Rh1CG423200

Catalyzes the phosphorylation of pantothenate the first step in CoA biosynthesis. May play a role in the physiological regulation of the intracellular CoA concentration

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0004879
Physical Location & Seq
Forward (+)
68259348 .. 68265663
6316 bp
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UTR
Exon/CDS
Intron
Rh1CG423200.1

Sequence Viewer

Length: 552 bp
ATGGCTCCGGTCACCGGAAGTTCGATTCACCGGTCGGGCTCTCGGCCTCAGTTGGACCTCAGCAAAGCTGCTATTCAGGGAACTTTTGAAGAGAGGGACCCTACAATTCTGTTGCCTAATCAGTCTGATCACTTGTCTCATCTGGCTTTGGACATTGGAAGATCTCTCATCAAGTTGGTGTATTTTTCTAGACACGAAGACCAATCAATTGATGACAAAAGGAAGAAAACTTTGAAGGAGAGACTGGGTATTTCCAATGGTAGTCGAAGAAGCTACCCTGTTCTTGGTGGAAGGCTTCATTTTGTGAAGTTTGAGACGACCAAGATTAATGAGTGCTTAGACTTCATTTATTCTAAACAACTTCACCGTGGAGGGATGGATGTTCGTATTTGGAATCCTGAAGCCCCAACCAATGAAAATGCTGTAATTAAGGGTTCCCCAAAGGCTGCAGCCTTTGAGCGTAAGAGTAATGGCGAATTACGTATGATTAATGATTCAACTTCCGAGGAATGCTTGAAGCCCAAATTTAAGTGGCCCAATCCCGGCGCTTGA

Protein Analysis

183

Amino Acids

20.58

Weight (kDa)

9.51

Isoelectric Point (pI)

51.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fumble PF03630 47 - 125 6e-13 Fumble
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 524
AcuI CTGAAG 1 cut(s) 420
AfiI CCNNNNNNNGG 3 cut(s) 14, 284, 542
AgeI ACCGGT 1 cut(s) 30
AgsI TTSAA 4 cut(s) 89, 235, 498, 517
AluBI AGCT 2 cut(s) 68, 273
AluI AGCT 2 cut(s) 68, 273
Alw26I GTCTC 3 cut(s) 141, 235, 308
AoxI GGCC 2 cut(s) 44, 533
ApeKI GCWGC 3 cut(s) 68, 446, 449
ApoI RAATTY 1 cut(s) 524
AseI ATTAAT 2 cut(s) 327, 489
AsiGI ACCGGT 1 cut(s) 30
AspLEI GCGC 1 cut(s) 548
AspS9I GGNCC 3 cut(s) 55, 97, 534
AsuC2I CCSGG 1 cut(s) 543
AsuHPI GGTGA 3 cut(s) 4, 20, 356
AvaII GGWCC 2 cut(s) 55, 97
BanII GRGCYC 1 cut(s) 41
BbsI GAAGAC 1 cut(s) 204
BbvCI CCTCAGC 1 cut(s) 59
BbvI GCAGC 3 cut(s) 55, 433, 461
BccI CCATC 1 cut(s) 370
BclI TGATCA 1 cut(s) 127
BcnI CCSGG 1 cut(s) 543
BcoDI GTCTC 3 cut(s) 141, 235, 308
BfaI CTAG 1 cut(s) 189
BfmI CTRYAG 1 cut(s) 447
BfoI RGCGCY 1 cut(s) 549
BglII AGATCT 1 cut(s) 161
BisI GCNGC 3 cut(s) 69, 447, 450
BlsI GCNGC 3 cut(s) 70, 448, 451
Bme1390I CCNGG 1 cut(s) 543
Bme18I GGWCC 2 cut(s) 55, 97
BmgT120I GGNCC 3 cut(s) 55, 97, 534
BmiI GGNNCC 4 cut(s) 6, 98, 99, 436
BmrFI CCNGG 1 cut(s) 543
BmrI ACTGGG 1 cut(s) 254
BmuI ACTGGG 1 cut(s) 254
BpiI GAAGAC 1 cut(s) 204
Bpu10I CCTNAGC 1 cut(s) 59
BpuMI CCSGG 1 cut(s) 543
BsaAI YACGTR 1 cut(s) 482
BsaJI CCNNGG 2 cut(s) 367, 504
BsaWI WCCGGW 3 cut(s) 7, 14, 30
Bsc4I CCNNNNNNNGG 3 cut(s) 14, 284, 542
Bse118I RCCGGY 1 cut(s) 30
Bse1I ACTGG 1 cut(s) 249
BseDI CCNNGG 2 cut(s) 367, 504
BseGI GGATG 2 cut(s) 381, 385
BseLI CCNNNNNNNGG 3 cut(s) 14, 284, 542
BseMII CTCAG 2 cut(s) 62, 73
BseNI ACTGG 1 cut(s) 249
BseXI GCAGC 3 cut(s) 55, 433, 461
Bsh1285I CGRYCG 1 cut(s) 35
BshFI GGCC 2 cut(s) 46, 535
BshTI ACCGGT 1 cut(s) 30
BsiEI CGRYCG 1 cut(s) 35
BsiSI CCGG 4 cut(s) 8, 15, 31, 543
BslFI GGGAC 1 cut(s) 110
BslI CCNNNNNNNGG 3 cut(s) 14, 284, 542
BsmAI GTCTC 3 cut(s) 141, 235, 308
BsmBI CGTCTC 1 cut(s) 308
BsmFI GGGAC 1 cut(s) 110
BsmI GAATGC 1 cut(s) 515
BsnI GGCC 2 cut(s) 46, 535
Bsp1286I GDGCHC 1 cut(s) 41
Bsp143I GATC 2 cut(s) 127, 161
BspANI GGCC 2 cut(s) 46, 535
BspCNI CTCAG 2 cut(s) 61, 72
BspLI GGNNCC 4 cut(s) 6, 98, 99, 436
BspMAI CTGCAG 1 cut(s) 451
BsrFI RCCGGY 1 cut(s) 30
BsrI ACTGG 1 cut(s) 249
BssAI RCCGGY 1 cut(s) 30
BssECI CCNNGG 2 cut(s) 367, 504
BssMI GATC 2 cut(s) 127, 161
Bst4CI ACNGT 1 cut(s) 368
Bst6I CTCTTC 1 cut(s) 84
BstBAI YACGTR 1 cut(s) 482
BstDEI CTNAG 3 cut(s) 48, 59, 337
BstDSI CCRYGG 1 cut(s) 367
BstEII GGTNACC 1 cut(s) 10
BstF5I GGATG 2 cut(s) 381, 385
BstH2I RGCGCY 1 cut(s) 549
BstHHI GCGC 1 cut(s) 548
BstKTI GATC 2 cut(s) 130, 164
BstMAI GTCTC 3 cut(s) 141, 235, 308
BstMBI GATC 2 cut(s) 127, 161
BstMCI CGRYCG 1 cut(s) 35
BstPI GGTNACC 1 cut(s) 10
BstSCI CCNGG 1 cut(s) 541
BstSFI CTRYAG 1 cut(s) 447
BstSNI TACGTA 1 cut(s) 482
BstV1I GCAGC 3 cut(s) 55, 433, 461
BstV2I GAAGAC 1 cut(s) 204
BstX2I RGATCY 1 cut(s) 161
BstYI RGATCY 1 cut(s) 161
BsuRI GGCC 2 cut(s) 46, 535
BtgI CCRYGG 1 cut(s) 367
BtsCI GGATG 2 cut(s) 381, 385
CfoI GCGC 1 cut(s) 548
Cfr10I RCCGGY 1 cut(s) 30
Cfr13I GGNCC 3 cut(s) 55, 97, 534
CspAI ACCGGT 1 cut(s) 30
DdeI CTNAG 3 cut(s) 48, 59, 337
DpnI GATC 2 cut(s) 129, 163
DpnII GATC 2 cut(s) 127, 161
Eam1104I CTCTTC 1 cut(s) 84
EarI CTCTTC 1 cut(s) 84
Eco105I TACGTA 1 cut(s) 482
Eco24I GRGCYC 1 cut(s) 41
Eco47I GGWCC 2 cut(s) 55, 97
Eco57I CTGAAG 1 cut(s) 420
Eco91I GGTNACC 1 cut(s) 10
EcoO109I RGGNCCY 1 cut(s) 97
EcoO65I GGTNACC 1 cut(s) 10
EcoT38I GRGCYC 1 cut(s) 41
Esp3I CGTCTC 1 cut(s) 308
FaiI YATR 1 cut(s) 485
FaqI GGGAC 1 cut(s) 110
FbaI TGATCA 1 cut(s) 127
Fnu4HI GCNGC 3 cut(s) 69, 447, 450
FokI GGATG 2 cut(s) 388, 392
FriOI GRGCYC 1 cut(s) 41
Fsp4HI GCNGC 3 cut(s) 69, 447, 450
FspBI CTAG 1 cut(s) 189
GlaI GCGC 1 cut(s) 547
GluI GCNGC 3 cut(s) 69, 447, 450
HaeII RGCGCY 1 cut(s) 549
HaeIII GGCC 2 cut(s) 46, 535
HapII CCGG 4 cut(s) 8, 15, 31, 543
HhaI GCGC 1 cut(s) 548
Hin6I GCGC 1 cut(s) 546
HinP1I GCGC 1 cut(s) 546
HinfI GANTC 3 cut(s) 25, 394, 494
HpaII CCGG 4 cut(s) 8, 15, 31, 543
HphI GGTGA 3 cut(s) 4, 20, 356
Hpy188I TCNGA 2 cut(s) 127, 505
Hpy188III TCNNGA 2 cut(s) 189, 398
HpyAV CCTTC 2 cut(s) 229, 285
HpyCH4III ACNGT 1 cut(s) 368
HpyCH4IV ACGT 1 cut(s) 481
HpyCH4V TGCA 1 cut(s) 449
HpyF3I CTNAG 3 cut(s) 48, 59, 337
HpySE526I ACGT 1 cut(s) 481
HspAI GCGC 1 cut(s) 546
KflI GGGWCCC 1 cut(s) 97
Ksp22I TGATCA 1 cut(s) 127
Kzo9I GATC 2 cut(s) 127, 161
LmnI GCTCC 1 cut(s) 10
LpnPI CCDG 8 cut(s) 21, 28, 44, 62, 128, 230, 291, 411
Lsp1109I GCAGC 3 cut(s) 55, 433, 461
MaeI CTAG 1 cut(s) 189
MaeII ACGT 1 cut(s) 481
MaeIII GTNAC 1 cut(s) 10
MalI GATC 2 cut(s) 129, 163
MboI GATC 2 cut(s) 127, 161
MboII GAAGA 5 cut(s) 101, 171, 209, 235, 279
MfeI CAATTG 1 cut(s) 207
MflI RGATCY 1 cut(s) 161
MhlI GDGCHC 1 cut(s) 41
MluCI AATT 5 cut(s) 105, 207, 426, 476, 524
MmeI TCCRAC 1 cut(s) 33
MnlI CCTC 5 cut(s) 57, 68, 87, 365, 499
MseI TTAA 4 cut(s) 327, 429, 489, 528
MspI CCGG 4 cut(s) 8, 15, 31, 543
MspR9I CCNGG 1 cut(s) 543
MunI CAATTG 1 cut(s) 207
Mva1269I GAATGC 1 cut(s) 515
NciI CCSGG 1 cut(s) 543
NdeII GATC 2 cut(s) 127, 161
NlaIV GGNNCC 4 cut(s) 6, 98, 99, 436
NmeAIII GCCGAG 1 cut(s) 22
NmuCI GTSAC 1 cut(s) 10
PctI GAATGC 1 cut(s) 515
PfeI GAWTC 3 cut(s) 25, 394, 494
PinAI ACCGGT 1 cut(s) 30
PkrI GCNGC 3 cut(s) 70, 448, 451
Ppu21I YACGTR 1 cut(s) 482
PpuMI RGGWCCY 1 cut(s) 97
PshBI ATTAAT 2 cut(s) 327, 489
Psp5II RGGWCCY 1 cut(s) 97
PspEI GGTNACC 1 cut(s) 10
PspN4I GGNNCC 4 cut(s) 6, 98, 99, 436
PspPI GGNCC 3 cut(s) 55, 97, 534
PspPPI RGGWCCY 1 cut(s) 97
PstI CTGCAG 1 cut(s) 451
PsuI RGATCY 1 cut(s) 161
SaqAI TTAA 4 cut(s) 327, 429, 489, 528
SatI GCNGC 3 cut(s) 69, 447, 450
Sau3AI GATC 2 cut(s) 127, 161
Sau96I GGNCC 3 cut(s) 55, 97, 534
ScrFI CCNGG 1 cut(s) 543
SduI GDGCHC 1 cut(s) 41
SetI ASST 4 cut(s) 60, 70, 275, 484
SfcI CTRYAG 1 cut(s) 447
SinI GGWCC 2 cut(s) 55, 97
SnaBI TACGTA 1 cut(s) 482
Sse9I AATT 5 cut(s) 105, 207, 426, 476, 524
SspMI CTAG 1 cut(s) 189
StyD4I CCNGG 1 cut(s) 541
TaaI ACNGT 1 cut(s) 368
TaiI ACGT 1 cut(s) 484
TaqI TCGA 2 cut(s) 23, 265
TasI AATT 5 cut(s) 105, 207, 426, 476, 524
TfiI GAWTC 3 cut(s) 25, 394, 494
Tru1I TTAA 4 cut(s) 327, 429, 489, 528
Tru9I TTAA 4 cut(s) 327, 429, 489, 528
TseFI GTSAC 1 cut(s) 10
TseI GCWGC 3 cut(s) 68, 446, 449
Tsp45I GTSAC 1 cut(s) 10
TspDTI ATGAA 3 cut(s) 287, 334, 429
VpaK11BI GGWCC 2 cut(s) 55, 97
VspI ATTAAT 2 cut(s) 327, 489
XapI RAATTY 1 cut(s) 524
XbaI TCTAGA 1 cut(s) 188
XspI CTAG 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.