Rh2CG087800

Survival protein SurE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0002356
Physical Location & Seq
Forward (+)
7227585 .. 7229814
2230 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG087800.1

Sequence Viewer

Length: 1188 bp
ATGACGACCTCTCTGAAAAGCAGTTTCATGCCTCCGAGCTTGATCTCGAATCTTCAACAAGTTTTGGCTCTCAAAAGCGACGGTGCAGAGAAGCATGCTTCTGAACCAAACAAAGTTTCTTGTAATTCTTCTTCTTCCTCTTCATGTTGCGCTTTGATGCCTTCTGAGCACACTAAAGACAAGCAGTGTCCAAAGCCAGTGGTTTTAGTCACAAATGGAGAGGGAATCGAGTCTCCTGGCCTCACATTTCTCGTCCAAGCTCTCCTTCTCGATTCTCATCTTGAGGTCTGCGTCTGCGCTCCTAAATCAGATAGATCAGTGGCTGGCCACTCTGTAACTGTTGGTGAGACAATTTCAGTGTCTTCTGCACAAATCAATGGCGCCACAGCTTTTGAAGTTTCCGGGACTCCTGCGGATTGTGTCTCTTTAGCATTATCAGGGGCATTGTTCTCCAACTTTTCAAAGCCTGCTTTGGTAGTCAGTGGAATAAACAGAGGATCAAGTTCTGGAATCAACATGTTCTACTCGGGTGCTGTTGCTGGAGCTAGAGAGGCGTTGCTATGCGGTGTACCCTCTCTGTGCATATCAATGAATTGGAAGAAGGATGTAAGCTGTGAAAGTGATATGAAGGATGCAGCCACTGTGTGCTCACCGTTGATATGTGCAGCTGTAAAAAGCATCCAGGAGGGAGTTTTCCCCAAAAGTTGTTTACTCAATATTGAGATTCCTAGTTGTCCTTTGACAAATAAGGGCTTCAAAGTGACCAAGCAGAGTCAGTGGAGGTCCTCTTTGAGCTGGAAAGCTGTGTCAACAAACAAACATCCTCCCCCTGCAAATTTCATGTCCAATCAGCAAAGCCTTGGTATTCAACTAGCACAGCTCAGCCGCGAAGCTTCAATAGCTGGTGCAGCTCGCCGCTTGAACTCTCAGCGCAAGACTGTAGAGGTTGAATCGGTTGGTGTAGCCAGAAAAATGAGCTCCCAAAAAACAGTAAAATTCTTCCGTTTAGAGTTCTTAGAGGAGCAGCAGGAATATGTAGATGAAGATCTAGATATCAGAGCACTTGAAGATGGATTTGTTGCGATTACTCCGATTTGCTTATCTCCATCTGTTCAATCGGAAATTCAAACGTCAGTGTCGAATTGGATTGCTGGAGCAGTACTTTCGAACAACCGGTTGGCATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko00760 ko01100 ko01110 map00230 map00240 map00760 map01100 map01110
Pfam Domains
Protein Families
SurE

Protein Analysis

395

Amino Acids

41.91

Weight (kDa)

7.44

Isoelectric Point (pI)

52.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SurE PF01975 68 - 262 9.6e-51 Survival protein SurE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 380
AccII CGCG 1 cut(s) 888
AciI CCGC 4 cut(s) 413, 564, 886, 916
AclWI GGATC 1 cut(s) 505
AcoI YGGCCR 1 cut(s) 325
AcsI RAATTY 3 cut(s) 835, 995, 1122
AcyI GRCGYC 1 cut(s) 381
AdeI CACNNNGTG 1 cut(s) 645
AfaI GTAC 2 cut(s) 570, 1161
AflIII ACRYGT 1 cut(s) 516
AgeI ACCGGT 1 cut(s) 1173
AjnI CCWGG 2 cut(s) 235, 681
AjuI GAANNNNNNNTTGG 5 cut(s) 100, 132, 249, 281, 1160
Alw21I GWGCWC 4 cut(s) 171, 650, 980, 1063
Alw26I GTCTC 3 cut(s) 237, 341, 427
AlwI GGATC 1 cut(s) 505
AlwNI CAGNNNCTG 2 cut(s) 323, 641
Ama87I CYCGRG 1 cut(s) 526
AoxI GGCC 2 cut(s) 238, 325
ApeKI GCWGC 4 cut(s) 635, 665, 908, 1024
ApoI RAATTY 3 cut(s) 835, 995, 1122
ArsI GACNNNNNNTTYG 2 cut(s) 827, 859
AsiGI ACCGGT 1 cut(s) 1173
AspLEI GCGC 4 cut(s) 152, 299, 383, 933
AspS9I GGNCC 1 cut(s) 783
AsuC2I CCSGG 1 cut(s) 403
AsuHPI GGTGA 2 cut(s) 356, 642
AsuII TTCGAA 1 cut(s) 1166
AvaI CYCGRG 1 cut(s) 526
AvaII GGWCC 1 cut(s) 783
BalI TGGCCA 1 cut(s) 327
BanI GGYRCC 1 cut(s) 380
BanII GRGCYC 1 cut(s) 980
BarI GAAGNNNNNNTAC 2 cut(s) 115, 147
BbsI GAAGAC 1 cut(s) 354
Bbv12I GWGCWC 4 cut(s) 171, 650, 980, 1063
BbvI GCAGC 4 cut(s) 647, 677, 920, 1036
BccI CCATC 2 cut(s) 1064, 1114
BcgI CGANNNNNNTGC 2 cut(s) 1146, 1180
BciT130I CCWGG 2 cut(s) 237, 683
BcnI CCSGG 1 cut(s) 403
BcoDI GTCTC 3 cut(s) 237, 341, 427
BfaI CTAG 4 cut(s) 546, 729, 872, 1049
BfmI CTRYAG 1 cut(s) 939
BfoI RGCGCY 1 cut(s) 384
BglII AGATCT 1 cut(s) 1045
BisI GCNGC 6 cut(s) 636, 666, 886, 909, 916, 1025
BlpI GCTNAGC 1 cut(s) 881
BlsI GCNGC 6 cut(s) 637, 667, 887, 910, 917, 1026
BmcAI AGTACT 1 cut(s) 1161
Bme1390I CCNGG 3 cut(s) 237, 403, 683
Bme18I GGWCC 1 cut(s) 783
BmeT110I CYCGRG 1 cut(s) 526
BmgT120I GGNCC 1 cut(s) 783
BmiI GGNNCC 1 cut(s) 382
BmrFI CCNGG 3 cut(s) 237, 403, 683
BmsI GCATC 3 cut(s) 147, 622, 687
BpiI GAAGAC 1 cut(s) 354
BpmI CTGGAG 2 cut(s) 561, 1173
Bpu1102I GCTNAGC 1 cut(s) 881
Bpu14I TTCGAA 1 cut(s) 1166
BpuEI CTTGAG 1 cut(s) 302
BpuMI CCSGG 1 cut(s) 403
BsaBI GATNNNNATC 2 cut(s) 276, 1044
BsaHI GRCGYC 1 cut(s) 381
BsaJI CCNNGG 1 cut(s) 859
BsaWI WCCGGW 1 cut(s) 1173
Bse118I RCCGGY 1 cut(s) 1173
Bse1I ACTGG 1 cut(s) 197
Bse8I GATNNNNATC 2 cut(s) 276, 1044
BseBI CCWGG 2 cut(s) 237, 683
BseDI CCNNGG 1 cut(s) 859
BseGI GGATG 4 cut(s) 610, 637, 678, 820
BseJI GATNNNNATC 2 cut(s) 276, 1044
BseMII CTCAG 3 cut(s) 156, 895, 941
BseNI ACTGG 1 cut(s) 197
BseRI GAGGAG 1 cut(s) 1034
BseXI GCAGC 4 cut(s) 647, 677, 920, 1036
BsgI GTGCAG 4 cut(s) 105, 351, 684, 927
Bsh1236I CGCG 1 cut(s) 888
BshFI GGCC 2 cut(s) 240, 327
BshNI GGYRCC 1 cut(s) 380
BshTI ACCGGT 1 cut(s) 1173
BsiHKAI GWGCWC 4 cut(s) 171, 650, 980, 1063
BsiHKCI CYCGRG 1 cut(s) 526
BsiSI CCGG 2 cut(s) 402, 1174
BslFI GGGAC 1 cut(s) 418
BsmAI GTCTC 3 cut(s) 237, 341, 427
BsmFI GGGAC 1 cut(s) 418
BsnI GGCC 2 cut(s) 240, 327
BsoBI CYCGRG 1 cut(s) 526
Bsp119I TTCGAA 1 cut(s) 1166
Bsp1286I GDGCHC 4 cut(s) 171, 650, 980, 1063
Bsp143I GATC 4 cut(s) 42, 314, 497, 1045
Bsp1720I GCTNAGC 1 cut(s) 881
BspACI CCGC 4 cut(s) 413, 564, 886, 916
BspANI GGCC 2 cut(s) 240, 327
BspCNI CTCAG 3 cut(s) 157, 894, 940
BspFNI CGCG 1 cut(s) 888
BspLI GGNNCC 1 cut(s) 382
BspPI GGATC 1 cut(s) 505
BspT104I TTCGAA 1 cut(s) 1166
BspT107I GGYRCC 1 cut(s) 380
BsrFI RCCGGY 1 cut(s) 1173
BsrI ACTGG 1 cut(s) 197
BssAI RCCGGY 1 cut(s) 1173
BssECI CCNNGG 1 cut(s) 859
BssMI GATC 4 cut(s) 42, 314, 497, 1045
BssNI GRCGYC 1 cut(s) 381
BssT1I CCWWGG 1 cut(s) 859
Bst2UI CCWGG 2 cut(s) 237, 683
Bst4CI ACNGT 6 cut(s) 83, 340, 643, 654, 940, 991
Bst6I CTCTTC 1 cut(s) 145
BstACI GRCGYC 1 cut(s) 381
BstBI TTCGAA 1 cut(s) 1166
BstC8I GCNNGC 4 cut(s) 96, 325, 468, 913
BstDEI CTNAG 4 cut(s) 165, 881, 927, 1015
BstF5I GGATG 4 cut(s) 610, 637, 678, 820
BstFNI CGCG 1 cut(s) 888
BstH2I RGCGCY 1 cut(s) 384
BstHHI GCGC 4 cut(s) 152, 299, 383, 933
BstKTI GATC 4 cut(s) 45, 317, 500, 1048
BstMAI GTCTC 3 cut(s) 237, 341, 427
BstMBI GATC 4 cut(s) 42, 314, 497, 1045
BstMWI GCNNNNNNNGC 4 cut(s) 166, 551, 899, 908
BstNI CCWGG 2 cut(s) 237, 683
BstNSI RCATGY 2 cut(s) 98, 520
BstSCI CCNGG 3 cut(s) 235, 401, 681
BstSFI CTRYAG 1 cut(s) 939
BstUI CGCG 1 cut(s) 888
BstV1I GCAGC 4 cut(s) 647, 677, 920, 1036
BstV2I GAAGAC 1 cut(s) 354
BstX2I RGATCY 1 cut(s) 1045
BstYI RGATCY 1 cut(s) 1045
BsuRI GGCC 2 cut(s) 240, 327
BtsCI GGATG 4 cut(s) 610, 637, 678, 820
BtsI GCAGTG 1 cut(s) 191
BtsIMutI CAGTG 8 cut(s) 191, 204, 324, 363, 487, 639, 782, 1140
Cac8I GCNNGC 4 cut(s) 96, 325, 468, 913
CaiI CAGNNNCTG 2 cut(s) 323, 641
CfoI GCGC 4 cut(s) 152, 299, 383, 933
Cfr10I RCCGGY 1 cut(s) 1173
Cfr13I GGNCC 1 cut(s) 783
CseI GACGC 1 cut(s) 280
Csp6I GTAC 2 cut(s) 569, 1160
CspAI ACCGGT 1 cut(s) 1173
CspCI CAANNNNNGTGG 4 cut(s) 180, 215, 373, 408
CviAII CATG 5 cut(s) 28, 95, 144, 517, 841
CviQI GTAC 2 cut(s) 569, 1160
DdeI CTNAG 4 cut(s) 165, 881, 927, 1015
DinI GGCGCC 1 cut(s) 382
DpnI GATC 4 cut(s) 44, 316, 499, 1047
DpnII GATC 4 cut(s) 42, 314, 497, 1045
DraIII CACNNNGTG 1 cut(s) 645
EaeI YGGCCR 1 cut(s) 325
Eam1104I CTCTTC 1 cut(s) 145
EarI CTCTTC 1 cut(s) 145
Ecl136II GAGCTC 1 cut(s) 978
Eco130I CCWWGG 1 cut(s) 859
Eco24I GRGCYC 1 cut(s) 980
Eco32I GATATC 1 cut(s) 1054
Eco47I GGWCC 1 cut(s) 783
Eco53kI GAGCTC 1 cut(s) 978
Eco88I CYCGRG 1 cut(s) 526
EcoICRI GAGCTC 1 cut(s) 978
EcoO109I RGGNCCY 1 cut(s) 783
EcoRII CCWGG 2 cut(s) 235, 681
EcoRV GATATC 1 cut(s) 1054
EcoT14I CCWWGG 1 cut(s) 859
EcoT38I GRGCYC 1 cut(s) 980
EgeI GGCGCC 1 cut(s) 382
EheI GGCGCC 1 cut(s) 382
ErhI CCWWGG 1 cut(s) 859
FaeI CATG 5 cut(s) 31, 98, 147, 520, 844
FalI AAGNNNNNCTT 2 cut(s) 249, 281
FaqI GGGAC 1 cut(s) 418
FatI CATG 5 cut(s) 27, 94, 143, 516, 840
Fnu4HI GCNGC 6 cut(s) 636, 666, 886, 909, 916, 1025
FokI GGATG 4 cut(s) 617, 644, 665, 807
FriOI GRGCYC 1 cut(s) 980
Fsp4HI GCNGC 6 cut(s) 636, 666, 886, 909, 916, 1025
FspBI CTAG 4 cut(s) 546, 729, 872, 1049
GlaI GCGC 4 cut(s) 151, 298, 382, 932
GluI GCNGC 6 cut(s) 636, 666, 886, 909, 916, 1025
GsuI CTGGAG 2 cut(s) 561, 1173
HaeII RGCGCY 1 cut(s) 384
HaeIII GGCC 2 cut(s) 240, 327
HapII CCGG 2 cut(s) 402, 1174
HgaI GACGC 1 cut(s) 280
HhaI GCGC 4 cut(s) 152, 299, 383, 933
Hin1I GRCGYC 1 cut(s) 381
Hin1II CATG 5 cut(s) 31, 98, 147, 520, 844
Hin6I GCGC 4 cut(s) 150, 297, 381, 931
HinP1I GCGC 4 cut(s) 150, 297, 381, 931
HincII GTYRAC 1 cut(s) 810
HindII GTYRAC 1 cut(s) 810
HindIII AAGCTT 1 cut(s) 891
HinfI GANTC 9 cut(s) 49, 225, 230, 272, 406, 510, 724, 772, 950
HpaII CCGG 2 cut(s) 402, 1174
HphI GGTGA 2 cut(s) 356, 642
Hpy166II GTNNAC 3 cut(s) 569, 710, 810
Hpy188I TCNGA 8 cut(s) 15, 36, 103, 166, 310, 1058, 1092, 1120
Hpy188III TCNNGA 5 cut(s) 46, 269, 281, 507, 1049
Hpy8I GTNNAC 3 cut(s) 569, 710, 810
Hpy99I CGWCG 1 cut(s) 83
HpyAV CCTTC 4 cut(s) 171, 275, 595, 622
HpyCH4III ACNGT 6 cut(s) 83, 340, 643, 654, 940, 991
HpyCH4IV ACGT 1 cut(s) 1130
HpyCH4V TGCA 7 cut(s) 86, 368, 582, 635, 665, 833, 908
HpyF10VI GCNNNNNNNGC 4 cut(s) 166, 551, 899, 908
HpyF3I CTNAG 4 cut(s) 165, 881, 927, 1015
HpySE526I ACGT 1 cut(s) 1130
Hsp92I GRCGYC 1 cut(s) 381
Hsp92II CATG 5 cut(s) 31, 98, 147, 520, 844
HspAI GCGC 4 cut(s) 150, 297, 381, 931
KasI GGCGCC 1 cut(s) 380
Kzo9I GATC 4 cut(s) 42, 314, 497, 1045
LmnI GCTCC 5 cut(s) 304, 542, 983, 1021, 1154
Lsp1109I GCAGC 4 cut(s) 647, 677, 920, 1036
LweI GCATC 3 cut(s) 147, 622, 687
MaeI CTAG 4 cut(s) 546, 729, 872, 1049
MaeII ACGT 1 cut(s) 1130
MaeIII GTNAC 3 cut(s) 208, 334, 760
MalI GATC 4 cut(s) 44, 316, 499, 1047
MboI GATC 4 cut(s) 42, 314, 497, 1045
MflI RGATCY 1 cut(s) 1045
MhlI GDGCHC 4 cut(s) 171, 650, 980, 1063
MlsI TGGCCA 1 cut(s) 327
MluCI AATT 7 cut(s) 124, 351, 592, 835, 995, 1122, 1141
MluNI TGGCCA 1 cut(s) 327
Mly113I GGCGCC 1 cut(s) 381
MlyI GAGTC 3 cut(s) 239, 400, 781
MmeI TCCRAC 1 cut(s) 477
Mox20I TGGCCA 1 cut(s) 327
MscI TGGCCA 1 cut(s) 327
MslI CAYNNNNRTG 1 cut(s) 587
Msp20I TGGCCA 1 cut(s) 327
MspA1I CMGCKG 1 cut(s) 668
MspI CCGG 2 cut(s) 402, 1174
MspR9I CCNGG 3 cut(s) 237, 403, 683
MvaI CCWGG 2 cut(s) 237, 683
MvnI CGCG 1 cut(s) 888
MwoI GCNNNNNNNGC 4 cut(s) 166, 551, 899, 908
NarI GGCGCC 1 cut(s) 381
NciI CCSGG 1 cut(s) 403
NdeII GATC 4 cut(s) 42, 314, 497, 1045
NlaIII CATG 5 cut(s) 31, 98, 147, 520, 844
NlaIV GGNNCC 1 cut(s) 382
NmuCI GTSAC 2 cut(s) 208, 760
NspI RCATGY 2 cut(s) 98, 520
NspV TTCGAA 1 cut(s) 1166
PaeI GCATGC 1 cut(s) 98
PciI ACATGT 1 cut(s) 516
PcsI WCGNNNNNNNCGW 1 cut(s) 1136
PfeI GAWTC 6 cut(s) 49, 225, 272, 510, 724, 950
PfoI TCCNGGA 2 cut(s) 401, 681
PinAI ACCGGT 1 cut(s) 1173
PkrI GCNGC 6 cut(s) 637, 667, 887, 910, 917, 1026
PleI GAGTC 3 cut(s) 238, 400, 780
PluTI GGCGCC 1 cut(s) 384
PpsI GAGTC 3 cut(s) 238, 400, 780
PpuMI RGGWCCY 1 cut(s) 783
PscI ACATGT 1 cut(s) 516
Psp124BI GAGCTC 1 cut(s) 980
Psp5II RGGWCCY 1 cut(s) 783
Psp6I CCWGG 2 cut(s) 235, 681
PspGI CCWGG 2 cut(s) 235, 681
PspN4I GGNNCC 1 cut(s) 382
PspPI GGNCC 1 cut(s) 783
PspPPI RGGWCCY 1 cut(s) 783
PstNI CAGNNNCTG 2 cut(s) 323, 641
PsuI RGATCY 1 cut(s) 1045
PvuII CAGCTG 1 cut(s) 668
RsaI GTAC 2 cut(s) 570, 1161
RsaNI GTAC 2 cut(s) 569, 1160
RseI CAYNNNNRTG 1 cut(s) 587
SacI GAGCTC 1 cut(s) 980
SatI GCNGC 6 cut(s) 636, 666, 886, 909, 916, 1025
Sau3AI GATC 4 cut(s) 42, 314, 497, 1045
Sau96I GGNCC 1 cut(s) 783
ScaI AGTACT 1 cut(s) 1161
SchI GAGTC 3 cut(s) 239, 400, 781
ScrFI CCNGG 3 cut(s) 237, 403, 683
SduI GDGCHC 4 cut(s) 171, 650, 980, 1063
SfaNI GCATC 3 cut(s) 147, 622, 687
SfcI CTRYAG 1 cut(s) 939
SfoI GGCGCC 1 cut(s) 382
SfuI TTCGAA 1 cut(s) 1166
SinI GGWCC 1 cut(s) 783
SmiMI CAYNNNNRTG 1 cut(s) 587
SmlI CTYRAG 1 cut(s) 281
SmoI CTYRAG 1 cut(s) 281
SphI GCATGC 1 cut(s) 98
Sse9I AATT 7 cut(s) 124, 351, 592, 835, 995, 1122, 1141
SsiI CCGC 4 cut(s) 413, 564, 886, 916
SspDI GGCGCC 1 cut(s) 380
SspI AATATT 1 cut(s) 718
SspMI CTAG 4 cut(s) 546, 729, 872, 1049
SstI GAGCTC 1 cut(s) 980
StyD4I CCNGG 3 cut(s) 235, 401, 681
StyI CCWWGG 1 cut(s) 859
TaaI ACNGT 6 cut(s) 83, 340, 643, 654, 940, 991
TaiI ACGT 1 cut(s) 1133
TaqI TCGA 5 cut(s) 47, 228, 270, 1139, 1166
TasI AATT 7 cut(s) 124, 351, 592, 835, 995, 1122, 1141
TatI WGTACW 1 cut(s) 1159
TauI GCSGC 2 cut(s) 888, 918
TfiI GAWTC 6 cut(s) 49, 225, 272, 510, 724, 950
TscAI CASTG 8 cut(s) 191, 204, 324, 363, 487, 646, 782, 1140
TseFI GTSAC 2 cut(s) 208, 760
TseI GCWGC 4 cut(s) 635, 665, 908, 1024
Tsp45I GTSAC 2 cut(s) 208, 760
TspDTI ATGAA 6 cut(s) 16, 132, 605, 641, 829, 1056
TspGWI ACGGA 1 cut(s) 992
TspRI CASTG 8 cut(s) 191, 204, 324, 363, 487, 646, 782, 1140
VpaK11BI GGWCC 1 cut(s) 783
XapI RAATTY 3 cut(s) 835, 995, 1122
XbaI TCTAGA 1 cut(s) 1048
XceI RCATGY 2 cut(s) 98, 520
XspI CTAG 4 cut(s) 546, 729, 872, 1049
ZrmI AGTACT 1 cut(s) 1161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.