Rh6AG397500

Solute carrier family 35 member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0002838
Physical Location & Seq
Forward (+)
59630412 .. 59633893
3482 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG397500.1

Sequence Viewer

Length: 1095 bp
ATGAAGGCTAGGATCGATGTTTGCTTATATTGCTATGATTTTCACAAGTTGTTCTCACTGCAGAGAATTTTCACAGAGTACAAACAGCCTTTTTCACTCACCTATCTCGGTGTGTCCCTCATGGTCGTCTATCTACCTATAGCAGCCCTCAAGGACTGGATCTGCAGCTTACTGAGAAAAAATGAATTTCATGACAGTGCAGAAACAGATGTCACAACTTCCTTAATTACTGATAAAGACCTCAGTGATAGAGAAGGAGGGCGCCCTGTAATGGATAAGAATGACGTAGATGAGCCTTACTTTCTTGCAAAAAGTAATCAACTTGGTCCATGGGAAATTGCAAAATTTGGCTTAATACTTACTCCAGCATGGTTTATCACAGAGTATTTGTCAAATTCTGCACTGGCAAATACTAGTGTTGCAAGTACAACTGTCCTAACTTCCACATCGGGGCTCTTTACACTTTTGTTTGGAGCACTTCTTCGTCAGGACTCCATAAACATTGCAAAGATGGTTGCTGTTTTTATCAGCATGGCTGGTGTTGCCATGACCACAGCTGGAAAAACTTGGGCACCTGATGAACTGCTGAGCGTCTCTGAGACTAGAAAGCACTCAATAACAGGAGACATTTTCGGTCTTGTGTCAGCAGCATCGTATGGATTATTCACAGTGTTACTCAAGAAATTTGCTGGATCAGAAGAGGAAGGGGAAAAAGCTGATGTGCAAAAGCTATTCGGATACATTGGTCTCTTCACTCTTCTTGGTCTGTGGTGGCTTGTGTTGCCGCTGAATGCTATGGGGATTGAACCGTCTTTTGAATATCCACCATCGGGATCTGTTGGGGAAGCTGTGCTGTTAAATGGCTTTGTGGGGAGTGTTCTTTCAGATTATTTTTGGGCTCTTTCTGTAGTTTGGACATCTCCGTTAGTTGCAACTTTGGGCATGTCCTTGACAATTCCCCTTGCTATGGTTGCTGACATGGTGATTCACGGCCGTCGTTACTCTGCAATCTACATCTCTGGTTGCATTCAGGTTTTTGCAGGATTTGTCATGGCAAACCTTTCAAACAAGTTTTCTAGCAAGGAAGAGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EamA

Protein Analysis

364

Amino Acids

40.0

Weight (kDa)

5.12

Isoelectric Point (pI)

31.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 105 - 185 1.3e-06 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 261, 571
AciI CCGC 1 cut(s) 785
AclWI GGATC 4 cut(s) 20, 167, 700, 841
AcoI YGGCCR 1 cut(s) 991
AcsI RAATTY 5 cut(s) 66, 185, 344, 394, 683
AcyI GRCGYC 1 cut(s) 262
AfaI GTAC 2 cut(s) 80, 427
AfiI CCNNNNNNNGG 4 cut(s) 271, 450, 830, 967
AgsI TTSAA 3 cut(s) 806, 818, 1065
AhlI ACTAGT 1 cut(s) 413
AluBI AGCT 5 cut(s) 168, 557, 716, 730, 848
AluI AGCT 5 cut(s) 168, 557, 716, 730, 848
Alw21I GWGCWC 1 cut(s) 478
Alw26I GTCTC 4 cut(s) 593, 598, 618, 752
AlwI GGATC 4 cut(s) 20, 167, 700, 841
AoxI GGCC 1 cut(s) 991
ApeKI GCWGC 3 cut(s) 143, 165, 647
ApoI RAATTY 5 cut(s) 66, 185, 344, 394, 683
AspLEI GCGC 1 cut(s) 264
AspS9I GGNCC 1 cut(s) 326
AsuHPI GGTGA 2 cut(s) 91, 994
AvaII GGWCC 1 cut(s) 326
BaeGI GKGCMC 1 cut(s) 574
BaeI ACNNNNGTAYC 2 cut(s) 730, 763
BanI GGYRCC 2 cut(s) 261, 571
BanII GRGCYC 2 cut(s) 456, 901
Bbv12I GWGCWC 1 cut(s) 478
BbvI GCAGC 3 cut(s) 155, 177, 659
BccI CCATC 2 cut(s) 505, 835
BceAI ACGGC 2 cut(s) 978, 1006
BciVI GTATCC 1 cut(s) 731
BcoDI GTCTC 4 cut(s) 593, 598, 618, 752
BcuI ACTAGT 1 cut(s) 413
BfaI CTAG 4 cut(s) 9, 414, 603, 1077
BfmI CTRYAG 4 cut(s) 59, 138, 163, 906
BfoI RGCGCY 1 cut(s) 265
BfuI GTATCC 1 cut(s) 731
BisI GCNGC 4 cut(s) 144, 166, 648, 785
BlpI GCTNAGC 1 cut(s) 587
BlsI GCNGC 4 cut(s) 145, 167, 649, 786
Bme18I GGWCC 1 cut(s) 326
BmgT120I GGNCC 1 cut(s) 326
BmiI GGNNCC 2 cut(s) 263, 573
BmsI GCATC 1 cut(s) 659
BpmI CTGGAG 1 cut(s) 348
Bpu1102I GCTNAGC 1 cut(s) 587
BpuEI CTTGAG 2 cut(s) 134, 662
Bsa29I ATCGAT 1 cut(s) 15
BsaHI GRCGYC 1 cut(s) 262
BsaI GGTCTC 1 cut(s) 752
BsaJI CCNNGG 1 cut(s) 329
Bsc4I CCNNNNNNNGG 4 cut(s) 271, 450, 830, 967
Bse1I ACTGG 2 cut(s) 161, 408
Bse3DI GCAATG 1 cut(s) 501
BseCI ATCGAT 1 cut(s) 15
BseDI CCNNGG 1 cut(s) 329
BseLI CCNNNNNNNGG 4 cut(s) 271, 450, 830, 967
BseMI GCAATG 1 cut(s) 501
BseMII CTCAG 4 cut(s) 164, 256, 578, 588
BseNI ACTGG 2 cut(s) 161, 408
BseSI GKGCMC 1 cut(s) 574
BseX3I CGGCCG 1 cut(s) 991
BseXI GCAGC 3 cut(s) 155, 177, 659
BsgI GTGCAG 2 cut(s) 219, 384
Bsh1285I CGRYCG 1 cut(s) 994
BshFI GGCC 1 cut(s) 993
BshNI GGYRCC 2 cut(s) 261, 571
BshVI ATCGAT 1 cut(s) 15
BsiEI CGRYCG 1 cut(s) 994
BsiHKAI GWGCWC 1 cut(s) 478
BslFI GGGAC 1 cut(s) 100
BslI CCNNNNNNNGG 4 cut(s) 271, 450, 830, 967
BsmAI GTCTC 4 cut(s) 593, 598, 618, 752
BsmBI CGTCTC 1 cut(s) 598
BsmFI GGGAC 1 cut(s) 100
BsmI GAATGC 2 cut(s) 796, 1026
BsnI GGCC 1 cut(s) 993
Bso31I GGTCTC 1 cut(s) 752
Bsp1286I GDGCHC 4 cut(s) 456, 478, 574, 901
Bsp143I GATC 4 cut(s) 12, 159, 692, 833
Bsp1720I GCTNAGC 1 cut(s) 587
Bsp19I CCATGG 1 cut(s) 329
BspACI CCGC 1 cut(s) 785
BspANI GGCC 1 cut(s) 993
BspCNI CTCAG 4 cut(s) 165, 255, 579, 589
BspDI ATCGAT 1 cut(s) 15
BspHI TCATGA 1 cut(s) 190
BspLI GGNNCC 2 cut(s) 263, 573
BspMAI CTGCAG 2 cut(s) 63, 167
BspPI GGATC 4 cut(s) 20, 167, 700, 841
BspT107I GGYRCC 2 cut(s) 261, 571
BspTNI GGTCTC 1 cut(s) 752
BsrDI GCAATG 1 cut(s) 501
BsrI ACTGG 2 cut(s) 161, 408
BssECI CCNNGG 1 cut(s) 329
BssMI GATC 4 cut(s) 12, 159, 692, 833
BssNI GRCGYC 1 cut(s) 262
BssT1I CCWWGG 1 cut(s) 329
Bst4CI ACNGT 4 cut(s) 197, 433, 670, 810
Bst6I CTCTTC 4 cut(s) 693, 755, 762, 1080
BstACI GRCGYC 1 cut(s) 262
BstDEI CTNAG 4 cut(s) 173, 242, 587, 597
BstDSI CCRYGG 1 cut(s) 329
BstH2I RGCGCY 1 cut(s) 265
BstHHI GCGC 1 cut(s) 264
BstKTI GATC 4 cut(s) 15, 162, 695, 836
BstMAI GTCTC 4 cut(s) 593, 598, 618, 752
BstMBI GATC 4 cut(s) 12, 159, 692, 833
BstMCI CGRYCG 1 cut(s) 994
BstMWI GCNNNNNNNGC 4 cut(s) 30, 542, 781, 971
BstNSI RCATGY 1 cut(s) 946
BstSFI CTRYAG 4 cut(s) 59, 138, 163, 906
BstSLI GKGCMC 1 cut(s) 574
BstV1I GCAGC 3 cut(s) 155, 177, 659
BstX2I RGATCY 2 cut(s) 159, 833
BstYI RGATCY 2 cut(s) 159, 833
BstZI CGGCCG 1 cut(s) 991
Bsu15I ATCGAT 1 cut(s) 15
BsuI GTATCC 1 cut(s) 731
BsuRI GGCC 1 cut(s) 993
BsuTUI ATCGAT 1 cut(s) 15
BtgI CCRYGG 1 cut(s) 329
BtsI GCAGTG 1 cut(s) 56
BtsIMutI CAGTG 5 cut(s) 56, 202, 250, 401, 675
CciI TCATGA 1 cut(s) 190
CfoI GCGC 1 cut(s) 264
Cfr13I GGNCC 1 cut(s) 326
ClaI ATCGAT 1 cut(s) 15
CseI GACGC 1 cut(s) 580
Csp6I GTAC 2 cut(s) 79, 426
CviAII CATG 9 cut(s) 121, 191, 330, 369, 532, 547, 943, 979, 1051
CviQI GTAC 2 cut(s) 79, 426
DdeI CTNAG 4 cut(s) 173, 242, 587, 597
DinI GGCGCC 1 cut(s) 263
DpnI GATC 4 cut(s) 14, 161, 694, 835
DpnII GATC 4 cut(s) 12, 159, 692, 833
EaeI YGGCCR 1 cut(s) 991
EagI CGGCCG 1 cut(s) 991
Eam1104I CTCTTC 4 cut(s) 693, 755, 762, 1080
EarI CTCTTC 4 cut(s) 693, 755, 762, 1080
EclXI CGGCCG 1 cut(s) 991
Eco130I CCWWGG 1 cut(s) 329
Eco24I GRGCYC 2 cut(s) 456, 901
Eco31I GGTCTC 1 cut(s) 752
Eco47I GGWCC 1 cut(s) 326
Eco52I CGGCCG 1 cut(s) 991
EcoT14I CCWWGG 1 cut(s) 329
EcoT38I GRGCYC 2 cut(s) 456, 901
EgeI GGCGCC 1 cut(s) 263
EheI GGCGCC 1 cut(s) 263
ErhI CCWWGG 1 cut(s) 329
Esp3I CGTCTC 1 cut(s) 598
FaeI CATG 9 cut(s) 124, 194, 333, 372, 535, 550, 946, 982, 1054
FaqI GGGAC 1 cut(s) 100
FatI CATG 9 cut(s) 120, 190, 329, 368, 531, 546, 942, 978, 1050
Fnu4HI GCNGC 4 cut(s) 144, 166, 648, 785
FriOI GRGCYC 2 cut(s) 456, 901
Fsp4HI GCNGC 4 cut(s) 144, 166, 648, 785
FspBI CTAG 4 cut(s) 9, 414, 603, 1077
GlaI GCGC 1 cut(s) 263
GluI GCNGC 4 cut(s) 144, 166, 648, 785
GsuI CTGGAG 1 cut(s) 348
HaeII RGCGCY 1 cut(s) 265
HaeIII GGCC 1 cut(s) 993
HgaI GACGC 1 cut(s) 580
HhaI GCGC 1 cut(s) 264
Hin1I GRCGYC 1 cut(s) 262
Hin1II CATG 9 cut(s) 124, 194, 333, 372, 535, 550, 946, 982, 1054
Hin6I GCGC 1 cut(s) 262
HinP1I GCGC 1 cut(s) 262
HinfI GANTC 2 cut(s) 491, 985
HphI GGTGA 2 cut(s) 91, 994
Hpy188I TCNGA 4 cut(s) 598, 697, 737, 886
Hpy188III TCNNGA 4 cut(s) 191, 488, 679, 831
Hpy99I CGWCG 1 cut(s) 999
HpyAV CCTTC 2 cut(s) 248, 698
HpyCH4III ACNGT 4 cut(s) 197, 433, 670, 810
HpyCH4IV ACGT 1 cut(s) 285
HpyF10VI GCNNNNNNNGC 4 cut(s) 30, 542, 781, 971
HpyF3I CTNAG 4 cut(s) 173, 242, 587, 597
HpySE526I ACGT 1 cut(s) 285
Hsp92I GRCGYC 1 cut(s) 262
Hsp92II CATG 9 cut(s) 124, 194, 333, 372, 535, 550, 946, 982, 1054
HspAI GCGC 1 cut(s) 262
KasI GGCGCC 1 cut(s) 261
Kzo9I GATC 4 cut(s) 12, 159, 692, 833
LmnI GCTCC 1 cut(s) 473
Lsp1109I GCAGC 3 cut(s) 155, 177, 659
LweI GCATC 1 cut(s) 659
MaeI CTAG 4 cut(s) 9, 414, 603, 1077
MaeII ACGT 1 cut(s) 285
MaeIII GTNAC 3 cut(s) 211, 672, 998
MalI GATC 4 cut(s) 14, 161, 694, 835
MboI GATC 4 cut(s) 12, 159, 692, 833
MboII GAAGA 4 cut(s) 473, 710, 742, 749
MflI RGATCY 2 cut(s) 159, 833
MhlI GDGCHC 4 cut(s) 456, 478, 574, 901
MluCI AATT 8 cut(s) 66, 185, 225, 336, 344, 394, 683, 954
Mly113I GGCGCC 1 cut(s) 262
MlyI GAGTC 1 cut(s) 485
MnlI CCTC 5 cut(s) 128, 158, 251, 251, 694
MseI TTAA 3 cut(s) 224, 353, 857
MslI CAYNNNNRTG 1 cut(s) 195
MspA1I CMGCKG 2 cut(s) 557, 787
Mva1269I GAATGC 2 cut(s) 796, 1026
MwoI GCNNNNNNNGC 4 cut(s) 30, 542, 781, 971
NarI GGCGCC 1 cut(s) 262
NcoI CCATGG 1 cut(s) 329
NdeII GATC 4 cut(s) 12, 159, 692, 833
NlaIII CATG 9 cut(s) 124, 194, 333, 372, 535, 550, 946, 982, 1054
NlaIV GGNNCC 2 cut(s) 263, 573
NmuCI GTSAC 1 cut(s) 211
NspI RCATGY 1 cut(s) 946
PagI TCATGA 1 cut(s) 190
PctI GAATGC 2 cut(s) 796, 1026
PfeI GAWTC 1 cut(s) 985
PkrI GCNGC 4 cut(s) 145, 167, 649, 786
PleI GAGTC 1 cut(s) 485
PluTI GGCGCC 1 cut(s) 265
PpsI GAGTC 1 cut(s) 485
PspN4I GGNNCC 2 cut(s) 263, 573
PspPI GGNCC 1 cut(s) 326
PstI CTGCAG 2 cut(s) 63, 167
PsuI RGATCY 2 cut(s) 159, 833
PvuII CAGCTG 1 cut(s) 557
RsaI GTAC 2 cut(s) 80, 427
RsaNI GTAC 2 cut(s) 79, 426
RseI CAYNNNNRTG 1 cut(s) 195
SaqAI TTAA 3 cut(s) 224, 353, 857
SatI GCNGC 4 cut(s) 144, 166, 648, 785
Sau3AI GATC 4 cut(s) 12, 159, 692, 833
Sau96I GGNCC 1 cut(s) 326
SchI GAGTC 1 cut(s) 485
SduI GDGCHC 4 cut(s) 456, 478, 574, 901
SfaNI GCATC 1 cut(s) 659
SfcI CTRYAG 4 cut(s) 59, 138, 163, 906
SfoI GGCGCC 1 cut(s) 263
SinI GGWCC 1 cut(s) 326
SmiMI CAYNNNNRTG 1 cut(s) 195
SmlI CTYRAG 2 cut(s) 149, 677
SmoI CTYRAG 2 cut(s) 149, 677
SpeI ACTAGT 1 cut(s) 413
Sse9I AATT 8 cut(s) 66, 185, 225, 336, 344, 394, 683, 954
SsiI CCGC 1 cut(s) 785
SspDI GGCGCC 1 cut(s) 261
SspMI CTAG 4 cut(s) 9, 414, 603, 1077
StyI CCWWGG 1 cut(s) 329
TaaI ACNGT 4 cut(s) 197, 433, 670, 810
TaiI ACGT 1 cut(s) 288
TaqI TCGA 1 cut(s) 15
TaqII GACCGA 1 cut(s) 623
TasI AATT 8 cut(s) 66, 185, 225, 336, 344, 394, 683, 954
TatI WGTACW 2 cut(s) 78, 425
TauI GCSGC 1 cut(s) 787
TfiI GAWTC 1 cut(s) 985
Tru1I TTAA 3 cut(s) 224, 353, 857
Tru9I TTAA 3 cut(s) 224, 353, 857
TscAI CASTG 5 cut(s) 63, 202, 250, 408, 675
TseFI GTSAC 1 cut(s) 211
TseI GCWGC 3 cut(s) 143, 165, 647
Tsp45I GTSAC 1 cut(s) 211
TspDTI ATGAA 4 cut(s) 17, 179, 198, 594
TspGWI ACGGA 1 cut(s) 912
TspRI CASTG 5 cut(s) 63, 202, 250, 408, 675
VpaK11BI GGWCC 1 cut(s) 326
XapI RAATTY 5 cut(s) 66, 185, 344, 394, 683
XceI RCATGY 1 cut(s) 946
XspI CTAG 4 cut(s) 9, 414, 603, 1077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.