starch biosynthetic process
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17070 AT5G17070 |
| fragaria_vesca | FvH4_7g33790 FvH4_7g33790 FvH4_7g33790 FvH4_7g33790 |
| malus_domestica | MD01G1234200.v1.1 MD07G1306400.v1.1 |
| prunus_persica | Prupe.2G324400_v2.0.a1 Prupe.2G324400_v2.0.a1 |
| pyrus_communis | pycom01g24270 pycom07g27940 |
| rosa_chinensis | RchiOBHm_Chr1g0383921 |
| rosa_laevigata | RLG00000026086 |
| rosa_multiflora | Rmu_co8486869.1_g000001 Rmu_sc0005139.1_g000027 |
| rosa_roxburghii | Rroxscaffold_4G00277150 |
| rosa_rugosa | Rorug01G0443000 |
| rosa_samantha | Rh1AG189200 Rh1AG469000 Rh1BG426700 Rh1CG439500 Rh1DG459500 Rh2AG256200 Rh2AG256300 Rh2AG293800 Rh2BG193800 Rh2CG261600 Rh2DG264600 Rh4DG441900 Rh5AG227200 Rh5AG268100 Rh5BG209000 Rh5BG286400 Rh6CG067100 Rh6DG064000 Rh7BG421000 |
| rosa_wichuraiana | Rw1G002380 Rw1G040340 Rw5G026480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 436 |
| AcsI | RAATTY | 1 cut(s) | 79 |
| AcuI | CTGAAG | 1 cut(s) | 380 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 399, 436 |
| AgsI | TTSAA | 4 cut(s) | 58, 301, 419, 453 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 105, 137 |
| AluBI | AGCT | 5 cut(s) | 17, 242, 290, 359, 442 |
| AluI | AGCT | 5 cut(s) | 17, 242, 290, 359, 442 |
| Alw21I | GWGCWC | 1 cut(s) | 444 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 310 |
| AoxI | GGCC | 1 cut(s) | 124 |
| ApeKI | GCWGC | 3 cut(s) | 17, 287, 356 |
| ApoI | RAATTY | 1 cut(s) | 79 |
| AspS9I | GGNCC | 1 cut(s) | 380 |
| AvaII | GGWCC | 1 cut(s) | 380 |
| BanII | GRGCYC | 1 cut(s) | 444 |
| BbsI | GAAGAC | 2 cut(s) | 120, 340 |
| Bbv12I | GWGCWC | 1 cut(s) | 444 |
| BbvI | GCAGC | 3 cut(s) | 4, 299, 368 |
| BciVI | GTATCC | 1 cut(s) | 330 |
| BclI | TGATCA | 1 cut(s) | 151 |
| BfmI | CTRYAG | 1 cut(s) | 285 |
| BfuI | GTATCC | 1 cut(s) | 330 |
| BisI | GCNGC | 3 cut(s) | 18, 288, 357 |
| BlsI | GCNGC | 3 cut(s) | 19, 289, 358 |
| Bme18I | GGWCC | 1 cut(s) | 380 |
| BmgT120I | GGNCC | 1 cut(s) | 380 |
| BpiI | GAAGAC | 2 cut(s) | 120, 340 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 399, 436 |
| Bse1I | ACTGG | 1 cut(s) | 262 |
| Bse3DI | GCAATG | 1 cut(s) | 351 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 399, 436 |
| BseMI | GCAATG | 1 cut(s) | 351 |
| BseMII | CTCAG | 1 cut(s) | 18 |
| BseNI | ACTGG | 1 cut(s) | 262 |
| BseRI | GAGGAG | 1 cut(s) | 223 |
| BseXI | GCAGC | 3 cut(s) | 4, 299, 368 |
| BshFI | GGCC | 1 cut(s) | 126 |
| BsiHKAI | GWGCWC | 1 cut(s) | 444 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 399, 436 |
| BsmI | GAATGC | 1 cut(s) | 203 |
| BsnI | GGCC | 1 cut(s) | 126 |
| Bsp1286I | GDGCHC | 1 cut(s) | 444 |
| Bsp143I | GATC | 2 cut(s) | 151, 445 |
| BspANI | GGCC | 1 cut(s) | 126 |
| BspCNI | CTCAG | 1 cut(s) | 19 |
| BspMAI | CTGCAG | 1 cut(s) | 289 |
| BspQI | GCTCTTC | 1 cut(s) | 366 |
| BsrDI | GCAATG | 1 cut(s) | 351 |
| BsrI | ACTGG | 1 cut(s) | 262 |
| BssMI | GATC | 2 cut(s) | 151, 445 |
| Bst4CI | ACNGT | 1 cut(s) | 119 |
| Bst6I | CTCTTC | 1 cut(s) | 366 |
| BstDEI | CTNAG | 2 cut(s) | 8, 27 |
| BstKTI | GATC | 2 cut(s) | 154, 448 |
| BstMBI | GATC | 2 cut(s) | 151, 445 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 284 |
| BstSFI | CTRYAG | 1 cut(s) | 285 |
| BstV1I | GCAGC | 3 cut(s) | 4, 299, 368 |
| BstV2I | GAAGAC | 2 cut(s) | 120, 340 |
| BsuI | GTATCC | 1 cut(s) | 330 |
| BsuRI | GGCC | 1 cut(s) | 126 |
| BtsIMutI | CAGTG | 1 cut(s) | 161 |
| CaiI | CAGNNNCTG | 1 cut(s) | 310 |
| Cfr13I | GGNCC | 1 cut(s) | 380 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 241, 276 |
| CviAII | CATG | 3 cut(s) | 149, 365, 475 |
| CviJI | RGCY | 9 cut(s) | 17, 126, 242, 290, 359, 403, 413, 429, 442 |
| CviKI_1 | RGCY | 9 cut(s) | 17, 126, 242, 290, 359, 403, 413, 429, 442 |
| DdeI | CTNAG | 2 cut(s) | 8, 27 |
| DpnI | GATC | 2 cut(s) | 153, 447 |
| DpnII | GATC | 2 cut(s) | 151, 445 |
| Eam1104I | CTCTTC | 1 cut(s) | 366 |
| EarI | CTCTTC | 1 cut(s) | 366 |
| Ecl136II | GAGCTC | 1 cut(s) | 442 |
| Eco24I | GRGCYC | 1 cut(s) | 444 |
| Eco47I | GGWCC | 1 cut(s) | 380 |
| Eco53kI | GAGCTC | 1 cut(s) | 442 |
| Eco57I | CTGAAG | 1 cut(s) | 380 |
| EcoICRI | GAGCTC | 1 cut(s) | 442 |
| EcoO109I | RGGNCCY | 1 cut(s) | 380 |
| EcoT38I | GRGCYC | 1 cut(s) | 444 |
| FaeI | CATG | 3 cut(s) | 152, 368, 478 |
| FaiI | YATR | 8 cut(s) | 53, 150, 248, 341, 343, 366, 408, 476 |
| FatI | CATG | 3 cut(s) | 148, 364, 474 |
| FbaI | TGATCA | 1 cut(s) | 151 |
| Fnu4HI | GCNGC | 3 cut(s) | 18, 288, 357 |
| FriOI | GRGCYC | 1 cut(s) | 444 |
| Fsp4HI | GCNGC | 3 cut(s) | 18, 288, 357 |
| GluI | GCNGC | 3 cut(s) | 18, 288, 357 |
| HaeIII | GGCC | 1 cut(s) | 126 |
| Hin1II | CATG | 3 cut(s) | 152, 368, 478 |
| HinfI | GANTC | 4 cut(s) | 85, 221, 307, 419 |
| Hpy188I | TCNGA | 4 cut(s) | 235, 316, 399, 424 |
| Hpy188III | TCNNGA | 2 cut(s) | 161, 323 |
| HpyAV | CCTTC | 2 cut(s) | 371, 404 |
| HpyCH4III | ACNGT | 1 cut(s) | 119 |
| HpyCH4V | TGCA | 3 cut(s) | 20, 287, 356 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 284 |
| HpyF3I | CTNAG | 2 cut(s) | 8, 27 |
| Hsp92II | CATG | 3 cut(s) | 152, 368, 478 |
| Ksp22I | TGATCA | 1 cut(s) | 151 |
| Kzo9I | GATC | 2 cut(s) | 151, 445 |
| LguI | GCTCTTC | 1 cut(s) | 366 |
| LmnI | GCTCC | 1 cut(s) | 439 |
| LpnPI | CCDG | 4 cut(s) | 174, 243, 254, 336 |
| Lsp1109I | GCAGC | 3 cut(s) | 4, 299, 368 |
| MalI | GATC | 2 cut(s) | 153, 447 |
| MboI | GATC | 2 cut(s) | 151, 445 |
| MboII | GAAGA | 4 cut(s) | 125, 198, 340, 353 |
| MhlI | GDGCHC | 1 cut(s) | 444 |
| MluCI | AATT | 2 cut(s) | 79, 434 |
| MlyI | GAGTC | 1 cut(s) | 79 |
| MnlI | CCTC | 7 cut(s) | 22, 137, 178, 201, 393, 393, 403 |
| Mva1269I | GAATGC | 1 cut(s) | 203 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 284 |
| NdeII | GATC | 2 cut(s) | 151, 445 |
| NlaIII | CATG | 3 cut(s) | 152, 368, 478 |
| PciSI | GCTCTTC | 1 cut(s) | 366 |
| PctI | GAATGC | 1 cut(s) | 203 |
| PfeI | GAWTC | 3 cut(s) | 221, 307, 419 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 436 |
| PkrI | GCNGC | 3 cut(s) | 19, 289, 358 |
| PleI | GAGTC | 1 cut(s) | 79 |
| PpsI | GAGTC | 1 cut(s) | 79 |
| PpuMI | RGGWCCY | 1 cut(s) | 380 |
| Psp124BI | GAGCTC | 1 cut(s) | 444 |
| Psp5II | RGGWCCY | 1 cut(s) | 380 |
| PspPI | GGNCC | 1 cut(s) | 380 |
| PspPPI | RGGWCCY | 1 cut(s) | 380 |
| PstI | CTGCAG | 1 cut(s) | 289 |
| PstNI | CAGNNNCTG | 1 cut(s) | 310 |
| SacI | GAGCTC | 1 cut(s) | 444 |
| SapI | GCTCTTC | 1 cut(s) | 366 |
| SatI | GCNGC | 3 cut(s) | 18, 288, 357 |
| Sau3AI | GATC | 2 cut(s) | 151, 445 |
| Sau96I | GGNCC | 1 cut(s) | 380 |
| SchI | GAGTC | 1 cut(s) | 79 |
| SduI | GDGCHC | 1 cut(s) | 444 |
| SetI | ASST | 8 cut(s) | 19, 33, 170, 244, 292, 361, 382, 444 |
| SfcI | CTRYAG | 1 cut(s) | 285 |
| SinI | GGWCC | 1 cut(s) | 380 |
| Sse9I | AATT | 2 cut(s) | 79, 434 |
| SstI | GAGCTC | 1 cut(s) | 444 |
| TaaI | ACNGT | 1 cut(s) | 119 |
| TaqI | TCGA | 2 cut(s) | 45, 444 |
| TasI | AATT | 2 cut(s) | 79, 434 |
| TfiI | GAWTC | 3 cut(s) | 221, 307, 419 |
| TscAI | CASTG | 1 cut(s) | 161 |
| TseI | GCWGC | 3 cut(s) | 17, 287, 356 |
| TspDTI | ATGAA | 3 cut(s) | 242, 340, 353 |
| TspRI | CASTG | 1 cut(s) | 161 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 436 |
| VpaK11BI | GGWCC | 1 cut(s) | 380 |
| XapI | RAATTY | 1 cut(s) | 79 |