI CASTG 5 cut(s) 984, 1395, 2104, 2191, 2707
TseFI GTSAC 5 cut(s) 193, 245, 869, 1999, 2702
TseI GCWGC 6 cut(s) 437, 881, 1469, 1733, 1888, 2554
Tsp45I GTSAC 5 cut(s) 193, 245, 869, 1999, 2702
TspDTI ATGAA 6 cut(s) 251, 513, 1173, 2106, 2419, 2712
TspGWI ACGGA 1 cut(s) 1394
TspRI CASTG 5 cut(s) 984, 1395, 2104, 2191, 2707
Tth111I GACNNNGTC 2 cut(s) 994, 1949
Van91I CCANNNNNTGG 3 cut(s) 1174, 1486, 2669
Vha464I CTTAAG 2 cut(s) 1742, 2351
VpaK11BI GGWCC 4 cut(s) 955, 1165, 1685, 2660
VspI ATTAAT 1 cut(s) 303
XagI CCTNNNNNAGG 1 cut(s) 1532
XapI RAATTY 5 cut(s) 266, 1131, 1880, 2020, 2426
XbaI TCTAGA 2 cut(s) 1640, 1829
XceI RCATGY 2 cut(s) 1895, 1997
XcmI CCANNNNNNNNNTGG 1 cut(s) 1669
XmnI GAANNNNTTC 1 cut(s) 1103
XspI CTAG 9 cut(s) 720, 825, 1266, 1326, 1398, 1641, 1830, 1928, 2144
ZrmI AGTACT 1 cut(s) 1495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.