Rh3CG180400

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Forward (+)
15850657 .. 15864918
14262 bp
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UTR
Exon/CDS
Intron
Rh3CG180400.1

Sequence Viewer

Length: 543 bp
ATGGCAGACATGGCTAAGCTATTGGCACTACATGGTGTGGTGGTCACAATTGTAACCACACCCCTTAATGCCATTCGGATCAAACCAATCATAGATCGTGCGATTGATTCTGGTCTCCCTATTCATATGGTGCAGTTCAGTTTGCCACTCCATGAGTTTGGTTTGCCAGAGGGATGTGAAAACTTGGATTCAGTTCCCTCAAGAAACTTGTTTCTGAATTTCTTTGATGCAGTTAGCAAGCTGCATCAGTCAGTAGAACAATTGCTTGAAACAATAAAACCCATTCCAAGCTGCATAATTTCAGATAGAGGTCTTTCATGGGCGGCTGAGATTGCTCAGAAGTTTGGGTTACCAAGGCTTTTGTTTGATGGGACTAATTGCTTTACTCTTTTGTGTACTCATAATATACAAGCACACAAGATCCTAGACAGTGTTTCAGGCTCAGACCCCTTTGTGGTGCCTGGTTTGCCTGATGAGATTGAGCTTACTTCAGCACAATTGCCGGGGCACCTGAATCCTTCGTCAGATGATTTAAGATATTAG

Protein Analysis

180

Amino Acids

19.7

Weight (kDa)

5.2

Isoelectric Point (pI)

39.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 457, 507
AciI CCGC 1 cut(s) 323
AclWI GGATC 2 cut(s) 86, 415
AcsI RAATTY 1 cut(s) 217
AcuI CTGAAG 1 cut(s) 474
AfaI GTAC 1 cut(s) 397
AfiI CCNNNNNNNGG 1 cut(s) 454
AgsI TTSAA 1 cut(s) 269
AjnI CCWGG 1 cut(s) 460
AluBI AGCT 4 cut(s) 19, 241, 291, 484
AluI AGCT 4 cut(s) 19, 241, 291, 484
Alw26I GTCTC 1 cut(s) 119
AlwI GGATC 2 cut(s) 86, 415
ApeKI GCWGC 2 cut(s) 241, 291
ApoI RAATTY 1 cut(s) 217
AsuC2I CCSGG 1 cut(s) 504
BaeGI GKGCMC 1 cut(s) 510
BanI GGYRCC 2 cut(s) 457, 507
BbvI GCAGC 2 cut(s) 228, 278
BccI CCATC 1 cut(s) 362
BciT130I CCWGG 1 cut(s) 462
BcnI CCSGG 1 cut(s) 504
BcoDI GTCTC 1 cut(s) 119
BfaI CTAG 1 cut(s) 425
BisI GCNGC 3 cut(s) 242, 292, 324
BlpI GCTNAGC 1 cut(s) 15
BlsI GCNGC 3 cut(s) 243, 293, 325
Bme1390I CCNGG 2 cut(s) 462, 504
BmiI GGNNCC 2 cut(s) 459, 509
BmrFI CCNGG 2 cut(s) 462, 504
BmsI GCATC 2 cut(s) 217, 253
Bpu1102I GCTNAGC 1 cut(s) 15
BpuEI CTTGAG 1 cut(s) 184
BpuMI CCSGG 1 cut(s) 504
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 2 cut(s) 353, 503
Bsc4I CCNNNNNNNGG 1 cut(s) 454
BseBI CCWGG 1 cut(s) 462
BseDI CCNNGG 2 cut(s) 353, 503
BseGI GGATG 1 cut(s) 179
BseLI CCNNNNNNNGG 1 cut(s) 454
BseMII CTCAG 3 cut(s) 318, 350, 456
BseSI GKGCMC 1 cut(s) 510
BseXI GCAGC 2 cut(s) 228, 278
BsgI GTGCAG 1 cut(s) 152
BshNI GGYRCC 2 cut(s) 457, 507
BsiSI CCGG 1 cut(s) 503
BslFI GGGAC 1 cut(s) 385
BslI CCNNNNNNNGG 1 cut(s) 454
BsmAI GTCTC 1 cut(s) 119
BsmFI GGGAC 1 cut(s) 385
Bso31I GGTCTC 1 cut(s) 119
Bsp1286I GDGCHC 1 cut(s) 510
Bsp143I GATC 3 cut(s) 78, 94, 420
Bsp1720I GCTNAGC 1 cut(s) 15
BspACI CCGC 1 cut(s) 323
BspCNI CTCAG 3 cut(s) 319, 349, 455
BspLI GGNNCC 2 cut(s) 459, 509
BspPI GGATC 2 cut(s) 86, 415
BspT107I GGYRCC 2 cut(s) 457, 507
BspTNI GGTCTC 1 cut(s) 119
BssECI CCNNGG 2 cut(s) 353, 503
BssMI GATC 3 cut(s) 78, 94, 420
BssT1I CCWWGG 1 cut(s) 353
Bst2UI CCWGG 1 cut(s) 462
Bst4CI ACNGT 1 cut(s) 431
BstC8I GCNNGC 1 cut(s) 239
BstDEI CTNAG 4 cut(s) 15, 327, 336, 442
BstEII GGTNACC 1 cut(s) 348
BstF5I GGATG 1 cut(s) 179
BstKTI GATC 3 cut(s) 81, 97, 423
BstMAI GTCTC 1 cut(s) 119
BstMBI GATC 3 cut(s) 78, 94, 420
BstMWI GCNNNNNNNGC 3 cut(s) 11, 332, 466
BstNI CCWGG 1 cut(s) 462
BstPI GGTNACC 1 cut(s) 348
BstSCI CCNGG 2 cut(s) 460, 502
BstSLI GKGCMC 1 cut(s) 510
BstV1I GCAGC 2 cut(s) 228, 278
BstX2I RGATCY 1 cut(s) 420
BstXI CCANNNNNNTGG 1 cut(s) 158
BstYI RGATCY 1 cut(s) 420
BtsCI GGATG 1 cut(s) 179
BtsIMutI CAGTG 1 cut(s) 436
Cac8I GCNNGC 1 cut(s) 239
Csp6I GTAC 1 cut(s) 396
CviAII CATG 4 cut(s) 10, 32, 152, 318
CviJI RGCY 8 cut(s) 14, 19, 241, 291, 326, 358, 441, 484
CviKI_1 RGCY 8 cut(s) 14, 19, 241, 291, 326, 358, 441, 484
CviQI GTAC 1 cut(s) 396
DdeI CTNAG 4 cut(s) 15, 327, 336, 442
DpnI GATC 3 cut(s) 80, 96, 422
DpnII GATC 3 cut(s) 78, 94, 420
Eco130I CCWWGG 1 cut(s) 353
Eco31I GGTCTC 1 cut(s) 119
Eco57I CTGAAG 1 cut(s) 474
Eco91I GGTNACC 1 cut(s) 348
EcoO65I GGTNACC 1 cut(s) 348
EcoRII CCWGG 1 cut(s) 460
EcoT14I CCWWGG 1 cut(s) 353
ErhI CCWWGG 1 cut(s) 353
FaeI CATG 4 cut(s) 13, 35, 155, 321
FaqI GGGAC 1 cut(s) 385
FatI CATG 4 cut(s) 9, 31, 151, 317
FauNDI CATATG 1 cut(s) 126
Fnu4HI GCNGC 3 cut(s) 242, 292, 324
FokI GGATG 1 cut(s) 186
Fsp4HI GCNGC 3 cut(s) 242, 292, 324
FspBI CTAG 1 cut(s) 425
GluI GCNGC 3 cut(s) 242, 292, 324
HapII CCGG 1 cut(s) 503
Hin1II CATG 4 cut(s) 13, 35, 155, 321
HinfI GANTC 3 cut(s) 107, 188, 514
HpaII CCGG 1 cut(s) 503
Hpy166II GTNNAC 1 cut(s) 396
Hpy188I TCNGA 6 cut(s) 78, 216, 304, 339, 445, 526
Hpy188III TCNNGA 1 cut(s) 201
Hpy8I GTNNAC 1 cut(s) 396
HpyAV CCTTC 1 cut(s) 528
HpyCH4III ACNGT 1 cut(s) 431
HpyCH4V TGCA 4 cut(s) 133, 230, 244, 294
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 332, 466
HpyF3I CTNAG 4 cut(s) 15, 327, 336, 442
Hsp92II CATG 4 cut(s) 13, 35, 155, 321
Kzo9I GATC 3 cut(s) 78, 94, 420
LpnPI CCDG 8 cut(s) 96, 180, 423, 447, 474, 483, 516, 524
Lsp1109I GCAGC 2 cut(s) 228, 278
LweI GCATC 2 cut(s) 217, 253
MaeI CTAG 1 cut(s) 425
MaeIII GTNAC 3 cut(s) 43, 52, 348
MalI GATC 3 cut(s) 80, 96, 422
MboI GATC 3 cut(s) 78, 94, 420
MfeI CAATTG 3 cut(s) 48, 260, 497
MflI RGATCY 1 cut(s) 420
MhlI GDGCHC 1 cut(s) 510
MluCI AATT 6 cut(s) 48, 217, 260, 297, 376, 497
MnlI CCTC 3 cut(s) 163, 208, 302
MseI TTAA 2 cut(s) 66, 533
MspI CCGG 1 cut(s) 503
MspR9I CCNGG 2 cut(s) 462, 504
MunI CAATTG 3 cut(s) 48, 260, 497
MvaI CCWGG 1 cut(s) 462
MwoI GCNNNNNNNGC 3 cut(s) 11, 332, 466
NciI CCSGG 1 cut(s) 504
NdeI CATATG 1 cut(s) 126
NdeII GATC 3 cut(s) 78, 94, 420
NlaIII CATG 4 cut(s) 13, 35, 155, 321
NlaIV GGNNCC 2 cut(s) 459, 509
NmuCI GTSAC 1 cut(s) 43
PfeI GAWTC 3 cut(s) 107, 188, 514
PkrI GCNGC 3 cut(s) 243, 293, 325
Psp6I CCWGG 1 cut(s) 460
PspEI GGTNACC 1 cut(s) 348
PspGI CCWGG 1 cut(s) 460
PspN4I GGNNCC 2 cut(s) 459, 509
PsuI RGATCY 1 cut(s) 420
RsaI GTAC 1 cut(s) 397
RsaNI GTAC 1 cut(s) 396
SaqAI TTAA 2 cut(s) 66, 533
SatI GCNGC 3 cut(s) 242, 292, 324
Sau3AI GATC 3 cut(s) 78, 94, 420
ScrFI CCNGG 2 cut(s) 462, 504
SduI GDGCHC 1 cut(s) 510
SetI ASST 6 cut(s) 21, 243, 293, 313, 486, 513
SfaNI GCATC 2 cut(s) 217, 253
SmlI CTYRAG 1 cut(s) 199
SmoI CTYRAG 1 cut(s) 199
Sse9I AATT 6 cut(s) 48, 217, 260, 297, 376, 497
SsiI CCGC 1 cut(s) 323
SspMI CTAG 1 cut(s) 425
StyD4I CCNGG 2 cut(s) 460, 502
StyI CCWWGG 1 cut(s) 353
TaaI ACNGT 1 cut(s) 431
TasI AATT 6 cut(s) 48, 217, 260, 297, 376, 497
TatI WGTACW 1 cut(s) 395
TauI GCSGC 1 cut(s) 326
TfiI GAWTC 3 cut(s) 107, 188, 514
Tru1I TTAA 2 cut(s) 66, 533
Tru9I TTAA 2 cut(s) 66, 533
TscAI CASTG 1 cut(s) 436
TseFI GTSAC 1 cut(s) 43
TseI GCWGC 2 cut(s) 241, 291
Tsp45I GTSAC 1 cut(s) 43
TspDTI ATGAA 2 cut(s) 113, 306
TspRI CASTG 1 cut(s) 436
XapI RAATTY 1 cut(s) 217
XspI CTAG 1 cut(s) 425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.