Rh3DG155600

Glutathione S-transferase, N-terminal domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Reverse (-)
13378038 .. 13379813
1776 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG155600.1

Sequence Viewer

Length: 564 bp
ATGATAGATTTTGCTTCGTATAGGTTGGGTACTGTTCTTTTGTGGATTTGTGTTTCGTTGTGTTTGTGTATTTTATTTCAGGAGGGAGAGAAGCCTGATTGTATCATTACTCCGAAACTGAATGTTGGGGGTAAGCTTCGGGCTGATGCCAGCAATGGAAACACTAATGTATTCATGAATGGTAGAGAGATCACAAAGATTGAGCTTAGGGTGCTCAAGGTTGAAGATGAATTGTCAAAGTTGGAGCAGCTCAAGTCAATTAAGCTCAAAGAAATCCTTCTGAAAAAGAAGTTGGAACTGGAGGAGGTATGCAGACAGTCTCACATGGTTACAGAAATACTGAGTGCTGCAGAATACTCAAATGAAGCTATAGAGGCCTACCCTTTTTGCAGGAGGGTTCGCGAAGCTCTGACTGAGCTAGATCTTTTAGCAGAGGTGTATCCTTGCCCAAAAGGTTCGATAAGACACAGAGAATTGGTTAACAGATCTGGTGGAAAAGAGCAATTTCCTTTTCTCATTGATCCAAATACCGGTATTTCAATGTATGAAAGCGGTAAGTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

187

Amino Acids

21.21

Weight (kDa)

6.21

Isoelectric Point (pI)

33.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MAP65_ASE1 PF03999 73 - 134 1.1e-06 Microtubule associated protein (MAP65/ASE1 family)
GST_N_3 PF13417 128 - 185 3.6e-09 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 402
AciI CCGC 1 cut(s) 552
AclWI GGATC 1 cut(s) 515
AfaI GTAC 1 cut(s) 31
AfiI CCNNNNNNNGG 1 cut(s) 530
AgeI ACCGGT 1 cut(s) 530
AgsI TTSAA 2 cut(s) 224, 540
AjuI GAANNNNNNNTTGG 2 cut(s) 275, 307
AluBI AGCT 7 cut(s) 136, 205, 250, 265, 368, 407, 418
AluI AGCT 7 cut(s) 136, 205, 250, 265, 368, 407, 418
Alw21I GWGCWC 1 cut(s) 216
Alw26I GTCTC 1 cut(s) 324
AlwI GGATC 1 cut(s) 515
AoxI GGCC 1 cut(s) 375
ApeKI GCWGC 2 cut(s) 247, 347
AsiGI ACCGGT 1 cut(s) 530
Asp700I GAANNNNTTC 1 cut(s) 276
Bbv12I GWGCWC 1 cut(s) 216
BbvI GCAGC 2 cut(s) 259, 334
BciVI GTATCC 1 cut(s) 450
BcoDI GTCTC 1 cut(s) 324
BfaI CTAG 1 cut(s) 419
BfmI CTRYAG 2 cut(s) 348, 369
BfuI GTATCC 1 cut(s) 450
BglII AGATCT 2 cut(s) 421, 485
BisI GCNGC 2 cut(s) 248, 348
BlsI GCNGC 2 cut(s) 249, 349
BmsI GCATC 1 cut(s) 136
BpmI CTGGAG 1 cut(s) 320
Bpu10I CCTNAGC 1 cut(s) 206
BpuEI CTTGAG 2 cut(s) 200, 236
BsaWI WCCGGW 1 cut(s) 530
Bsc4I CCNNNNNNNGG 1 cut(s) 530
Bse118I RCCGGY 1 cut(s) 530
Bse1I ACTGG 1 cut(s) 303
Bse3DI GCAATG 1 cut(s) 160
BseLI CCNNNNNNNGG 1 cut(s) 530
BseMI GCAATG 1 cut(s) 160
BseMII CTCAG 2 cut(s) 332, 405
BseNI ACTGG 1 cut(s) 303
BseRI GAGGAG 1 cut(s) 317
BseXI GCAGC 2 cut(s) 259, 334
Bsh1236I CGCG 1 cut(s) 402
BshFI GGCC 1 cut(s) 377
BshTI ACCGGT 1 cut(s) 530
BsiHKAI GWGCWC 1 cut(s) 216
BsiSI CCGG 1 cut(s) 531
BslI CCNNNNNNNGG 1 cut(s) 530
BsmAI GTCTC 1 cut(s) 324
BsnI GGCC 1 cut(s) 377
Bsp1286I GDGCHC 1 cut(s) 216
Bsp143I GATC 4 cut(s) 189, 421, 485, 520
Bsp68I TCGCGA 1 cut(s) 402
BspACI CCGC 1 cut(s) 552
BspANI GGCC 1 cut(s) 377
BspCNI CTCAG 2 cut(s) 333, 406
BspFNI CGCG 1 cut(s) 402
BspHI TCATGA 1 cut(s) 174
BspMAI CTGCAG 1 cut(s) 352
BspPI GGATC 1 cut(s) 515
BsrDI GCAATG 1 cut(s) 160
BsrFI RCCGGY 1 cut(s) 530
BsrI ACTGG 1 cut(s) 303
BssAI RCCGGY 1 cut(s) 530
BssMI GATC 4 cut(s) 189, 421, 485, 520
Bst4CI ACNGT 2 cut(s) 34, 318
BstC8I GCNNGC 1 cut(s) 151
BstDEI CTNAG 3 cut(s) 206, 341, 414
BstFNI CGCG 1 cut(s) 402
BstKTI GATC 4 cut(s) 192, 424, 488, 523
BstMAI GTCTC 1 cut(s) 324
BstMBI GATC 4 cut(s) 189, 421, 485, 520
BstMWI GCNNNNNNNGC 2 cut(s) 211, 374
BstSFI CTRYAG 2 cut(s) 348, 369
BstUI CGCG 1 cut(s) 402
BstV1I GCAGC 2 cut(s) 259, 334
BstX2I RGATCY 2 cut(s) 421, 485
BstYI RGATCY 2 cut(s) 421, 485
BsuI GTATCC 1 cut(s) 450
BsuRI GGCC 1 cut(s) 377
BtuMI TCGCGA 1 cut(s) 402
Cac8I GCNNGC 1 cut(s) 151
CciI TCATGA 1 cut(s) 174
Cfr10I RCCGGY 1 cut(s) 530
Csp6I GTAC 1 cut(s) 30
CspAI ACCGGT 1 cut(s) 530
CviAII CATG 2 cut(s) 175, 325
CviQI GTAC 1 cut(s) 30
DdeI CTNAG 3 cut(s) 206, 341, 414
DpnI GATC 4 cut(s) 191, 423, 487, 522
DpnII GATC 4 cut(s) 189, 421, 485, 520
Eco147I AGGCCT 1 cut(s) 377
FaeI CATG 2 cut(s) 178, 328
FaiI YATR 7 cut(s) 21, 176, 310, 326, 371, 546, 562
FalI AAGNNNNNCTT 2 cut(s) 261, 293
FatI CATG 2 cut(s) 174, 324
Fnu4HI GCNGC 2 cut(s) 248, 348
Fsp4HI GCNGC 2 cut(s) 248, 348
FspBI CTAG 1 cut(s) 419
GluI GCNGC 2 cut(s) 248, 348
GsuI CTGGAG 1 cut(s) 320
HaeIII GGCC 1 cut(s) 377
HapII CCGG 1 cut(s) 531
Hin1II CATG 2 cut(s) 178, 328
HincII GTYRAC 1 cut(s) 481
HindII GTYRAC 1 cut(s) 481
HindIII AAGCTT 1 cut(s) 134
HpaI GTTAAC 1 cut(s) 481
HpaII CCGG 1 cut(s) 531
Hpy166II GTNNAC 1 cut(s) 481
Hpy188I TCNGA 3 cut(s) 114, 282, 411
Hpy188III TCNNGA 3 cut(s) 80, 175, 401
Hpy8I GTNNAC 1 cut(s) 481
HpyAV CCTTC 1 cut(s) 287
HpyCH4III ACNGT 2 cut(s) 34, 318
HpyCH4V TGCA 3 cut(s) 312, 350, 390
HpyF10VI GCNNNNNNNGC 2 cut(s) 211, 374
HpyF3I CTNAG 3 cut(s) 206, 341, 414
Hsp92II CATG 2 cut(s) 178, 328
KspAI GTTAAC 1 cut(s) 481
Kzo9I GATC 4 cut(s) 189, 421, 485, 520
LmnI GCTCC 1 cut(s) 244
LpnPI CCDG 7 cut(s) 65, 108, 163, 284, 376, 474, 544
Lsp1109I GCAGC 2 cut(s) 259, 334
LweI GCATC 1 cut(s) 136
MaeI CTAG 1 cut(s) 419
MaeIII GTNAC 1 cut(s) 328
MalI GATC 4 cut(s) 191, 423, 487, 522
MboI GATC 4 cut(s) 189, 421, 485, 520
MboII GAAGA 1 cut(s) 236
MflI RGATCY 2 cut(s) 421, 485
MhlI GDGCHC 1 cut(s) 216
MluCI AATT 4 cut(s) 230, 258, 473, 503
MmeI TCCRAC 2 cut(s) 222, 273
MnlI CCTC 6 cut(s) 76, 295, 298, 367, 387, 427
MroXI GAANNNNTTC 1 cut(s) 276
MseI TTAA 2 cut(s) 261, 480
MspI CCGG 1 cut(s) 531
MvnI CGCG 1 cut(s) 402
MwoI GCNNNNNNNGC 2 cut(s) 211, 374
NdeII GATC 4 cut(s) 189, 421, 485, 520
NlaIII CATG 2 cut(s) 178, 328
NruI TCGCGA 1 cut(s) 402
PagI TCATGA 1 cut(s) 174
PceI AGGCCT 1 cut(s) 377
PdmI GAANNNNTTC 1 cut(s) 276
PinAI ACCGGT 1 cut(s) 530
PkrI GCNGC 2 cut(s) 249, 349
PstI CTGCAG 1 cut(s) 352
PsuI RGATCY 2 cut(s) 421, 485
RruI TCGCGA 1 cut(s) 402
RsaI GTAC 1 cut(s) 31
RsaNI GTAC 1 cut(s) 30
SaqAI TTAA 2 cut(s) 261, 480
SatI GCNGC 2 cut(s) 248, 348
Sau3AI GATC 4 cut(s) 189, 421, 485, 520
SduI GDGCHC 1 cut(s) 216
SfaNI GCATC 1 cut(s) 136
SfcI CTRYAG 2 cut(s) 348, 369
SmlI CTYRAG 2 cut(s) 215, 251
SmoI CTYRAG 2 cut(s) 215, 251
Sse9I AATT 4 cut(s) 230, 258, 473, 503
SseBI AGGCCT 1 cut(s) 377
SsiI CCGC 1 cut(s) 552
SspMI CTAG 1 cut(s) 419
StuI AGGCCT 1 cut(s) 377
TaaI ACNGT 2 cut(s) 34, 318
TaqI TCGA 1 cut(s) 458
TasI AATT 4 cut(s) 230, 258, 473, 503
Tru1I TTAA 2 cut(s) 261, 480
Tru9I TTAA 2 cut(s) 261, 480
TseI GCWGC 2 cut(s) 247, 347
TspDTI ATGAA 5 cut(s) 163, 191, 243, 378, 561
XmnI GAANNNNTTC 1 cut(s) 276
XspI CTAG 1 cut(s) 419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.