Rh2CG422600

Survival protein SurE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0002356
Physical Location & Seq
Forward (+)
57702957 .. 57709563
6607 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG422600.1

Sequence Viewer

Length: 801 bp
ATGAGTTCAACATCTGTGAAACCCAACATGCTGCCTGCGGGCCTGGTCTCCAATCTCCAAGACGTGTTGAGCAAAAGAGGTGGAGGTGACCAACCCACTGAGCCTTCAACTTCTGAAGCTGCAGAGGACCCTGTTGATAGTTCCAAGCCCATCGTTTTGGTCACCAATGGTGATGGGATTGACTCCCCTGGTCTTACTTACCTTGTTGAAGCTCTCGTCCGCCAAGGCCTTTACAATGTCCTTGTCTGCGCTCCTCAATCGGACAAATCAGTATCCGGTCATTCCGTGACTCTCCGAGAAACGGTTTCTGTTAGTTCTGCTGAGATAAATGGTGCCACAGCTTATGAAGTTGCAGGTACTCCCGTAGATTGTGTCTCATTAGCGTTATCTGGCGCACTGTTTTCTTGGTCAAAACCTCTGCTGGTAATCAGTGGAATCAACCGGGGATCAAACTGTGGCCATCACATGTTGTACTCAGGTGTTGTTGCTGGAGCTAGGGAGGCACTAATAAGTGGAGTGCCCTCTTTATCAATATCACTAAATTGGAGGAAGGATGAAAGTCAAGAAAATGATTTCAAAGATGCAGTTGCTGTTTGTTTACCTCTAATAAATGCAGCAATCAGGGATATTGAGAAGGGGGAATTCCCCAAGAGTTGCTTTCTGAATATAGAGATTCCTTCATCTCCTTTATCAAACAAGGTTTGTGTTTCTGAACAATTGTTGAATTGTTTGGCCTGGAATAACGTTATTGATTTGCATATGACCTGGTTCTGGTTCTGTTTTTTTATTTTTTTTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko00760 ko01100 ko01110 map00230 map00240 map00760 map01100 map01110
Pfam Domains
Protein Families
SurE

Protein Analysis

266

Amino Acids

28.44

Weight (kDa)

4.81

Isoelectric Point (pI)

41.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SurE PF01975 52 - 232 4.4e-50 Survival protein SurE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 344
AccB1I GGYRCC 1 cut(s) 332
AciI CCGC 2 cut(s) 38, 220
AclI AACGTT 1 cut(s) 744
AclWI GGATC 1 cut(s) 454
AcoI YGGCCR 1 cut(s) 457
AcsI RAATTY 1 cut(s) 641
AcuI CTGAAG 1 cut(s) 135
AfaI GTAC 2 cut(s) 358, 473
AfiI CCNNNNNNNGG 2 cut(s) 301, 771
AflIII ACRYGT 2 cut(s) 63, 465
AgsI TTSAA 5 cut(s) 9, 108, 209, 577, 724
AjiI CACGTC 1 cut(s) 64
AjnI CCWGG 4 cut(s) 42, 187, 734, 764
AluBI AGCT 4 cut(s) 119, 212, 341, 494
AluI AGCT 4 cut(s) 119, 212, 341, 494
Alw26I GTCTC 2 cut(s) 52, 379
AlwI GGATC 1 cut(s) 454
AlwNI CAGNNNCTG 1 cut(s) 590
AoxI GGCC 4 cut(s) 40, 226, 457, 732
ApeKI GCWGC 3 cut(s) 31, 119, 614
ApoI RAATTY 1 cut(s) 641
AspLEI GCGC 2 cut(s) 251, 395
AspS9I GGNCC 2 cut(s) 40, 127
AsuC2I CCSGG 1 cut(s) 443
AsuHPI GGTGA 3 cut(s) 98, 154, 182
AvaII GGWCC 1 cut(s) 127
BaeGI GKGCMC 1 cut(s) 522
BaeI ACNNNNGTAYC 2 cut(s) 348, 381
BalI TGGCCA 1 cut(s) 459
BanI GGYRCC 1 cut(s) 332
BbvI GCAGC 3 cut(s) 18, 106, 626
BccI CCATC 3 cut(s) 158, 167, 468
BciT130I CCWGG 4 cut(s) 44, 189, 736, 766
BciVI GTATCC 1 cut(s) 283
BcnI CCSGG 1 cut(s) 443
BcoDI GTCTC 2 cut(s) 52, 379
BfaI CTAG 1 cut(s) 495
BfmI CTRYAG 1 cut(s) 120
BfuAI ACCTGC 1 cut(s) 344
BfuI GTATCC 1 cut(s) 283
BisI GCNGC 3 cut(s) 32, 120, 615
BlsI GCNGC 3 cut(s) 33, 121, 616
Bme1390I CCNGG 5 cut(s) 44, 189, 443, 736, 766
Bme18I GGWCC 1 cut(s) 127
BmgBI CACGTC 1 cut(s) 64
BmgT120I GGNCC 2 cut(s) 40, 127
BmiI GGNNCC 2 cut(s) 129, 334
BmrFI CCNGG 5 cut(s) 44, 189, 443, 736, 766
BmsI GCATC 1 cut(s) 571
BpmI CTGGAG 1 cut(s) 510
BpuMI CCSGG 1 cut(s) 443
BsaI GGTCTC 1 cut(s) 52
BsaJI CCNNGG 3 cut(s) 187, 223, 442
BsaWI WCCGGW 1 cut(s) 275
Bsc4I CCNNNNNNNGG 2 cut(s) 301, 771
BseBI CCWGG 4 cut(s) 44, 189, 736, 766
BseDI CCNNGG 3 cut(s) 187, 223, 442
BseGI GGATG 1 cut(s) 559
BseLI CCNNNNNNNGG 2 cut(s) 301, 771
BseMII CTCAG 3 cut(s) 90, 312, 489
BseRI GAGGAG 1 cut(s) 243
BseSI GKGCMC 1 cut(s) 522
BseXI GCAGC 3 cut(s) 18, 106, 626
BshFI GGCC 4 cut(s) 42, 228, 459, 734
BshNI GGYRCC 1 cut(s) 332
BsiSI CCGG 2 cut(s) 276, 442
BslI CCNNNNNNNGG 2 cut(s) 301, 771
BsmAI GTCTC 2 cut(s) 52, 379
BsnI GGCC 4 cut(s) 42, 228, 459, 734
Bso31I GGTCTC 1 cut(s) 52
Bsp1286I GDGCHC 1 cut(s) 522
Bsp143I GATC 1 cut(s) 446
BspACI CCGC 2 cut(s) 38, 220
BspANI GGCC 4 cut(s) 42, 228, 459, 734
BspCNI CTCAG 3 cut(s) 91, 313, 488
BspLI GGNNCC 2 cut(s) 129, 334
BspMAI CTGCAG 1 cut(s) 124
BspMI ACCTGC 1 cut(s) 344
BspPI GGATC 1 cut(s) 454
BspT107I GGYRCC 1 cut(s) 332
BspTNI GGTCTC 1 cut(s) 52
BssECI CCNNGG 3 cut(s) 187, 223, 442
BssMI GATC 1 cut(s) 446
BssT1I CCWWGG 1 cut(s) 223
Bst2UI CCWGG 4 cut(s) 44, 189, 736, 766
Bst4CI ACNGT 3 cut(s) 304, 399, 455
BstC8I GCNNGC 2 cut(s) 36, 40
BstDEI CTNAG 3 cut(s) 99, 321, 475
BstEII GGTNACC 2 cut(s) 86, 160
BstF5I GGATG 1 cut(s) 559
BstHHI GCGC 2 cut(s) 251, 395
BstKTI GATC 1 cut(s) 449
BstMAI GTCTC 2 cut(s) 52, 379
BstMBI GATC 1 cut(s) 446
BstMWI GCNNNNNNNGC 1 cut(s) 500
BstNI CCWGG 4 cut(s) 44, 189, 736, 766
BstNSI RCATGY 2 cut(s) 31, 469
BstPI GGTNACC 2 cut(s) 86, 160
BstSCI CCNGG 5 cut(s) 42, 187, 441, 734, 764
BstSFI CTRYAG 1 cut(s) 120
BstSLI GKGCMC 1 cut(s) 522
BstV1I GCAGC 3 cut(s) 18, 106, 626
BstXI CCANNNNNNTGG 1 cut(s) 157
BsuI GTATCC 1 cut(s) 283
BsuRI GGCC 4 cut(s) 42, 228, 459, 734
BtrI CACGTC 1 cut(s) 64
BtsCI GGATG 1 cut(s) 559
BtsIMutI CAGTG 3 cut(s) 96, 395, 436
BveI ACCTGC 1 cut(s) 344
Cac8I GCNNGC 2 cut(s) 36, 40
CaiI CAGNNNCTG 1 cut(s) 590
CfoI GCGC 2 cut(s) 251, 395
Cfr13I GGNCC 2 cut(s) 40, 127
CsiI ACCWGGT 1 cut(s) 764
Csp6I GTAC 2 cut(s) 357, 472
CspCI CAANNNNNGTGG 2 cut(s) 61, 96
CviAII CATG 2 cut(s) 28, 466
CviQI GTAC 2 cut(s) 357, 472
DdeI CTNAG 3 cut(s) 99, 321, 475
DpnI GATC 1 cut(s) 448
DpnII GATC 1 cut(s) 446
EaeI YGGCCR 1 cut(s) 457
EciI GGCGGA 1 cut(s) 209
Eco130I CCWWGG 1 cut(s) 223
Eco147I AGGCCT 1 cut(s) 228
Eco31I GGTCTC 1 cut(s) 52
Eco47I GGWCC 1 cut(s) 127
Eco57I CTGAAG 1 cut(s) 135
Eco91I GGTNACC 2 cut(s) 86, 160
EcoO109I RGGNCCY 1 cut(s) 127
EcoO65I GGTNACC 2 cut(s) 86, 160
EcoRI GAATTC 1 cut(s) 641
EcoRII CCWGG 4 cut(s) 42, 187, 734, 764
EcoT14I CCWWGG 1 cut(s) 223
ErhI CCWWGG 1 cut(s) 223
FaeI CATG 2 cut(s) 31, 469
FaiI YATR 6 cut(s) 29, 345, 467, 668, 759, 761
FalI AAGNNNNNCTT 2 cut(s) 641, 673
FatI CATG 2 cut(s) 27, 465
FauI CCCGC 1 cut(s) 31
FauNDI CATATG 1 cut(s) 759
Fnu4HI GCNGC 3 cut(s) 32, 120, 615
FokI GGATG 1 cut(s) 566
Fsp4HI GCNGC 3 cut(s) 32, 120, 615
FspBI CTAG 1 cut(s) 495
GlaI GCGC 2 cut(s) 250, 394
GluI GCNGC 3 cut(s) 32, 120, 615
GsuI CTGGAG 1 cut(s) 510
HaeIII GGCC 4 cut(s) 42, 228, 459, 734
HapII CCGG 2 cut(s) 276, 442
HhaI GCGC 2 cut(s) 251, 395
Hin1II CATG 2 cut(s) 31, 469
Hin6I GCGC 2 cut(s) 249, 393
HinP1I GCGC 2 cut(s) 249, 393
HinfI GANTC 4 cut(s) 182, 289, 435, 673
HpaII CCGG 2 cut(s) 276, 442
HphI GGTGA 3 cut(s) 98, 154, 182
Hpy166II GTNNAC 1 cut(s) 599
Hpy188I TCNGA 5 cut(s) 115, 262, 296, 663, 712
Hpy188III TCNNGA 1 cut(s) 563
Hpy8I GTNNAC 1 cut(s) 599
HpyAV CCTTC 4 cut(s) 114, 544, 628, 687
HpyCH4III ACNGT 3 cut(s) 304, 399, 455
HpyCH4IV ACGT 2 cut(s) 63, 744
HpyCH4V TGCA 5 cut(s) 122, 353, 584, 614, 757
HpyF10VI GCNNNNNNNGC 1 cut(s) 500
HpyF3I CTNAG 3 cut(s) 99, 321, 475
HpySE526I ACGT 2 cut(s) 63, 744
Hsp92II CATG 2 cut(s) 31, 469
HspAI GCGC 2 cut(s) 249, 393
Kzo9I GATC 1 cut(s) 446
LmnI GCTCC 2 cut(s) 256, 491
Lsp1109I GCAGC 3 cut(s) 18, 106, 626
LweI GCATC 1 cut(s) 571
MabI ACCWGGT 1 cut(s) 764
MaeI CTAG 1 cut(s) 495
MaeII ACGT 2 cut(s) 63, 744
MaeIII GTNAC 3 cut(s) 86, 160, 286
MalI GATC 1 cut(s) 448
MboI GATC 1 cut(s) 446
MfeI CAATTG 1 cut(s) 716
MhlI GDGCHC 1 cut(s) 522
MlsI TGGCCA 1 cut(s) 459
MluCI AATT 4 cut(s) 541, 641, 716, 724
MluNI TGGCCA 1 cut(s) 459
MlyI GAGTC 2 cut(s) 176, 283
MnlI CCTC 9 cut(s) 71, 77, 118, 264, 426, 493, 532, 540, 612
Mox20I TGGCCA 1 cut(s) 459
MscI TGGCCA 1 cut(s) 459
Msp20I TGGCCA 1 cut(s) 459
MspI CCGG 2 cut(s) 276, 442
MspR9I CCNGG 5 cut(s) 44, 189, 443, 736, 766
MunI CAATTG 1 cut(s) 716
MvaI CCWGG 4 cut(s) 44, 189, 736, 766
MwoI GCNNNNNNNGC 1 cut(s) 500
NciI CCSGG 1 cut(s) 443
NdeI CATATG 1 cut(s) 759
NdeII GATC 1 cut(s) 446
NlaIII CATG 2 cut(s) 31, 469
NlaIV GGNNCC 2 cut(s) 129, 334
NmuCI GTSAC 3 cut(s) 86, 160, 286
NspI RCATGY 2 cut(s) 31, 469
PceI AGGCCT 1 cut(s) 228
PciI ACATGT 1 cut(s) 465
PfeI GAWTC 2 cut(s) 435, 673
PkrI GCNGC 3 cut(s) 33, 121, 616
PleI GAGTC 2 cut(s) 176, 283
PpsI GAGTC 2 cut(s) 176, 283
PpuMI RGGWCCY 1 cut(s) 127
PscI ACATGT 1 cut(s) 465
Psp1406I AACGTT 1 cut(s) 744
Psp5II RGGWCCY 1 cut(s) 127
Psp6I CCWGG 4 cut(s) 42, 187, 734, 764
PspEI GGTNACC 2 cut(s) 86, 160
PspGI CCWGG 4 cut(s) 42, 187, 734, 764
PspN4I GGNNCC 2 cut(s) 129, 334
PspPI GGNCC 2 cut(s) 40, 127
PspPPI RGGWCCY 1 cut(s) 127
PstI CTGCAG 1 cut(s) 124
PstNI CAGNNNCTG 1 cut(s) 590
RsaI GTAC 2 cut(s) 358, 473
RsaNI GTAC 2 cut(s) 357, 472
SatI GCNGC 3 cut(s) 32, 120, 615
Sau3AI GATC 1 cut(s) 446
Sau96I GGNCC 2 cut(s) 40, 127
SchI GAGTC 2 cut(s) 176, 283
ScrFI CCNGG 5 cut(s) 44, 189, 443, 736, 766
SduI GDGCHC 1 cut(s) 522
SexAI ACCWGGT 1 cut(s) 764
SfaNI GCATC 1 cut(s) 571
SfcI CTRYAG 1 cut(s) 120
SinI GGWCC 1 cut(s) 127
Sse9I AATT 4 cut(s) 541, 641, 716, 724
SseBI AGGCCT 1 cut(s) 228
SsiI CCGC 2 cut(s) 38, 220
SspMI CTAG 1 cut(s) 495
StuI AGGCCT 1 cut(s) 228
StyD4I CCNGG 5 cut(s) 42, 187, 441, 734, 764
StyI CCWWGG 1 cut(s) 223
TaaI ACNGT 3 cut(s) 304, 399, 455
TaiI ACGT 2 cut(s) 66, 747
TasI AATT 4 cut(s) 541, 641, 716, 724
TatI WGTACW 1 cut(s) 471
TfiI GAWTC 2 cut(s) 435, 673
TscAI CASTG 3 cut(s) 103, 402, 436
TseFI GTSAC 3 cut(s) 86, 160, 286
TseI GCWGC 3 cut(s) 31, 119, 614
Tsp45I GTSAC 3 cut(s) 86, 160, 286
TspDTI ATGAA 3 cut(s) 360, 570, 669
TspGWI ACGGA 1 cut(s) 274
TspRI CASTG 3 cut(s) 103, 402, 436
VpaK11BI GGWCC 1 cut(s) 127
XapI RAATTY 1 cut(s) 641
XceI RCATGY 2 cut(s) 31, 469
XspI CTAG 1 cut(s) 495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.