Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003068

Physical Location & Seq

Genomic Coordinates Forward (+)

53567326 .. 53570415

Gene Structure 3090 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0391000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1203 bp

ATGGGGCGGAGAGATGTTCAGGTTTTCGATGACAGGAGCGATGGATTCTTCTCCGTTTGCAATTTGGGGTTTCAATCGAGTCCCCAACAGGTGCAGTATCCCCACGCCGGAGGCTTATTTGCCAGCGTTTCCCAAGTCGGAATGGGGTTCGGAGTCTCGCCGACGCCGGACCCACAAAACCCGCGCGGGGACGGCGGCGGCATGAAGCTGCCGTACGCCGACCTGTACATGAAGTATGTGGAGGGCATTAAGAATTTTGGGGCCAAGGAGGAGGAGGAGATAGTAGAAGGGGAAGGGGTGGTGAAGAAGAAGAAGAAGGGTGGTTTGAAGTTGAAGATTAAGATTGCTAATCCTTCTCTGAGGAGGTTGATTAGTGGTGCGGTGGCCGGAGCGGTGTCGAGGACGGCGGTGGCGCCGTTGGAGACTATAAGGACGCATTTGATGGTTGGGAGTAGTGGGAATTCCACTACTGAGGTGTTTACTGATATTATGAAGGTGGATGGGTGGACGGGATTGTTTAGGGGGAATTTGGTCAATGTGATTCGGGTTGCGCCGAGCAAGGCAATAGAGCTGTTTGCTTATGATACAGTTAATAAGCACCTGTCGCCCAAAGCTGGAGAACAGTCGAAACTTCCAATTCCTGCCTCATTAGTTGCAGGTGCCTGTGCTGGAGTGAGCTCCACACTTATCACATACCCCCTTGAGTTACTAAAAACTCGGCTAACCATTCAGAGGGGCGTATATAATGGCCTTCTTGATGCATTTGTAAAAATTATTCGAGAAGAGGGACCTGCAGAGCTCTATAGAGGTCTTGCACCCAGTCTTATTGGAGTCATTCCTTATGCTGCCACAAATTACTGTGCTTATGACACATTACGGAAAGCCTATCGTAAGATTTTCAAGCAGGAGAAGATTGGGAACATTCAGACCCTTTTAATTGGATCAGCAGCTGGTGCTATTTCAAGTACCGCAACTTTCCCTCTTGAAGTAGCTCGCAAACATATGCAGGTGGGGGCCGTGGGTGGAAGGCAGTATAATGATGTGATTCATGCCCTCGCAAGCATACTTGAACATGAAGGTATTGCTGGTTTATACAGAGGGCTCGGGCCTAGCTGCATGAAGTTGGTGCCTGCAGCAGGGATTTCTTTCATGTGCTACGAAGCAATGAAGAAGATACTGGTAGAGGATGATGAGGAAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006355 GO:0006357 GO:0006725 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009611 GO:0009628 GO:0009651 GO:0009698 GO:0009699 GO:0009719 GO:0009725 GO:0009737 GO:0009751 GO:0009800 GO:0009803 GO:0009889 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0014070 GO:0016053 GO:0019219 GO:0019222 GO:0019438 GO:0019748 GO:0019752 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0032787 GO:0033993 GO:0042221 GO:0042493 GO:0042537 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043565 GO:0044212 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0044550 GO:0046394 GO:0046677 GO:0048519 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0072330 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

400

Amino Acids

42.95

Weight (kDa)

9.06

Isoelectric Point (pI)

36.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	118 - 202	2.3e-21	Mitochondrial carrier protein
Mito_carr	PF00153	210 - 298	1.1e-24	Mitochondrial carrier protein
Mito_carr	PF00153	306 - 395	2.1e-24	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003068)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g32950
rosa_chinensis	RchiOBHm_Chr2g0142471 RchiOBHm_Chr2g0142501 RchiOBHm_Chr5g0039751 RchiOBHm_Chr6g0311841 RchiOBHm_Chr6g0311851
rosa_laevigata	RLG00000019960 RLG00000033940
rosa_multiflora	Rmu_sc0000103.1_g000015 Rmu_sc0001211.1_g000005 Rmu_sc0002888.1_g000048 Rmu_sc0002888.1_g000051 Rmu_sc0007525.1_g000001 Rmu_sc0007525.1_g000007
rosa_roxburghii	Rroxscaffold_1G00041480 Rroxscaffold_7G00157270 Rroxscaffold_7G00157280
rosa_rugosa	Rorug02G0373000 Rorug05G0182000 Rorug06G0133900 Rorug06G0391000 Rorug06G0391200
rosa_samantha	Rh2BG434300 Rh2BG434500 Rh2CG411200 Rh2DG444300 Rh2DG444500 Rh5AG268400 Rh5CG305200 Rh6AG507300 Rh6AG507400 Rh6BG518300 Rh6BG518600
rosa_wichuraiana	Rw2G034780 Rw2G034830 Rw5G025080 Rw6G044140 Rw6G044150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	647, 997
Acc36I	ACCTGC	3 cut(s)	647, 799, 997
AccB1I	GGYRCC	3 cut(s)	412, 659, 1126
AccBSI	CCGCTC	1 cut(s)	392
AccII	CGCG	2 cut(s)	184, 186
AciI	CCGC	9 cut(s)	7, 182, 186, 195, 198, 380, 392, 407, 969
AclWI	GGATC	1 cut(s)	949
AcoI	YGGCCR	1 cut(s)	384
AcsI	RAATTY	3 cut(s)	253, 460, 526
AcyI	GRCGYC	2 cut(s)	164, 413
AfaI	GTAC	3 cut(s)	215, 227, 967
AfiI	CCNNNNNNNGG	5 cut(s)	107, 187, 614, 732, 1136
AgsI	TTSAA	7 cut(s)	74, 328, 334, 901, 963, 986, 1070
AluBI	AGCT	8 cut(s)	208, 571, 614, 678, 799, 950, 992, 1113
AluI	AGCT	8 cut(s)	208, 571, 614, 678, 799, 950, 992, 1113
Alw21I	GWGCWC	2 cut(s)	680, 801
Alw26I	GTCTC	2 cut(s)	160, 416
AlwI	GGATC	1 cut(s)	949
AlwNI	CAGNNNCTG	1 cut(s)	950
Ama87I	CYCGRG	1 cut(s)	1103
AoxI	GGCC	5 cut(s)	261, 384, 748, 1014, 1106
ApeKI	GCWGC	5 cut(s)	208, 845, 947, 1113, 1133
ApoI	RAATTY	3 cut(s)	253, 460, 526
AspLEI	GCGC	3 cut(s)	186, 415, 553
AspS9I	GGNCC	5 cut(s)	169, 261, 788, 1014, 1106
AsuHPI	GGTGA	1 cut(s)	313
AvaI	CYCGRG	1 cut(s)	1103
AvaII	GGWCC	2 cut(s)	169, 788
BanI	GGYRCC	3 cut(s)	412, 659, 1126
BanII	GRGCYC	3 cut(s)	680, 801, 1104
BarI	GAAGNNNNNNTAC	2 cut(s)	197, 229
Bbv12I	GWGCWC	2 cut(s)	680, 801
BbvI	GCAGC	5 cut(s)	195, 832, 959, 1100, 1145
BccI	CCATC	3 cut(s)	35, 436, 494
BceAI	ACGGC	5 cut(s)	196, 208, 400, 420, 1001
BciVI	GTATCC	1 cut(s)	108
BcoDI	GTCTC	2 cut(s)	160, 416
BfaI	CTAG	1 cut(s)	1110
BfmI	CTRYAG	3 cut(s)	792, 802, 1131
BfoI	RGCGCY	1 cut(s)	416
BfuAI	ACCTGC	3 cut(s)	647, 799, 997
BfuI	GTATCC	1 cut(s)	108
BisI	GCNGC	7 cut(s)	196, 199, 209, 846, 948, 1114, 1134
BlsI	GCNGC	7 cut(s)	197, 200, 210, 847, 949, 1115, 1135
Bme18I	GGWCC	2 cut(s)	169, 788
BmeT110I	CYCGRG	1 cut(s)	1103
BmgT120I	GGNCC	5 cut(s)	169, 261, 788, 1014, 1106
BmiI	GGNNCC	7 cut(s)	171, 262, 414, 661, 789, 1015, 1128
BmrI	ACTGGG	1 cut(s)	813
BmsI	GCATC	1 cut(s)	748
BmuI	ACTGGG	1 cut(s)	813
BpmI	CTGGAG	2 cut(s)	636, 690
BpuEI	CTTGAG	1 cut(s)	722
BsaHI	GRCGYC	2 cut(s)	164, 413
BsaJI	CCNNGG	2 cut(s)	264, 1017
Bsc4I	CCNNNNNNNGG	5 cut(s)	107, 187, 614, 732, 1136
Bse1I	ACTGG	2 cut(s)	819, 1182
Bse3DI	GCAATG	1 cut(s)	1170
BseDI	CCNNGG	2 cut(s)	264, 1017
BseGI	GGATG	2 cut(s)	505, 1192
BseLI	CCNNNNNNNGG	5 cut(s)	107, 187, 614, 732, 1136
BseMI	GCAATG	1 cut(s)	1170
BseMII	CTCAG	2 cut(s)	350, 462
BseNI	ACTGG	2 cut(s)	819, 1182
BseRI	GAGGAG	4 cut(s)	284, 287, 290, 376
BseXI	GCAGC	5 cut(s)	195, 832, 959, 1100, 1145
BsgI	GTGCAG	1 cut(s)	113
Bsh1236I	CGCG	2 cut(s)	184, 186
BshFI	GGCC	5 cut(s)	263, 386, 750, 1016, 1108
BshNI	GGYRCC	3 cut(s)	412, 659, 1126
BsiHKAI	GWGCWC	2 cut(s)	680, 801
BsiHKCI	CYCGRG	1 cut(s)	1103
BsiSI	CCGG	3 cut(s)	108, 167, 387
BsiWI	CGTACG	1 cut(s)	213
BslFI	GGGAC	3 cut(s)	66, 203, 801
BslI	CCNNNNNNNGG	5 cut(s)	107, 187, 614, 732, 1136
BsmAI	GTCTC	2 cut(s)	160, 416
BsmFI	GGGAC	3 cut(s)	66, 203, 801
BsnI	GGCC	5 cut(s)	263, 386, 750, 1016, 1108
BsoBI	CYCGRG	1 cut(s)	1103
Bsp1286I	GDGCHC	3 cut(s)	680, 801, 1104
Bsp1407I	TGTACA	1 cut(s)	225
Bsp143I	GATC	1 cut(s)	941
BspACI	CCGC	9 cut(s)	7, 182, 186, 195, 198, 380, 392, 407, 969
BspANI	GGCC	5 cut(s)	263, 386, 750, 1016, 1108
BspCNI	CTCAG	2 cut(s)	351, 463
BspFNI	CGCG	2 cut(s)	184, 186
BspLI	GGNNCC	7 cut(s)	171, 262, 414, 661, 789, 1015, 1128
BspMAI	CTGCAG	2 cut(s)	796, 1135
BspMI	ACCTGC	3 cut(s)	647, 799, 997
BspPI	GGATC	1 cut(s)	949
BspT107I	GGYRCC	3 cut(s)	412, 659, 1126
BsrBI	CCGCTC	1 cut(s)	392
BsrDI	GCAATG	1 cut(s)	1170
BsrGI	TGTACA	1 cut(s)	225
BsrI	ACTGG	2 cut(s)	819, 1182
BssECI	CCNNGG	2 cut(s)	264, 1017
BssMI	GATC	1 cut(s)	941
BssNI	GRCGYC	2 cut(s)	164, 413
BssT1I	CCWWGG	1 cut(s)	264
Bst4CI	ACNGT	3 cut(s)	589, 624, 860
Bst6I	CTCTTC	1 cut(s)	777
BstACI	GRCGYC	2 cut(s)	164, 413
BstAPI	GCANNNNNTGC	1 cut(s)	953
BstAUI	TGTACA	1 cut(s)	225
BstC8I	GCNNGC	4 cut(s)	124, 994, 1060, 1131
BstDEI	CTNAG	2 cut(s)	359, 471
BstDSI	CCRYGG	1 cut(s)	1017
BstENI	CCTNNNNNAGG	1 cut(s)	1134
BstF5I	GGATG	2 cut(s)	505, 1192
BstFNI	CGCG	2 cut(s)	184, 186
BstH2I	RGCGCY	1 cut(s)	416
BstHHI	GCGC	3 cut(s)	186, 415, 553
BstKTI	GATC	1 cut(s)	944
BstMAI	GTCTC	2 cut(s)	160, 416
BstMBI	GATC	1 cut(s)	941
BstMWI	GCNNNNNNNGC	3 cut(s)	192, 604, 953
BstSFI	CTRYAG	3 cut(s)	792, 802, 1131
BstUI	CGCG	2 cut(s)	184, 186
BstV1I	GCAGC	5 cut(s)	195, 832, 959, 1100, 1145
BsuI	GTATCC	1 cut(s)	108
BsuRI	GGCC	5 cut(s)	263, 386, 750, 1016, 1108
BtgI	CCRYGG	1 cut(s)	1017
BtgZI	GCGATG	1 cut(s)	54
BtsCI	GGATG	2 cut(s)	505, 1192
BveI	ACCTGC	3 cut(s)	647, 799, 997
Cac8I	GCNNGC	4 cut(s)	124, 994, 1060, 1131
CaiI	CAGNNNCTG	1 cut(s)	950
CfoI	GCGC	3 cut(s)	186, 415, 553
Cfr13I	GGNCC	5 cut(s)	169, 261, 788, 1014, 1106
CseI	GACGC	2 cut(s)	172, 442
Csp6I	GTAC	3 cut(s)	214, 226, 966
CviAII	CATG	6 cut(s)	202, 229, 1049, 1073, 1117, 1150
CviQI	GTAC	3 cut(s)	214, 226, 966
DdeI	CTNAG	2 cut(s)	359, 471
DinI	GGCGCC	1 cut(s)	414
DpnI	GATC	1 cut(s)	943
DpnII	GATC	1 cut(s)	941
EaeI	YGGCCR	1 cut(s)	384
Eam1104I	CTCTTC	1 cut(s)	777
EarI	CTCTTC	1 cut(s)	777
EciI	GGCGGA	1 cut(s)	22
Ecl136II	GAGCTC	2 cut(s)	678, 799
Eco130I	CCWWGG	1 cut(s)	264
Eco24I	GRGCYC	3 cut(s)	680, 801, 1104
Eco47I	GGWCC	2 cut(s)	169, 788
Eco53kI	GAGCTC	2 cut(s)	678, 799
Eco88I	CYCGRG	1 cut(s)	1103
EcoICRI	GAGCTC	2 cut(s)	678, 799
EcoNI	CCTNNNNNAGG	1 cut(s)	1134
EcoO109I	RGGNCCY	1 cut(s)	788
EcoRI	GAATTC	1 cut(s)	460
EcoT14I	CCWWGG	1 cut(s)	264
EcoT22I	ATGCAT	1 cut(s)	763
EcoT38I	GRGCYC	3 cut(s)	680, 801, 1104
EgeI	GGCGCC	1 cut(s)	414
EheI	GGCGCC	1 cut(s)	414
ErhI	CCWWGG	1 cut(s)	264
FaeI	CATG	6 cut(s)	205, 232, 1052, 1076, 1120, 1153
FaqI	GGGAC	3 cut(s)	66, 203, 801
FatI	CATG	6 cut(s)	201, 228, 1048, 1072, 1116, 1149
FauI	CCCGC	2 cut(s)	179, 189
FauNDI	CATATG	1 cut(s)	1002
Fnu4HI	GCNGC	7 cut(s)	196, 199, 209, 846, 948, 1114, 1134
FokI	GGATG	2 cut(s)	512, 1199
FriOI	GRGCYC	3 cut(s)	680, 801, 1104
Fsp4HI	GCNGC	7 cut(s)	196, 199, 209, 846, 948, 1114, 1134
FspBI	CTAG	1 cut(s)	1110
GlaI	GCGC	3 cut(s)	185, 414, 552
GluI	GCNGC	7 cut(s)	196, 199, 209, 846, 948, 1114, 1134
GsuI	CTGGAG	2 cut(s)	636, 690
HaeII	RGCGCY	1 cut(s)	416
HaeIII	GGCC	5 cut(s)	263, 386, 750, 1016, 1108
HapII	CCGG	3 cut(s)	108, 167, 387
HgaI	GACGC	2 cut(s)	172, 442
HhaI	GCGC	3 cut(s)	186, 415, 553
Hin1I	GRCGYC	2 cut(s)	164, 413
Hin1II	CATG	6 cut(s)	205, 232, 1052, 1076, 1120, 1153
Hin6I	GCGC	3 cut(s)	184, 413, 551
HinP1I	GCGC	3 cut(s)	184, 413, 551
HinfI	GANTC	6 cut(s)	45, 79, 153, 541, 831, 1045
HpaII	CCGG	3 cut(s)	108, 167, 387
HphI	GGTGA	1 cut(s)	313
Hpy166II	GTNNAC	2 cut(s)	480, 507
Hpy188I	TCNGA	5 cut(s)	140, 152, 360, 732, 927
Hpy188III	TCNNGA	3 cut(s)	755, 779, 983
Hpy8I	GTNNAC	2 cut(s)	480, 507
Hpy99I	CGWCG	1 cut(s)	166
HpyAV	CCTTC	8 cut(s)	281, 287, 310, 363, 487, 761, 1020, 1070
HpyCH4III	ACNGT	3 cut(s)	589, 624, 860
HpyCH4V	TGCA	9 cut(s)	60, 94, 656, 761, 794, 815, 1006, 1116, 1133
HpyF10VI	GCNNNNNNNGC	3 cut(s)	192, 604, 953
HpyF3I	CTNAG	2 cut(s)	359, 471
Hsp92I	GRCGYC	2 cut(s)	164, 413
Hsp92II	CATG	6 cut(s)	205, 232, 1052, 1076, 1120, 1153
HspAI	GCGC	3 cut(s)	184, 413, 551
KasI	GGCGCC	1 cut(s)	412
Kzo9I	GATC	1 cut(s)	941
LmnI	GCTCC	3 cut(s)	36, 389, 683
Lsp1109I	GCAGC	5 cut(s)	195, 832, 959, 1100, 1145
LweI	GCATC	1 cut(s)	748
MaeI	CTAG	1 cut(s)	1110
MaeIII	GTNAC	1 cut(s)	705
MalI	GATC	1 cut(s)	943
MbiI	CCGCTC	1 cut(s)	392
MboI	GATC	1 cut(s)	941
MhlI	GDGCHC	3 cut(s)	680, 801, 1104
MluCI	AATT	8 cut(s)	61, 253, 460, 526, 636, 771, 853, 936
Mly113I	GGCGCC	1 cut(s)	413
MlyI	GAGTC	3 cut(s)	88, 162, 840
MmeI	TCCRAC	2 cut(s)	118, 399
Mph1103I	ATGCAT	1 cut(s)	763
MseI	TTAA	4 cut(s)	249, 339, 591, 935
MspA1I	CMGCKG	1 cut(s)	950
MspI	CCGG	3 cut(s)	108, 167, 387
MvnI	CGCG	2 cut(s)	184, 186
MwoI	GCNNNNNNNGC	3 cut(s)	192, 604, 953
NarI	GGCGCC	1 cut(s)	413
NdeI	CATATG	1 cut(s)	1002
NdeII	GATC	1 cut(s)	941
NlaIII	CATG	6 cut(s)	205, 232, 1052, 1076, 1120, 1153
NlaIV	GGNNCC	7 cut(s)	171, 262, 414, 661, 789, 1015, 1128
NmeAIII	GCCGAG	2 cut(s)	579, 697
NsiI	ATGCAT	1 cut(s)	763
PaqCI	CACCTGC	2 cut(s)	647, 997
PfeI	GAWTC	3 cut(s)	45, 541, 1045
Pfl23II	CGTACG	1 cut(s)	213
PkrI	GCNGC	7 cut(s)	197, 200, 210, 847, 949, 1115, 1135
PleI	GAGTC	3 cut(s)	87, 161, 839
PluTI	GGCGCC	1 cut(s)	416
PpsI	GAGTC	3 cut(s)	87, 161, 839
PpuMI	RGGWCCY	1 cut(s)	788
Psp124BI	GAGCTC	2 cut(s)	680, 801
Psp5II	RGGWCCY	1 cut(s)	788
PspLI	CGTACG	1 cut(s)	213
PspN4I	GGNNCC	7 cut(s)	171, 262, 414, 661, 789, 1015, 1128
PspPI	GGNCC	5 cut(s)	169, 261, 788, 1014, 1106
PspPPI	RGGWCCY	1 cut(s)	788
PstI	CTGCAG	2 cut(s)	796, 1135
PstNI	CAGNNNCTG	1 cut(s)	950
PvuII	CAGCTG	1 cut(s)	950
RsaI	GTAC	3 cut(s)	215, 227, 967
RsaNI	GTAC	3 cut(s)	214, 226, 966
SacI	GAGCTC	2 cut(s)	680, 801
SaqAI	TTAA	4 cut(s)	249, 339, 591, 935
SatI	GCNGC	7 cut(s)	196, 199, 209, 846, 948, 1114, 1134
Sau3AI	GATC	1 cut(s)	941
Sau96I	GGNCC	5 cut(s)	169, 261, 788, 1014, 1106
SchI	GAGTC	3 cut(s)	88, 162, 840
SduI	GDGCHC	3 cut(s)	680, 801, 1104
SfaNI	GCATC	1 cut(s)	748
SfcI	CTRYAG	3 cut(s)	792, 802, 1131
SfoI	GGCGCC	1 cut(s)	414
SinI	GGWCC	2 cut(s)	169, 788
SmlI	CTYRAG	1 cut(s)	701
SmoI	CTYRAG	1 cut(s)	701
Sse9I	AATT	8 cut(s)	61, 253, 460, 526, 636, 771, 853, 936
SsiI	CCGC	9 cut(s)	7, 182, 186, 195, 198, 380, 392, 407, 969
SspDI	GGCGCC	1 cut(s)	412
SspMI	CTAG	1 cut(s)	1110
SstI	GAGCTC	2 cut(s)	680, 801
StyI	CCWWGG	1 cut(s)	264
TaaI	ACNGT	3 cut(s)	589, 624, 860
TaqI	TCGA	5 cut(s)	27, 77, 398, 626, 778
TasI	AATT	8 cut(s)	61, 253, 460, 526, 636, 771, 853, 936
TatI	WGTACW	1 cut(s)	225
TauI	GCSGC	2 cut(s)	198, 201
TfiI	GAWTC	3 cut(s)	45, 541, 1045
Tru1I	TTAA	4 cut(s)	249, 339, 591, 935
Tru9I	TTAA	4 cut(s)	249, 339, 591, 935
TseI	GCWGC	5 cut(s)	208, 845, 947, 1113, 1133
TspDTI	ATGAA	8 cut(s)	218, 245, 506, 1037, 1089, 1133, 1138, 1181
TspGWI	ACGGA	2 cut(s)	43, 892
VpaK11BI	GGWCC	2 cut(s)	169, 788
XagI	CCTNNNNNAGG	1 cut(s)	1134
XapI	RAATTY	3 cut(s)	253, 460, 526
XspI	CTAG	1 cut(s)	1110
Zsp2I	ATGCAT	1 cut(s)	763

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.