Rh2AG436300

Survival protein SurE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0002356
Physical Location & Seq
Forward (+)
64729452 .. 64733000
3549 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG436300.1

Sequence Viewer

Length: 1119 bp
ATGAGTTCAACATCTGTGAAACCCAACATGCTGCCTGCGGGCCTGGTCTCCAATCTCCAAGACGTGTTGAGCAAAAGAGGTGGAGGTGACCAACCCACTGAGCCTTCAACTTCTGAAGCTGCAGAGGACCCTGTTGATAGTTCCAAGCCCATCGTTTTGGTCACCAATGGTGATGGGATTGACTCCCCTGGTCTTACTTACCTTGTTGAAGCTCTCGTCCGCCAAGGCCTTTACAATGTCCTTGTCTGCGCTCCTCAATCGGACAAATCAGTATCCGGTCATTCCGTGACTCTCCGAGAAACGGTTTCTGTTAGTTCTGCTGAGATAAATGGTGCCACAGCTTATGAAGTTGCAGGTACTCCCGTAGATTGTGTCTCATTAGCGTTATCTGGCGCACTGTTTTCTTGGTCAAAACCTCTGCTGGTAATCAGTGGAATCAACCGGGGATCAAACTGTGGCCATCACATGTTGTACTCAGGTGTTGTTGCTGGAGCTAGGGAGGCACTAATAAGTGGAGTGCCCTCTTTATCAATATCACTAAATTGGAGGAAGGATGAAAGTCAAGAAAATGATTTCAAAGATGCAGTTGCTGTTTGTTTACCTCTAATAAATGCAGCAATCAGGGATATTGAGAAGGGGGAATTCCCCAAGAGTTGCTTTCTGAATATAGAGATTCCTTCATCTCCTTTATCAAACAAGGGTTTTAAAATAACCAAGCAAAGCACGTGGAGATCTACTCCCAGCTGGCAAGCTGTTTCAGCTAATCGTTATCCTCCTGGACATTTCATGAACAGTCAACAAAGCCTTGGGATTCAGCTTGCACAACTTGGCCGAGATGCATCTGCTGCCGGTGCAGCTCGTCGTGTGACGACACAGAAGAAGAATGTGGAGATTGAATCAATTGGAGCTGCAGGAAAATCTGATTTTGAACGGGTGAAAAAGTACTTCCGACTAGAGTTTGTGGATAAAGACCAGGAAAATACGGATGAGGATCTGGATTTCAGAGCACTCGAAAGCGGATTTGTATCGGTAACTCCTCTTTCCCTTTCACCACATCTCGAGTCCGATACTCAAACAGCTGCCTCCAATTGGATCTCGTCTGCACTTCAAGAGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko00760 ko01100 ko01110 map00230 map00240 map00760 map01100 map01110
Pfam Domains
Protein Families
SurE

Protein Analysis

372

Amino Acids

39.73

Weight (kDa)

5.19

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SurE PF01975 52 - 244 3e-52 Survival protein SurE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 344
AccB1I GGYRCC 1 cut(s) 332
AciI CCGC 3 cut(s) 38, 220, 1017
AclWI GGATC 3 cut(s) 454, 999, 1100
AcoI YGGCCR 2 cut(s) 457, 829
AcsI RAATTY 1 cut(s) 641
AcuI CTGAAG 1 cut(s) 135
AcvI CACGTG 1 cut(s) 726
AfaI GTAC 3 cut(s) 358, 473, 944
AfiI CCNNNNNNNGG 2 cut(s) 301, 1089
AflIII ACRYGT 2 cut(s) 63, 465
AgsI TTSAA 7 cut(s) 9, 108, 209, 577, 896, 929, 1109
AjiI CACGTC 1 cut(s) 64
AjnI CCWGG 4 cut(s) 42, 187, 775, 972
Alw21I GWGCWC 1 cut(s) 1009
Alw26I GTCTC 2 cut(s) 52, 379
AlwI GGATC 3 cut(s) 454, 999, 1100
AlwNI CAGNNNCTG 1 cut(s) 590
Ama87I CYCGRG 1 cut(s) 1058
AoxI GGCC 4 cut(s) 40, 226, 457, 829
ApeKI GCWGC 7 cut(s) 31, 119, 614, 845, 854, 908, 1079
ApoI RAATTY 1 cut(s) 641
AspLEI GCGC 2 cut(s) 251, 395
AspS9I GGNCC 2 cut(s) 40, 127
AsuC2I CCSGG 1 cut(s) 443
AsuHPI GGTGA 5 cut(s) 98, 154, 182, 946, 1041
AvaI CYCGRG 1 cut(s) 1058
AvaII GGWCC 1 cut(s) 127
BaeGI GKGCMC 1 cut(s) 522
BaeI ACNNNNGTAYC 2 cut(s) 348, 381
BalI TGGCCA 1 cut(s) 459
BanI GGYRCC 1 cut(s) 332
BbrPI CACGTG 1 cut(s) 726
Bbv12I GWGCWC 1 cut(s) 1009
BbvI GCAGC 7 cut(s) 18, 106, 626, 832, 866, 895, 1066
BccI CCATC 3 cut(s) 158, 167, 468
BciT130I CCWGG 4 cut(s) 44, 189, 777, 974
BciVI GTATCC 1 cut(s) 283
BcnI CCSGG 1 cut(s) 443
BcoDI GTCTC 2 cut(s) 52, 379
BfaI CTAG 2 cut(s) 495, 953
BfmI CTRYAG 2 cut(s) 120, 909
BfuAI ACCTGC 1 cut(s) 344
BfuI GTATCC 1 cut(s) 283
BglII AGATCT 1 cut(s) 731
BisI GCNGC 7 cut(s) 32, 120, 615, 846, 855, 909, 1080
BlsI GCNGC 7 cut(s) 33, 121, 616, 847, 856, 910, 1081
BmcAI AGTACT 1 cut(s) 944
Bme1390I CCNGG 5 cut(s) 44, 189, 443, 777, 974
Bme18I GGWCC 1 cut(s) 127
BmeT110I CYCGRG 1 cut(s) 1058
BmgBI CACGTC 1 cut(s) 64
BmgT120I GGNCC 2 cut(s) 40, 127
BmiI GGNNCC 2 cut(s) 129, 334
BmrFI CCNGG 5 cut(s) 44, 189, 443, 777, 974
BmsI GCATC 3 cut(s) 571, 826, 848
BplI GAGNNNNNCTC 2 cut(s) 721, 753
BpmI CTGGAG 1 cut(s) 510
BpuMI CCSGG 1 cut(s) 443
BsaAI YACGTR 1 cut(s) 726
BsaBI GATNNNNATC 2 cut(s) 990, 1024
BsaI GGTCTC 1 cut(s) 52
BsaJI CCNNGG 4 cut(s) 187, 223, 442, 805
BsaWI WCCGGW 1 cut(s) 275
Bsc4I CCNNNNNNNGG 2 cut(s) 301, 1089
Bse118I RCCGGY 1 cut(s) 848
Bse8I GATNNNNATC 2 cut(s) 990, 1024
BseBI CCWGG 4 cut(s) 44, 189, 777, 974
BseDI CCNNGG 4 cut(s) 187, 223, 442, 805
BseGI GGATG 2 cut(s) 559, 991
BseJI GATNNNNATC 2 cut(s) 990, 1024
BseLI CCNNNNNNNGG 2 cut(s) 301, 1089
BseMII CTCAG 3 cut(s) 90, 312, 489
BseRI GAGGAG 2 cut(s) 243, 1026
BseSI GKGCMC 1 cut(s) 522
BseXI GCAGC 7 cut(s) 18, 106, 626, 832, 866, 895, 1066
BseYI CCCAGC 1 cut(s) 740
BsgI GTGCAG 2 cut(s) 873, 1086
BshFI GGCC 4 cut(s) 42, 228, 459, 831
BshNI GGYRCC 1 cut(s) 332
BsiHKAI GWGCWC 1 cut(s) 1009
BsiHKCI CYCGRG 1 cut(s) 1058
BsiSI CCGG 3 cut(s) 276, 442, 849
BslI CCNNNNNNNGG 2 cut(s) 301, 1089
BsmAI GTCTC 2 cut(s) 52, 379
BsnI GGCC 4 cut(s) 42, 228, 459, 831
Bso31I GGTCTC 1 cut(s) 52
BsoBI CYCGRG 1 cut(s) 1058
Bsp1286I GDGCHC 2 cut(s) 522, 1009
Bsp143I GATC 4 cut(s) 446, 731, 991, 1092
BspACI CCGC 3 cut(s) 38, 220, 1017
BspANI GGCC 4 cut(s) 42, 228, 459, 831
BspCNI CTCAG 3 cut(s) 91, 313, 488
BspHI TCATGA 1 cut(s) 786
BspLI GGNNCC 2 cut(s) 129, 334
BspMAI CTGCAG 2 cut(s) 124, 913
BspMI ACCTGC 1 cut(s) 344
BspPI GGATC 3 cut(s) 454, 999, 1100
BspT107I GGYRCC 1 cut(s) 332
BspTNI GGTCTC 1 cut(s) 52
BsrFI RCCGGY 1 cut(s) 848
BssAI RCCGGY 1 cut(s) 848
BssECI CCNNGG 4 cut(s) 187, 223, 442, 805
BssMI GATC 4 cut(s) 446, 731, 991, 1092
BssT1I CCWWGG 2 cut(s) 223, 805
Bst2UI CCWGG 4 cut(s) 44, 189, 777, 974
Bst4CI ACNGT 4 cut(s) 304, 399, 455, 794
BstAPI GCANNNNNTGC 1 cut(s) 845
BstBAI YACGTR 1 cut(s) 726
BstC8I GCNNGC 5 cut(s) 36, 40, 746, 750, 819
BstDEI CTNAG 3 cut(s) 99, 321, 475
BstEII GGTNACC 2 cut(s) 86, 160
BstF5I GGATG 2 cut(s) 559, 991
BstHHI GCGC 2 cut(s) 251, 395
BstKTI GATC 4 cut(s) 449, 734, 994, 1095
BstMAI GTCTC 2 cut(s) 52, 379
BstMBI GATC 4 cut(s) 446, 731, 991, 1092
BstMWI GCNNNNNNNGC 5 cut(s) 500, 758, 845, 851, 854
BstNI CCWGG 4 cut(s) 44, 189, 777, 974
BstNSI RCATGY 2 cut(s) 31, 469
BstPI GGTNACC 2 cut(s) 86, 160
BstSCI CCNGG 5 cut(s) 42, 187, 441, 775, 972
BstSFI CTRYAG 2 cut(s) 120, 909
BstSLI GKGCMC 1 cut(s) 522
BstV1I GCAGC 7 cut(s) 18, 106, 626, 832, 866, 895, 1066
BstX2I RGATCY 3 cut(s) 731, 991, 1092
BstXI CCANNNNNNTGG 1 cut(s) 157
BstYI RGATCY 3 cut(s) 731, 991, 1092
BsuI GTATCC 1 cut(s) 283
BsuRI GGCC 4 cut(s) 42, 228, 459, 831
BtrI CACGTC 1 cut(s) 64
BtsCI GGATG 2 cut(s) 559, 991
BtsIMutI CAGTG 3 cut(s) 96, 395, 436
BveI ACCTGC 1 cut(s) 344
Cac8I GCNNGC 5 cut(s) 36, 40, 746, 750, 819
CaiI CAGNNNCTG 1 cut(s) 590
CciI TCATGA 1 cut(s) 786
CfoI GCGC 2 cut(s) 251, 395
Cfr10I RCCGGY 1 cut(s) 848
Cfr13I GGNCC 2 cut(s) 40, 127
Csp6I GTAC 3 cut(s) 357, 472, 943
CspCI CAANNNNNGTGG 4 cut(s) 61, 96, 707, 742
CviAII CATG 3 cut(s) 28, 466, 787
CviQI GTAC 3 cut(s) 357, 472, 943
DdeI CTNAG 3 cut(s) 99, 321, 475
DpnI GATC 4 cut(s) 448, 733, 993, 1094
DpnII GATC 4 cut(s) 446, 731, 991, 1092
DraI TTTAAA 1 cut(s) 706
EaeI YGGCCR 2 cut(s) 457, 829
EciI GGCGGA 1 cut(s) 209
Eco130I CCWWGG 2 cut(s) 223, 805
Eco147I AGGCCT 1 cut(s) 228
Eco31I GGTCTC 1 cut(s) 52
Eco47I GGWCC 1 cut(s) 127
Eco57I CTGAAG 1 cut(s) 135
Eco72I CACGTG 1 cut(s) 726
Eco88I CYCGRG 1 cut(s) 1058
Eco91I GGTNACC 2 cut(s) 86, 160
EcoO109I RGGNCCY 1 cut(s) 127
EcoO65I GGTNACC 2 cut(s) 86, 160
EcoRI GAATTC 1 cut(s) 641
EcoRII CCWGG 4 cut(s) 42, 187, 775, 972
EcoT14I CCWWGG 2 cut(s) 223, 805
EcoT22I ATGCAT 1 cut(s) 841
ErhI CCWWGG 2 cut(s) 223, 805
FaeI CATG 3 cut(s) 31, 469, 790
FaiI YATR 5 cut(s) 29, 345, 467, 668, 788
FalI AAGNNNNNCTT 2 cut(s) 641, 673
FatI CATG 3 cut(s) 27, 465, 786
FauI CCCGC 1 cut(s) 31
Fnu4HI GCNGC 7 cut(s) 32, 120, 615, 846, 855, 909, 1080
FokI GGATG 2 cut(s) 566, 998
Fsp4HI GCNGC 7 cut(s) 32, 120, 615, 846, 855, 909, 1080
FspBI CTAG 2 cut(s) 495, 953
GlaI GCGC 2 cut(s) 250, 394
GluI GCNGC 7 cut(s) 32, 120, 615, 846, 855, 909, 1080
GsaI CCCAGC 1 cut(s) 744
GsuI CTGGAG 1 cut(s) 510
HaeIII GGCC 4 cut(s) 42, 228, 459, 831
HapII CCGG 3 cut(s) 276, 442, 849
HhaI GCGC 2 cut(s) 251, 395
Hin1II CATG 3 cut(s) 31, 469, 790
Hin6I GCGC 2 cut(s) 249, 393
HinP1I GCGC 2 cut(s) 249, 393
HincII GTYRAC 1 cut(s) 797
HindII GTYRAC 1 cut(s) 797
HinfI GANTC 7 cut(s) 182, 289, 435, 673, 811, 896, 1061
HpaII CCGG 3 cut(s) 276, 442, 849
HphI GGTGA 5 cut(s) 98, 154, 182, 946, 1041
Hpy166II GTNNAC 2 cut(s) 599, 797
Hpy188I TCNGA 8 cut(s) 115, 262, 296, 663, 922, 950, 1004, 1066
Hpy188III TCNNGA 5 cut(s) 563, 787, 995, 1058, 1109
Hpy8I GTNNAC 2 cut(s) 599, 797
Hpy99I CGWCG 1 cut(s) 864
HpyAV CCTTC 4 cut(s) 114, 544, 628, 687
HpyCH4III ACNGT 4 cut(s) 304, 399, 455, 794
HpyCH4IV ACGT 2 cut(s) 63, 725
HpyCH4V TGCA 9 cut(s) 122, 353, 584, 614, 821, 839, 854, 911, 1103
HpyF10VI GCNNNNNNNGC 5 cut(s) 500, 758, 845, 851, 854
HpyF3I CTNAG 3 cut(s) 99, 321, 475
HpySE526I ACGT 2 cut(s) 63, 725
Hsp92II CATG 3 cut(s) 31, 469, 790
HspAI GCGC 2 cut(s) 249, 393
Kzo9I GATC 4 cut(s) 446, 731, 991, 1092
LmnI GCTCC 3 cut(s) 256, 491, 905
Lsp1109I GCAGC 7 cut(s) 18, 106, 626, 832, 866, 895, 1066
LweI GCATC 3 cut(s) 571, 826, 848
MaeI CTAG 2 cut(s) 495, 953
MaeII ACGT 2 cut(s) 63, 725
MaeIII GTNAC 5 cut(s) 86, 160, 286, 865, 1030
MalI GATC 4 cut(s) 448, 733, 993, 1094
MboI GATC 4 cut(s) 446, 731, 991, 1092
MboII GAAGA 2 cut(s) 889, 892
MfeI CAATTG 2 cut(s) 900, 1087
MflI RGATCY 3 cut(s) 731, 991, 1092
MhlI GDGCHC 2 cut(s) 522, 1009
MlsI TGGCCA 1 cut(s) 459
MluCI AATT 4 cut(s) 541, 641, 900, 1087
MluNI TGGCCA 1 cut(s) 459
MlyI GAGTC 3 cut(s) 176, 283, 1070
MmeI TCCRAC 1 cut(s) 973
Mox20I TGGCCA 1 cut(s) 459
Mph1103I ATGCAT 1 cut(s) 841
MscI TGGCCA 1 cut(s) 459
MseI TTAA 1 cut(s) 705
Msp20I TGGCCA 1 cut(s) 459
MspA1I CMGCKG 2 cut(s) 744, 1079
MspI CCGG 3 cut(s) 276, 442, 849
MspR9I CCNGG 5 cut(s) 44, 189, 443, 777, 974
MunI CAATTG 2 cut(s) 900, 1087
MvaI CCWGG 4 cut(s) 44, 189, 777, 974
MwoI GCNNNNNNNGC 5 cut(s) 500, 758, 845, 851, 854
NciI CCSGG 1 cut(s) 443
NdeII GATC 4 cut(s) 446, 731, 991, 1092
NlaIII CATG 3 cut(s) 31, 469, 790
NlaIV GGNNCC 2 cut(s) 129, 334
NmeAIII GCCGAG 1 cut(s) 857
NmuCI GTSAC 4 cut(s) 86, 160, 286, 865
NsiI ATGCAT 1 cut(s) 841
NspI RCATGY 2 cut(s) 31, 469
PaeR7I CTCGAG 1 cut(s) 1058
PagI TCATGA 1 cut(s) 786
PceI AGGCCT 1 cut(s) 228
PciI ACATGT 1 cut(s) 465
PfeI GAWTC 4 cut(s) 435, 673, 811, 896
PfoI TCCNGGA 1 cut(s) 775
PkrI GCNGC 7 cut(s) 33, 121, 616, 847, 856, 910, 1081
PleI GAGTC 3 cut(s) 176, 283, 1069
PmaCI CACGTG 1 cut(s) 726
PmlI CACGTG 1 cut(s) 726
PpsI GAGTC 3 cut(s) 176, 283, 1069
Ppu21I YACGTR 1 cut(s) 726
PpuMI RGGWCCY 1 cut(s) 127
PscI ACATGT 1 cut(s) 465
Psp5II RGGWCCY 1 cut(s) 127
Psp6I CCWGG 4 cut(s) 42, 187, 775, 972
PspCI CACGTG 1 cut(s) 726
PspEI GGTNACC 2 cut(s) 86, 160
PspFI CCCAGC 1 cut(s) 740
PspGI CCWGG 4 cut(s) 42, 187, 775, 972
PspN4I GGNNCC 2 cut(s) 129, 334
PspPI GGNCC 2 cut(s) 40, 127
PspPPI RGGWCCY 1 cut(s) 127
PstI CTGCAG 2 cut(s) 124, 913
PstNI CAGNNNCTG 1 cut(s) 590
PsuI RGATCY 3 cut(s) 731, 991, 1092
PvuII CAGCTG 2 cut(s) 744, 1079
RsaI GTAC 3 cut(s) 358, 473, 944
RsaNI GTAC 3 cut(s) 357, 472, 943
SaqAI TTAA 1 cut(s) 705
SatI GCNGC 7 cut(s) 32, 120, 615, 846, 855, 909, 1080
Sau3AI GATC 4 cut(s) 446, 731, 991, 1092
Sau96I GGNCC 2 cut(s) 40, 127
ScaI AGTACT 1 cut(s) 944
SchI GAGTC 3 cut(s) 176, 283, 1070
ScrFI CCNGG 5 cut(s) 44, 189, 443, 777, 974
SduI GDGCHC 2 cut(s) 522, 1009
SfaNI GCATC 3 cut(s) 571, 826, 848
SfcI CTRYAG 2 cut(s) 120, 909
Sfr274I CTCGAG 1 cut(s) 1058
SinI GGWCC 1 cut(s) 127
SlaI CTCGAG 1 cut(s) 1058
SmlI CTYRAG 1 cut(s) 1058
SmoI CTYRAG 1 cut(s) 1058
Sse9I AATT 4 cut(s) 541, 641, 900, 1087
SseBI AGGCCT 1 cut(s) 228
SsiI CCGC 3 cut(s) 38, 220, 1017
SspMI CTAG 2 cut(s) 495, 953
StuI AGGCCT 1 cut(s) 228
StyD4I CCNGG 5 cut(s) 42, 187, 441, 775, 972
StyI CCWWGG 2 cut(s) 223, 805
TaaI ACNGT 4 cut(s) 304, 399, 455, 794
TaiI ACGT 2 cut(s) 66, 728
TaqI TCGA 2 cut(s) 1011, 1059
TasI AATT 4 cut(s) 541, 641, 900, 1087
TatI WGTACW 2 cut(s) 471, 942
TfiI GAWTC 4 cut(s) 435, 673, 811, 896
Tru1I TTAA 1 cut(s) 705
Tru9I TTAA 1 cut(s) 705
TscAI CASTG 3 cut(s) 103, 402, 436
TseFI GTSAC 4 cut(s) 86, 160, 286, 865
TseI GCWGC 7 cut(s) 31, 119, 614, 845, 854, 908, 1079
Tsp45I GTSAC 4 cut(s) 86, 160, 286, 865
TspDTI ATGAA 5 cut(s) 360, 570, 669, 775, 803
TspGWI ACGGA 2 cut(s) 274, 998
TspRI CASTG 3 cut(s) 103, 402, 436
VpaK11BI GGWCC 1 cut(s) 127
XapI RAATTY 1 cut(s) 641
XceI RCATGY 2 cut(s) 31, 469
XhoI CTCGAG 1 cut(s) 1058
XspI CTAG 2 cut(s) 495, 953
ZrmI AGTACT 1 cut(s) 944
Zsp2I ATGCAT 1 cut(s) 841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.