No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17070 AT5G17070 |
| fragaria_vesca | FvH4_7g33790 FvH4_7g33790 FvH4_7g33790 FvH4_7g33790 |
| malus_domestica | MD01G1234200.v1.1 MD07G1306400.v1.1 |
| prunus_persica | Prupe.2G324400_v2.0.a1 Prupe.2G324400_v2.0.a1 |
| pyrus_communis | pycom01g24270 pycom07g27940 |
| rosa_chinensis | RchiOBHm_Chr1g0383921 |
| rosa_laevigata | RLG00000026086 |
| rosa_multiflora | Rmu_co8486869.1_g000001 Rmu_sc0005139.1_g000027 |
| rosa_roxburghii | Rroxscaffold_4G00277150 |
| rosa_rugosa | Rorug01G0443000 |
| rosa_samantha | Rh1AG189200 Rh1AG469000 Rh1BG426700 Rh1CG439500 Rh1DG459500 Rh2AG256200 Rh2AG256300 Rh2AG293800 Rh2BG193800 Rh2CG261600 Rh2DG264600 Rh4DG441900 Rh5AG227200 Rh5AG268100 Rh5BG209000 Rh5BG286400 Rh6CG067100 Rh6DG064000 Rh7BG421000 |
| rosa_wichuraiana | Rw1G002380 Rw1G040340 Rw5G026480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 224 |
| Acc36I | ACCTGC | 1 cut(s) | 224 |
| AccB1I | GGYRCC | 1 cut(s) | 65 |
| AciI | CCGC | 2 cut(s) | 76, 119 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 75 |
| AluBI | AGCT | 1 cut(s) | 136 |
| AluI | AGCT | 1 cut(s) | 136 |
| Alw21I | GWGCWC | 1 cut(s) | 181 |
| Alw44I | GTGCAC | 1 cut(s) | 177 |
| ApaLI | GTGCAC | 1 cut(s) | 177 |
| ApeKI | GCWGC | 1 cut(s) | 129 |
| AsuHPI | GGTGA | 2 cut(s) | 115, 248 |
| BaeGI | GKGCMC | 2 cut(s) | 70, 181 |
| BanI | GGYRCC | 1 cut(s) | 65 |
| Bbv12I | GWGCWC | 1 cut(s) | 181 |
| BbvI | GCAGC | 1 cut(s) | 141 |
| BccI | CCATC | 5 cut(s) | 37, 75, 109, 119, 221 |
| BfuAI | ACCTGC | 1 cut(s) | 224 |
| BisI | GCNGC | 2 cut(s) | 77, 130 |
| BlsI | GCNGC | 2 cut(s) | 78, 131 |
| BmiI | GGNNCC | 1 cut(s) | 67 |
| BmsI | GCATC | 1 cut(s) | 133 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 43, 73 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 75 |
| Bse118I | RCCGGY | 1 cut(s) | 100 |
| BseGI | GGATG | 3 cut(s) | 48, 148, 232 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 75 |
| BseSI | GKGCMC | 2 cut(s) | 70, 181 |
| BseXI | GCAGC | 1 cut(s) | 141 |
| BshNI | GGYRCC | 1 cut(s) | 65 |
| BsiHKAI | GWGCWC | 1 cut(s) | 181 |
| BsiSI | CCGG | 1 cut(s) | 101 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 75 |
| Bsp1286I | GDGCHC | 2 cut(s) | 70, 181 |
| Bsp143I | GATC | 1 cut(s) | 166 |
| BspACI | CCGC | 2 cut(s) | 76, 119 |
| BspLI | GGNNCC | 1 cut(s) | 67 |
| BspMI | ACCTGC | 1 cut(s) | 224 |
| BspT107I | GGYRCC | 1 cut(s) | 65 |
| BsrFI | RCCGGY | 1 cut(s) | 100 |
| BssAI | RCCGGY | 1 cut(s) | 100 |
| BssMI | GATC | 1 cut(s) | 166 |
| BstC8I | GCNNGC | 3 cut(s) | 134, 160, 177 |
| BstF5I | GGATG | 3 cut(s) | 48, 148, 232 |
| BstKTI | GATC | 1 cut(s) | 169 |
| BstMBI | GATC | 1 cut(s) | 166 |
| BstSLI | GKGCMC | 2 cut(s) | 70, 181 |
| BstV1I | GCAGC | 1 cut(s) | 141 |
| BtgZI | GCGATG | 2 cut(s) | 94, 128 |
| BtsCI | GGATG | 3 cut(s) | 48, 148, 232 |
| BveI | ACCTGC | 1 cut(s) | 224 |
| Cac8I | GCNNGC | 3 cut(s) | 134, 160, 177 |
| Cfr10I | RCCGGY | 1 cut(s) | 100 |
| CviJI | RGCY | 3 cut(s) | 136, 162, 261 |
| CviKI_1 | RGCY | 3 cut(s) | 136, 162, 261 |
| DpnI | GATC | 1 cut(s) | 168 |
| DpnII | GATC | 1 cut(s) | 166 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 14, 46 |
| Fnu4HI | GCNGC | 2 cut(s) | 77, 130 |
| FokI | GGATG | 3 cut(s) | 55, 155, 239 |
| Fsp4HI | GCNGC | 2 cut(s) | 77, 130 |
| GluI | GCNGC | 2 cut(s) | 77, 130 |
| HapII | CCGG | 1 cut(s) | 101 |
| HinfI | GANTC | 2 cut(s) | 14, 200 |
| HpaII | CCGG | 1 cut(s) | 101 |
| HphI | GGTGA | 2 cut(s) | 115, 248 |
| Hpy166II | GTNNAC | 2 cut(s) | 28, 179 |
| Hpy8I | GTNNAC | 2 cut(s) | 28, 179 |
| HpyAV | CCTTC | 2 cut(s) | 16, 241 |
| HpyCH4V | TGCA | 2 cut(s) | 158, 179 |
| Kzo9I | GATC | 1 cut(s) | 166 |
| LmnI | GCTCC | 1 cut(s) | 230 |
| LpnPI | CCDG | 6 cut(s) | 42, 83, 114, 177, 189, 219 |
| Lsp1109I | GCAGC | 1 cut(s) | 141 |
| LweI | GCATC | 1 cut(s) | 133 |
| MaeIII | GTNAC | 1 cut(s) | 236 |
| MalI | GATC | 1 cut(s) | 168 |
| MboI | GATC | 1 cut(s) | 166 |
| MboII | GAAGA | 1 cut(s) | 220 |
| MhlI | GDGCHC | 2 cut(s) | 70, 181 |
| MluCI | AATT | 2 cut(s) | 189, 216 |
| MlyI | GAGTC | 1 cut(s) | 8 |
| MnlI | CCTC | 4 cut(s) | 4, 40, 103, 217 |
| MspI | CCGG | 1 cut(s) | 101 |
| NdeII | GATC | 1 cut(s) | 166 |
| NlaIV | GGNNCC | 1 cut(s) | 67 |
| NmuCI | GTSAC | 1 cut(s) | 236 |
| PaqCI | CACCTGC | 1 cut(s) | 224 |
| PfeI | GAWTC | 1 cut(s) | 200 |
| PkrI | GCNGC | 2 cut(s) | 78, 131 |
| PleI | GAGTC | 1 cut(s) | 8 |
| PpsI | GAGTC | 1 cut(s) | 8 |
| PspN4I | GGNNCC | 1 cut(s) | 67 |
| SatI | GCNGC | 2 cut(s) | 77, 130 |
| Sau3AI | GATC | 1 cut(s) | 166 |
| SchI | GAGTC | 1 cut(s) | 8 |
| SduI | GDGCHC | 2 cut(s) | 70, 181 |
| SetI | ASST | 3 cut(s) | 27, 138, 238 |
| SfaNI | GCATC | 1 cut(s) | 133 |
| SgrAI | CRCCGGYG | 1 cut(s) | 100 |
| Sse9I | AATT | 2 cut(s) | 189, 216 |
| SsiI | CCGC | 2 cut(s) | 76, 119 |
| TaqI | TCGA | 2 cut(s) | 17, 222 |
| TasI | AATT | 2 cut(s) | 189, 216 |
| TauI | GCSGC | 1 cut(s) | 79 |
| TfiI | GAWTC | 1 cut(s) | 200 |
| TseFI | GTSAC | 1 cut(s) | 236 |
| TseI | GCWGC | 1 cut(s) | 129 |
| Tsp45I | GTSAC | 1 cut(s) | 236 |
| TspDTI | ATGAA | 1 cut(s) | 35 |
| VneI | GTGCAC | 1 cut(s) | 177 |