Rh5AG227200

Serine threonine-protein phosphatase 4 regulatory subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0002676
Physical Location & Seq
Reverse (-)
27217194 .. 27253109
35916 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG227200.1

Sequence Viewer

Length: 303 bp
ATGCATCAAGTGAAAAAAGTGTTGTTGAATAAGGAAAGTGATGCTACCATGTCTTTGGAAGATGATTTTCTTGTTTTCTTGCATGATTGGGACAAATTAAAGAACATGCTATCCTTTCAGCTGAAGCAGATTCTGTCAGAGTATCCTGGTGCAGAAAAGACTAGTGAGCAGCAAATTACTACTTTAGGAGAAACCTACCTAGAACTGGTGAAGAGATTGGATGAAGCTCTTCATGGTTTTACCGAAGGTCCTCCATTTACCCTTCAGAGGCTTTATGAGGTGATCACTTCAACTTTATACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPP4R2

Protein Analysis

100

Amino Acids

11.64

Weight (kDa)

4.93

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 2 cut(s) 143, 248
AfiI CCNNNNNNNGG 2 cut(s) 205, 267
AgsI TTSAA 2 cut(s) 28, 291
AhlI ACTAGT 1 cut(s) 161
AjnI CCWGG 1 cut(s) 145
AloI GAACNNNNNNTCC 2 cut(s) 95, 127
AluBI AGCT 2 cut(s) 121, 227
AluI AGCT 2 cut(s) 121, 227
AlwNI CAGNNNCTG 1 cut(s) 133
ApeKI GCWGC 1 cut(s) 169
Asp700I GAANNNNTTC 1 cut(s) 228
AspS9I GGNCC 1 cut(s) 248
AsuHPI GGTGA 2 cut(s) 220, 292
AvaII GGWCC 1 cut(s) 248
BbvI GCAGC 1 cut(s) 181
BciT130I CCWGG 1 cut(s) 147
BciVI GTATCC 1 cut(s) 153
BclI TGATCA 1 cut(s) 282
BcuI ACTAGT 1 cut(s) 161
BfaI CTAG 3 cut(s) 162, 200, 301
BfuI GTATCC 1 cut(s) 153
BisI GCNGC 1 cut(s) 170
BlsI GCNGC 1 cut(s) 171
Bme1390I CCNGG 1 cut(s) 147
Bme18I GGWCC 1 cut(s) 248
BmgT120I GGNCC 1 cut(s) 248
BmrFI CCNGG 1 cut(s) 147
BmsI GCATC 2 cut(s) 13, 31
Bsc4I CCNNNNNNNGG 2 cut(s) 205, 267
Bse1I ACTGG 1 cut(s) 210
BseBI CCWGG 1 cut(s) 147
BseGI GGATG 1 cut(s) 226
BseLI CCNNNNNNNGG 2 cut(s) 205, 267
BseNI ACTGG 1 cut(s) 210
BseXI GCAGC 1 cut(s) 181
BsgI GTGCAG 1 cut(s) 171
BslFI GGGAC 1 cut(s) 104
BslI CCNNNNNNNGG 2 cut(s) 205, 267
BsmFI GGGAC 1 cut(s) 104
Bsp143I GATC 1 cut(s) 282
BspQI GCTCTTC 1 cut(s) 234
BsrI ACTGG 1 cut(s) 210
BssMI GATC 1 cut(s) 282
Bst2UI CCWGG 1 cut(s) 147
Bst6I CTCTTC 2 cut(s) 206, 234
BstF5I GGATG 1 cut(s) 226
BstKTI GATC 1 cut(s) 285
BstMBI GATC 1 cut(s) 282
BstNI CCWGG 1 cut(s) 147
BstNSI RCATGY 1 cut(s) 109
BstSCI CCNGG 1 cut(s) 145
BstV1I GCAGC 1 cut(s) 181
BstXI CCANNNNNNTGG 1 cut(s) 55
BsuI GTATCC 1 cut(s) 153
BtsCI GGATG 1 cut(s) 226
CaiI CAGNNNCTG 1 cut(s) 133
Cfr13I GGNCC 1 cut(s) 248
CviAII CATG 4 cut(s) 49, 83, 106, 233
CviJI RGCY 3 cut(s) 121, 227, 271
CviKI_1 RGCY 3 cut(s) 121, 227, 271
DpnI GATC 1 cut(s) 284
DpnII GATC 1 cut(s) 282
Eam1104I CTCTTC 2 cut(s) 206, 234
EarI CTCTTC 2 cut(s) 206, 234
Eco47I GGWCC 1 cut(s) 248
Eco57I CTGAAG 2 cut(s) 143, 248
EcoO109I RGGNCCY 1 cut(s) 248
EcoRII CCWGG 1 cut(s) 145
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 4 cut(s) 52, 86, 109, 236
FaiI YATR 6 cut(s) 50, 84, 107, 234, 276, 298
FaqI GGGAC 1 cut(s) 104
FatI CATG 4 cut(s) 48, 82, 105, 232
FbaI TGATCA 1 cut(s) 282
Fnu4HI GCNGC 1 cut(s) 170
FokI GGATG 1 cut(s) 233
Fsp4HI GCNGC 1 cut(s) 170
FspBI CTAG 3 cut(s) 162, 200, 301
GluI GCNGC 1 cut(s) 170
Hin1II CATG 4 cut(s) 52, 86, 109, 236
HinfI GANTC 1 cut(s) 130
HphI GGTGA 2 cut(s) 220, 292
Hpy188I TCNGA 2 cut(s) 139, 267
HpyAV CCTTC 2 cut(s) 239, 272
HpyCH4V TGCA 3 cut(s) 4, 82, 152
Hsp92II CATG 4 cut(s) 52, 86, 109, 236
Ksp22I TGATCA 1 cut(s) 282
Kzo9I GATC 1 cut(s) 282
LguI GCTCTTC 1 cut(s) 234
LpnPI CCDG 3 cut(s) 132, 159, 191
Lsp1109I GCAGC 1 cut(s) 181
LweI GCATC 2 cut(s) 13, 31
MaeI CTAG 3 cut(s) 162, 200, 301
MalI GATC 1 cut(s) 284
MboI GATC 1 cut(s) 282
MboII GAAGA 3 cut(s) 71, 221, 223
MluCI AATT 2 cut(s) 95, 174
MnlI CCTC 3 cut(s) 261, 261, 271
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 228
MseI TTAA 1 cut(s) 98
MspA1I CMGCKG 1 cut(s) 121
MspR9I CCNGG 1 cut(s) 147
MvaI CCWGG 1 cut(s) 147
NdeII GATC 1 cut(s) 282
NlaIII CATG 4 cut(s) 52, 86, 109, 236
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 109
PciSI GCTCTTC 1 cut(s) 234
PdmI GAANNNNTTC 1 cut(s) 228
PfeI GAWTC 1 cut(s) 130
PkrI GCNGC 1 cut(s) 171
PpuMI RGGWCCY 1 cut(s) 248
Psp5II RGGWCCY 1 cut(s) 248
Psp6I CCWGG 1 cut(s) 145
PspGI CCWGG 1 cut(s) 145
PspPI GGNCC 1 cut(s) 248
PspPPI RGGWCCY 1 cut(s) 248
PstNI CAGNNNCTG 1 cut(s) 133
PvuII CAGCTG 1 cut(s) 121
SapI GCTCTTC 1 cut(s) 234
SaqAI TTAA 1 cut(s) 98
SatI GCNGC 1 cut(s) 170
Sau3AI GATC 1 cut(s) 282
Sau96I GGNCC 1 cut(s) 248
ScrFI CCNGG 1 cut(s) 147
SetI ASST 6 cut(s) 123, 197, 201, 229, 250, 282
SfaNI GCATC 2 cut(s) 13, 31
SinI GGWCC 1 cut(s) 248
SpeI ACTAGT 1 cut(s) 161
Sse9I AATT 2 cut(s) 95, 174
SspMI CTAG 3 cut(s) 162, 200, 301
StyD4I CCNGG 1 cut(s) 145
TasI AATT 2 cut(s) 95, 174
TfiI GAWTC 1 cut(s) 130
Tru1I TTAA 1 cut(s) 98
Tru9I TTAA 1 cut(s) 98
TseI GCWGC 1 cut(s) 169
TspDTI ATGAA 2 cut(s) 221, 237
VpaK11BI GGWCC 1 cut(s) 248
XceI RCATGY 1 cut(s) 109
XmnI GAANNNNTTC 1 cut(s) 228
XspI CTAG 3 cut(s) 162, 200, 301
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.