Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002838

Physical Location & Seq

Genomic Coordinates Reverse (-)

42055075 .. 42059519

Gene Structure 4445 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0273300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGGAAGCAACACGAGAGCAGTGGGAGGAGAATGAGGAAGTGGGCATGGACTTGCGAGGAAGGCCGCCTCGCCAAATCATCAACACGATCACTAGTGGTGAACATGTTGTCTGTTCCTCACAGAGTTCAAGTGAAGCTGAATCTCTCAATGCAGAGGAGGAGGAAGAAGAAGCTAAGGGAAGCCCAAGAAATGGTTTTCGCATGGTCTCTGACAAAAATGGTACTGAATCCTCATATGCGTCTGGTTTCAATGGTGGAGAAGTTGAGTATCTTATTTCCAAGAAAATTTCTGGGAGTGAAATAGTGGCTAGTGAAGTAGAGAGTCTAAGCTTTCAAAAGAGTGTTGAAGCCAAGCGTCAAGATGATGACTATATTAAGTTGAAGGATGAAGAGTTACCTGGTTTTGGTGCTTTACCAGGAGAAGTTGAGTATCTTATTTCCAAGACAATTTCTGGGAGTGAAATAGTGGCTAGTGAAGTAGAGAGTCTAAGCTTTCAAAAGAGTGTTGAAGCCAAGCGTCAAGATGATGACTATATTAAGTTGAAGGATGAAGAGTTACCTGGTTTTGGTGCTTTACCTTCCACGCAGTCCATTGAGCAAAATGAACGCTCTGCTTCTCTGGAAAATGGAAAGGCTGAACACGGGAAAGTTAAGTTGAGAGACATAAGTGAGCAAGAAGTGTCTGAATTGTATCTTGAGAGGGTATATGAGAAGCCGGCTGCGCATGAATTCTACTGTCCTAATTGCAATTCTTGCATCACCAAGGTTCTTATCCGTGAGAGAGAATTGGAGAATAGACCTGAAACTATACCACTTCCTGAGCCAATTGATACAATTAGATGCACTTCGTGCTTTAGTTTCCTCATTCCTGCAGGCAATTGGTTCTTTCTCAAAGCAGTAGCCAAAGAAGAGGAACATCCGACAGTTCAAGGAATCAATATTGAAGACAATGTTGGAGCTTCTGTTCCATCATATGATTCTAACGGAACAATACAAGATCAAAATAGTCAAGTTGCATCAGTAGGTAAGGGCTCACTGTCTAATGAGTATATTGGACCGTCAAGAAATAATCTTGACAGCAGAATTGGAGTTGAATTGCCAGTTTCACCACAAGACTCGAAGGAAACATTATATGATAAAAGACCTCCAACGCCTGCTCAGTCAATTGGAATTAATCAAGCTGTATCAGTAGATAAAGCTCCAGAGCCCTATCTCGAGAGTAGAGTTGGAGTTGAATTGCCAGTTTCACCACAAGACTCGAATGAAACATTTTATTATCAAAATCCTCCAATGCCTGCTCAGTCAGATGGAGGTAGTGAAGCCACGTTGATTGGTAAAGCTCCAGAGCCCTATCTCGAGAGTAGAGTTGGAGTTGAATTGCCAGTTTCACCACAAGACTCGAAAGAAACATTTAATGATCAAAATCCTCCAATGCCTGCTCAGTCAGTTGGAGTTAGTGAAGCCTTGTTGATTGATAAAGCTCCAGTTCCTGGTGACTTTGTTGAAGCTAGCATTAATGGAGTTCAGGTGCCAGTTCCATCATATGACTCTAATGGAACATTACATGATCAAAAATCTCCATTGCCTGGTCAGTCGGTTGTTAGCATAACTGTTACAACTCAGCCACCAGCACCTGAAATAGATGATGCAGGGCCAGCTGAAACAAAACCTCGTGAGAGCACAACAGTCATTATTAGATCAGGTGGACCAACAATAATATCTGAACCAAGTGATGCCAAAACCTTTGAAATCCTCAAAAGCATCGTATATGGAGGTTTAACTGAAGCAATTGCAAGCTTAAGCATTGTGACATCTGCCGCTAGTGCTGGTACTGCCACATTGAACATTCTAGCTTTGGCCTTGGCAAACTTGCTGGGTGGTCTTTTCATCATTGGACACCACCTTTGGGAACTGAAAGTCGATCAATCAAGAGTTACCTCCGGTGAAACAGATGAACAAGTGGATAGATATGAAGAAGTACTGGGGAAAAGAGAGAATTTTTTTCTTCATGCCTCAGTTGCCATATTATCGTTCCTCATTTTCGGATTAGTACCTCCTTTGGTTTATTGCTTCTCATTCCGTCAGAGCAATGACACGGACCTAAAGCTTGCAGTAGTTGCCGCATCTTCCCTCTTATGCATCATACTTCTTTCAACTGGTAAGGCTTACATCCAGAGGCCACAAAAGTACATGAAAACTTTGCTGTACTATATCATCATTGGGGTTGGGGCTGCCGGTATTTCTTACTTAGCAGGCGACCTGATTGACAAACTTATAGAGAAGCTTGGCTGGTTCAACTCAACTGTGTCTGGCACTCTGCCTCTCCCTCAGATGAGTATAGTGAAGCCTGCATGGAAATCCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0012505 GO:0016020 GO:0016021 GO:0030176 GO:0031224 GO:0031227 GO:0031984 GO:0032991 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0072546 GO:0098796 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF2012

Protein Analysis

788

Amino Acids

85.69

Weight (kDa)

4.62

Isoelectric Point (pI)

53.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VIT1	PF01988	668 - 752	1.1e-07	VIT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32140
fragaria_vesca	FvH4_2g28780 FvH4_2g28780 FvH4_2g28780 FvH4_2g41280 FvH4_2g41280
malus_domestica	MD08G1052500.v1.1 MD08G1157100.v1.1 MD15G1043000.v1.1 MD15G1128200.v1.1
prunus_persica	Prupe.1G396300_v2.0.a1 Prupe.1G396300_v2.0.a1 Prupe.1G483500_v2.0.a1 Prupe.1G483500_v2.0.a1 Prupe.1G483500_v2.0.a1 Prupe.1G483500_v2.0.a1
pyrus_communis	pycom08g04380 pycom08g12940 pycom15g11540
rosa_chinensis	RchiOBHm_Chr6g0297541 RchiOBHm_Chr6g0299221
rosa_laevigata	RLG00000011452 RLG00000011585
rosa_multiflora	Rmu_ssc0000319.1_g000003
rosa_roxburghii	Rroxscaffold_7G00168900 Rroxscaffold_7G00170380
rosa_rugosa	Rorug06G0273300 Rorug06G0273400 Rorug06G0286300
rosa_samantha	Rh6AG384400 Rh6AG397500 Rh6BG392500 Rh6BG406100 Rh6CG398400 Rh6CG412200 Rh6DG384900 Rh6DG398900
rosa_wichuraiana	Rw6G033480 Rw6G034800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	723
AccB1I	GGYRCC	1 cut(s)	1528
AccB7I	CCANNNNNTGG	3 cut(s)	191, 1490, 1586
AciI	CCGC	3 cut(s)	65, 1818, 2121
AcsI	RAATTY	3 cut(s)	285, 728, 1996
AcuI	CTGAAG	1 cut(s)	1803
AdeI	CACNNNGTG	1 cut(s)	849
AfaI	GTAC	6 cut(s)	223, 1831, 1980, 2052, 2189, 2207
AfiI	CCNNNNNNNGG	6 cut(s)	191, 404, 566, 1490, 1586, 1906
AflII	CTTAAG	1 cut(s)	1798
AflIII	ACRYGT	1 cut(s)	103
AhlI	ACTAGT	1 cut(s)	92
AjnI	CCWGG	6 cut(s)	397, 415, 559, 1489, 1585, 2360
AjuI	GAANNNNNNNTTGG	2 cut(s)	936, 968
AloI	GAACNNNNNNTCC	2 cut(s)	948, 980
Alw21I	GWGCWC	1 cut(s)	1682
Alw26I	GTCTC	2 cut(s)	211, 654
AlwNI	CAGNNNCTG	2 cut(s)	1490, 1634
Ama87I	CYCGRG	2 cut(s)	1214, 1355
AoxI	GGCC	4 cut(s)	62, 1652, 1857, 2177
ApeKI	GCWGC	2 cut(s)	719, 2231
ApoI	RAATTY	3 cut(s)	285, 728, 1996
ArsI	GACNNNNNNTTYG	2 cut(s)	1887, 1919
AseI	ATTAAT	2 cut(s)	1173, 1515
AspLEI	GCGC	1 cut(s)	724
AspS9I	GGNCC	4 cut(s)	1055, 1652, 1706, 2098
AsuHPI	GGTGA	7 cut(s)	110, 751, 1098, 1239, 1380, 1505, 1955
AsuNHI	GCTAGC	1 cut(s)	1508
AvaI	CYCGRG	2 cut(s)	1214, 1355
AvaII	GGWCC	3 cut(s)	1055, 1706, 2098
BanI	GGYRCC	1 cut(s)	1528
BanII	GRGCYC	3 cut(s)	1034, 1209, 1350
BauI	CACGAG	2 cut(s)	12, 1671
BbsI	GAAGAC	1 cut(s)	951
Bbv12I	GWGCWC	1 cut(s)	1682
BbvI	GCAGC	2 cut(s)	706, 2218
BccI	CCATC	3 cut(s)	976, 1301, 1546
BciT130I	CCWGG	6 cut(s)	399, 417, 561, 1491, 1587, 2362
BclI	TGATCA	2 cut(s)	1417, 1567
BcoDI	GTCTC	2 cut(s)	211, 654
BcuI	ACTAGT	1 cut(s)	92
BfaI	CTAG	6 cut(s)	93, 309, 471, 1509, 1821, 1850
BfmI	CTRYAG	1 cut(s)	870
BfrI	CTTAAG	1 cut(s)	1798
BisI	GCNGC	5 cut(s)	65, 720, 1818, 2121, 2232
BlsI	GCNGC	5 cut(s)	66, 721, 1819, 2122, 2233
BmcAI	AGTACT	1 cut(s)	1980
Bme1390I	CCNGG	6 cut(s)	399, 417, 561, 1491, 1587, 2362
Bme18I	GGWCC	3 cut(s)	1055, 1706, 2098
BmeT110I	CYCGRG	2 cut(s)	1214, 1355
BmgT120I	GGNCC	4 cut(s)	1055, 1652, 1706, 2098
BmiI	GGNNCC	1 cut(s)	1530
BmrFI	CCNGG	6 cut(s)	399, 417, 561, 1491, 1587, 2362
BmrI	ACTGGG	1 cut(s)	1991
BmsI	GCATC	8 cut(s)	765, 830, 1025, 1636, 1723, 1770, 2132, 2148
BmtI	GCTAGC	1 cut(s)	1512
BmuI	ACTGGG	1 cut(s)	1991
BpiI	GAAGAC	1 cut(s)	951
BpmI	CTGGAG	3 cut(s)	1185, 1326, 1467
Bpu10I	CCTNAGC	2 cut(s)	174, 819
BpuEI	CTTGAG	1 cut(s)	716
BsaBI	GATNNNNATC	1 cut(s)	1422
BsaI	GGTCTC	1 cut(s)	211
BsaJI	CCNNGG	2 cut(s)	762, 1860
BsaWI	WCCGGW	1 cut(s)	1940
BsaXI	ACNNNNNCTCC	4 cut(s)	948, 978, 1512, 1542
Bsc4I	CCNNNNNNNGG	6 cut(s)	191, 404, 566, 1490, 1586, 1906
Bse118I	RCCGGY	2 cut(s)	715, 2234
Bse1I	ACTGG	7 cut(s)	1100, 1241, 1382, 1484, 1532, 1986, 2161
Bse3DI	GCAATG	2 cut(s)	1580, 2095
Bse8I	GATNNNNATC	1 cut(s)	1422
BseBI	CCWGG	6 cut(s)	399, 417, 561, 1491, 1587, 2362
BseDI	CCNNGG	2 cut(s)	762, 1860
BseGI	GGATG	4 cut(s)	391, 553, 916, 2169
BseJI	GATNNNNATC	1 cut(s)	1422
BseLI	CCNNNNNNNGG	6 cut(s)	191, 404, 566, 1490, 1586, 1906
BseMI	GCAATG	2 cut(s)	1580, 2095
BseMII	CTCAG	7 cut(s)	810, 1172, 1313, 1454, 1634, 2028, 2342
BseNI	ACTGG	7 cut(s)	1100, 1241, 1382, 1484, 1532, 1986, 2161
BseRI	GAGGAG	3 cut(s)	41, 170, 173
BseXI	GCAGC	2 cut(s)	706, 2218
BseYI	CCCAGC	1 cut(s)	1873
BshFI	GGCC	4 cut(s)	64, 1654, 1859, 2179
BshNI	GGYRCC	1 cut(s)	1528
BsiHKAI	GWGCWC	1 cut(s)	1682
BsiHKCI	CYCGRG	2 cut(s)	1214, 1355
BsiSI	CCGG	3 cut(s)	716, 1941, 2235
BslI	CCNNNNNNNGG	6 cut(s)	191, 404, 566, 1490, 1586, 1906
BsmAI	GTCTC	2 cut(s)	211, 654
BsnI	GGCC	4 cut(s)	64, 1654, 1859, 2179
Bso31I	GGTCTC	1 cut(s)	211
BsoBI	CYCGRG	2 cut(s)	1214, 1355
Bsp1286I	GDGCHC	4 cut(s)	1034, 1209, 1350, 1682
Bsp143I	GATC	6 cut(s)	87, 997, 1417, 1567, 1697, 1921
BspACI	CCGC	3 cut(s)	65, 1818, 2121
BspANI	GGCC	4 cut(s)	64, 1654, 1859, 2179
BspCNI	CTCAG	7 cut(s)	811, 1171, 1312, 1453, 1633, 2027, 2341
BspLI	GGNNCC	1 cut(s)	1530
BspMAI	CTGCAG	1 cut(s)	874
BspOI	GCTAGC	1 cut(s)	1512
BspT107I	GGYRCC	1 cut(s)	1528
BspTI	CTTAAG	1 cut(s)	1798
BspTNI	GGTCTC	1 cut(s)	211
BsrDI	GCAATG	2 cut(s)	1580, 2095
BsrFI	RCCGGY	2 cut(s)	715, 2234
BsrI	ACTGG	7 cut(s)	1100, 1241, 1382, 1484, 1532, 1986, 2161
BssAI	RCCGGY	2 cut(s)	715, 2234
BssECI	CCNNGG	2 cut(s)	762, 1860
BssMI	GATC	6 cut(s)	87, 997, 1417, 1567, 1697, 1921
BssSI	CACGAG	2 cut(s)	12, 1671
BssT1I	CCWWGG	2 cut(s)	762, 1860
Bst2BI	CACGAG	2 cut(s)	12, 1671
Bst2UI	CCWGG	6 cut(s)	399, 417, 561, 1491, 1587, 2362
Bst4CI	ACNGT	7 cut(s)	737, 925, 1038, 1059, 1612, 1687, 2305
Bst6I	CTCTTC	3 cut(s)	384, 546, 903
BstAFI	CTTAAG	1 cut(s)	1798
BstAPI	GCANNNNNTGC	3 cut(s)	753, 849, 2117
BstF5I	GGATG	4 cut(s)	391, 553, 916, 2169
BstHHI	GCGC	1 cut(s)	724
BstKTI	GATC	6 cut(s)	90, 1000, 1420, 1570, 1700, 1924
BstMAI	GTCTC	2 cut(s)	211, 654
BstMBI	GATC	6 cut(s)	87, 997, 1417, 1567, 1697, 1921
BstMWI	GCNNNNNNNGC	9 cut(s)	61, 721, 753, 849, 1655, 1823, 1832, 2018, 2117
BstNI	CCWGG	6 cut(s)	399, 417, 561, 1491, 1587, 2362
BstNSI	RCATGY	1 cut(s)	107
BstSCI	CCNGG	6 cut(s)	397, 415, 559, 1489, 1585, 2360
BstSFI	CTRYAG	1 cut(s)	870
BstV1I	GCAGC	2 cut(s)	706, 2218
BstV2I	GAAGAC	1 cut(s)	951
BsuRI	GGCC	4 cut(s)	64, 1654, 1859, 2179
BtsCI	GGATG	4 cut(s)	391, 553, 916, 2169
BtsI	GCAGTG	1 cut(s)	26
BtsIMutI	CAGTG	2 cut(s)	26, 1034
CaiI	CAGNNNCTG	2 cut(s)	1490, 1634
CfoI	GCGC	1 cut(s)	724
Cfr10I	RCCGGY	2 cut(s)	715, 2234
Cfr13I	GGNCC	4 cut(s)	1055, 1652, 1706, 2098
CseI	GACGC	3 cut(s)	228, 344, 506
CsiI	ACCWGGT	2 cut(s)	397, 559
Csp6I	GTAC	6 cut(s)	222, 1830, 1979, 2051, 2188, 2206
CspCI	CAANNNNNGTGG	2 cut(s)	1312, 1347
CviAII	CATG	8 cut(s)	46, 104, 202, 725, 1565, 2009, 2191, 2352
CviQI	GTAC	6 cut(s)	222, 1830, 1979, 2051, 2188, 2206
DpnI	GATC	6 cut(s)	89, 999, 1419, 1569, 1699, 1923
DpnII	GATC	6 cut(s)	87, 997, 1417, 1567, 1697, 1921
DraIII	CACNNNGTG	1 cut(s)	849
Eam1104I	CTCTTC	3 cut(s)	384, 546, 903
EarI	CTCTTC	3 cut(s)	384, 546, 903
Eco130I	CCWWGG	2 cut(s)	762, 1860
Eco24I	GRGCYC	3 cut(s)	1034, 1209, 1350
Eco31I	GGTCTC	1 cut(s)	211
Eco47I	GGWCC	3 cut(s)	1055, 1706, 2098
Eco57I	CTGAAG	1 cut(s)	1803
Eco88I	CYCGRG	2 cut(s)	1214, 1355
EcoRI	GAATTC	1 cut(s)	728
EcoRII	CCWGG	6 cut(s)	397, 415, 559, 1489, 1585, 2360
EcoT14I	CCWWGG	2 cut(s)	762, 1860
EcoT22I	ATGCAT	1 cut(s)	2141
EcoT38I	GRGCYC	3 cut(s)	1034, 1209, 1350
ErhI	CCWWGG	2 cut(s)	762, 1860
FaeI	CATG	8 cut(s)	49, 107, 205, 728, 1568, 2012, 2194, 2355
FatI	CATG	8 cut(s)	45, 103, 201, 724, 1564, 2008, 2190, 2351
FauNDI	CATATG	3 cut(s)	235, 973, 1543
FbaI	TGATCA	2 cut(s)	1417, 1567
Fnu4HI	GCNGC	5 cut(s)	65, 720, 1818, 2121, 2232
FokI	GGATG	4 cut(s)	398, 560, 903, 2156
FriOI	GRGCYC	3 cut(s)	1034, 1209, 1350
Fsp4HI	GCNGC	5 cut(s)	65, 720, 1818, 2121, 2232
FspBI	CTAG	6 cut(s)	93, 309, 471, 1509, 1821, 1850
FspI	TGCGCA	1 cut(s)	723
GlaI	GCGC	1 cut(s)	723
GluI	GCNGC	5 cut(s)	65, 720, 1818, 2121, 2232
GsaI	CCCAGC	1 cut(s)	1877
GsuI	CTGGAG	3 cut(s)	1185, 1326, 1467
HaeIII	GGCC	4 cut(s)	64, 1654, 1859, 2179
HapII	CCGG	3 cut(s)	716, 1941, 2235
HgaI	GACGC	3 cut(s)	228, 344, 506
HhaI	GCGC	1 cut(s)	724
Hin1II	CATG	8 cut(s)	49, 107, 205, 728, 1568, 2012, 2194, 2355
Hin6I	GCGC	1 cut(s)	722
HinP1I	GCGC	1 cut(s)	722
HindIII	AAGCTT	5 cut(s)	328, 490, 1795, 2105, 2282
HpaII	CCGG	3 cut(s)	716, 1941, 2235
HphI	GGTGA	7 cut(s)	110, 751, 1098, 1239, 1380, 1505, 1955
Hpy166II	GTNNAC	2 cut(s)	101, 1706
Hpy188I	TCNGA	8 cut(s)	211, 685, 921, 1306, 1723, 2045, 2085, 2331
Hpy8I	GTNNAC	2 cut(s)	101, 1706
HpyAV	CCTTC	5 cut(s)	54, 376, 538, 588, 1114
HpyCH4III	ACNGT	7 cut(s)	737, 925, 1038, 1059, 1612, 1687, 2305
HpyCH4IV	ACGT	1 cut(s)	1325
HpyF10VI	GCNNNNNNNGC	9 cut(s)	61, 721, 753, 849, 1655, 1823, 1832, 2018, 2117
HpySE526I	ACGT	1 cut(s)	1325
Hsp92II	CATG	8 cut(s)	49, 107, 205, 728, 1568, 2012, 2194, 2355
HspAI	GCGC	1 cut(s)	722
KroI	GCCGGC	1 cut(s)	715
KroNI	GCCGGC	1 cut(s)	717
Ksp22I	TGATCA	2 cut(s)	1417, 1567
Kzo9I	GATC	6 cut(s)	87, 997, 1417, 1567, 1697, 1921
LmnI	GCTCC	4 cut(s)	956, 1204, 1345, 1486
Lsp1109I	GCAGC	2 cut(s)	706, 2218
LweI	GCATC	8 cut(s)	765, 830, 1025, 1636, 1723, 1770, 2132, 2148
MabI	ACCWGGT	2 cut(s)	397, 559
MaeI	CTAG	6 cut(s)	93, 309, 471, 1509, 1821, 1850
MaeII	ACGT	1 cut(s)	1325
MaeIII	GTNAC	6 cut(s)	393, 555, 1493, 1612, 1807, 1933
MalI	GATC	6 cut(s)	89, 999, 1419, 1569, 1699, 1923
MboI	GATC	6 cut(s)	87, 997, 1417, 1567, 1697, 1921
MboII	GAAGA	9 cut(s)	176, 179, 401, 563, 920, 956, 1985, 1997, 2118
MfeI	CAATTG	4 cut(s)	825, 877, 1164, 1788
MhlI	GDGCHC	4 cut(s)	1034, 1209, 1350, 1682
MlyI	GAGTC	6 cut(s)	331, 493, 1109, 1250, 1391, 1541
MmeI	TCCRAC	6 cut(s)	934, 944, 1172, 1207, 1348, 1429
Mph1103I	ATGCAT	1 cut(s)	2141
MroNI	GCCGGC	1 cut(s)	715
MseI	TTAA	8 cut(s)	375, 537, 651, 1173, 1413, 1515, 1778, 1799
MspA1I	CMGCKG	1 cut(s)	1658
MspCI	CTTAAG	1 cut(s)	1798
MspI	CCGG	3 cut(s)	716, 1941, 2235
MspR9I	CCNGG	6 cut(s)	399, 417, 561, 1491, 1587, 2362
MunI	CAATTG	4 cut(s)	825, 877, 1164, 1788
MvaI	CCWGG	6 cut(s)	399, 417, 561, 1491, 1587, 2362
MwoI	GCNNNNNNNGC	9 cut(s)	61, 721, 753, 849, 1655, 1823, 1832, 2018, 2117
NaeI	GCCGGC	1 cut(s)	717
NdeI	CATATG	3 cut(s)	235, 973, 1543
NdeII	GATC	6 cut(s)	87, 997, 1417, 1567, 1697, 1921
NgoMIV	GCCGGC	1 cut(s)	715
NheI	GCTAGC	1 cut(s)	1508
NlaIII	CATG	8 cut(s)	49, 107, 205, 728, 1568, 2012, 2194, 2355
NlaIV	GGNNCC	1 cut(s)	1530
NmuCI	GTSAC	2 cut(s)	1493, 1807
NsbI	TGCGCA	1 cut(s)	723
NsiI	ATGCAT	1 cut(s)	2141
NspI	RCATGY	1 cut(s)	107
PaeR7I	CTCGAG	2 cut(s)	1214, 1355
PciI	ACATGT	1 cut(s)	103
PdiI	GCCGGC	1 cut(s)	717
PfeI	GAWTC	4 cut(s)	140, 227, 933, 977
PflMI	CCANNNNNTGG	3 cut(s)	191, 1490, 1586
PkrI	GCNGC	5 cut(s)	66, 721, 1819, 2122, 2233
PleI	GAGTC	6 cut(s)	330, 492, 1109, 1250, 1391, 1541
PpsI	GAGTC	6 cut(s)	330, 492, 1109, 1250, 1391, 1541
PscI	ACATGT	1 cut(s)	103
PshBI	ATTAAT	2 cut(s)	1173, 1515
Psp6I	CCWGG	6 cut(s)	397, 415, 559, 1489, 1585, 2360
PspFI	CCCAGC	1 cut(s)	1873
PspGI	CCWGG	6 cut(s)	397, 415, 559, 1489, 1585, 2360
PspN4I	GGNNCC	1 cut(s)	1530
PspPI	GGNCC	4 cut(s)	1055, 1652, 1706, 2098
PstI	CTGCAG	1 cut(s)	874
PstNI	CAGNNNCTG	2 cut(s)	1490, 1634
PvuII	CAGCTG	1 cut(s)	1658
RsaI	GTAC	6 cut(s)	223, 1831, 1980, 2052, 2189, 2207
RsaNI	GTAC	6 cut(s)	222, 1830, 1979, 2051, 2188, 2206
SaqAI	TTAA	8 cut(s)	375, 537, 651, 1173, 1413, 1515, 1778, 1799
SatI	GCNGC	5 cut(s)	65, 720, 1818, 2121, 2232
Sau3AI	GATC	6 cut(s)	87, 997, 1417, 1567, 1697, 1921
Sau96I	GGNCC	4 cut(s)	1055, 1652, 1706, 2098
SbfI	CCTGCAGG	1 cut(s)	874
ScaI	AGTACT	1 cut(s)	1980
SchI	GAGTC	6 cut(s)	331, 493, 1109, 1250, 1391, 1541
ScrFI	CCNGG	6 cut(s)	399, 417, 561, 1491, 1587, 2362
SdaI	CCTGCAGG	1 cut(s)	874
SduI	GDGCHC	4 cut(s)	1034, 1209, 1350, 1682
SexAI	ACCWGGT	2 cut(s)	397, 559
SfaNI	GCATC	8 cut(s)	765, 830, 1025, 1636, 1723, 1770, 2132, 2148
SfcI	CTRYAG	1 cut(s)	870
Sfr274I	CTCGAG	2 cut(s)	1214, 1355
SinI	GGWCC	3 cut(s)	1055, 1706, 2098
SlaI	CTCGAG	2 cut(s)	1214, 1355
SmlI	CTYRAG	4 cut(s)	695, 1214, 1355, 1798
SmoI	CTYRAG	4 cut(s)	695, 1214, 1355, 1798
SpeI	ACTAGT	1 cut(s)	92
Sse8387I	CCTGCAGG	1 cut(s)	874
SsiI	CCGC	3 cut(s)	65, 1818, 2121
SspI	AATATT	1 cut(s)	940
SspMI	CTAG	6 cut(s)	93, 309, 471, 1509, 1821, 1850
StyD4I	CCNGG	6 cut(s)	397, 415, 559, 1489, 1585, 2360
StyI	CCWWGG	2 cut(s)	762, 1860
TaaI	ACNGT	7 cut(s)	737, 925, 1038, 1059, 1612, 1687, 2305
TaiI	ACGT	1 cut(s)	1328
TaqI	TCGA	6 cut(s)	1118, 1215, 1259, 1356, 1400, 1920
TatI	WGTACW	3 cut(s)	1978, 2187, 2205
TauI	GCSGC	3 cut(s)	67, 1820, 2123
TfiI	GAWTC	4 cut(s)	140, 227, 933, 977
Tru1I	TTAA	8 cut(s)	375, 537, 651, 1173, 1413, 1515, 1778, 1799
Tru9I	TTAA	8 cut(s)	375, 537, 651, 1173, 1413, 1515, 1778, 1799
TscAI	CASTG	2 cut(s)	26, 1041
TseFI	GTSAC	2 cut(s)	1493, 1807
TseI	GCWGC	2 cut(s)	719, 2231
Tsp45I	GTSAC	2 cut(s)	1493, 1807
TspGWI	ACGGA	4 cut(s)	764, 999, 2069, 2111
TspRI	CASTG	2 cut(s)	26, 1041
Van91I	CCANNNNNTGG	3 cut(s)	191, 1490, 1586
Vha464I	CTTAAG	1 cut(s)	1798
VpaK11BI	GGWCC	3 cut(s)	1055, 1706, 2098
VspI	ATTAAT	2 cut(s)	1173, 1515
XapI	RAATTY	3 cut(s)	285, 728, 1996
XceI	RCATGY	1 cut(s)	107
XhoI	CTCGAG	2 cut(s)	1214, 1355
XspI	CTAG	6 cut(s)	93, 309, 471, 1509, 1821, 1850
ZrmI	AGTACT	1 cut(s)	1980
Zsp2I	ATGCAT	1 cut(s)	2141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.