Rw7G026530

FGGY family of carbohydrate kinases, C-terminal domain

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
33761591 .. 33762757
1167 bp
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UTR
Exon/CDS
Intron
Rw7G026530.1

Sequence Viewer

Length: 360 bp
ATGGATTGGGCCCGTTCATGGAAGGCCACACTCTTCTCACTTCTCGGAGACATTCCATCTCATCTTCGTAAACTGATTGCTTCCATTGCCATTGATGGGACTTCTGCAACTACTCTCATTGTTGACAGGTTCATTCGCAGCTACACCAAGGACTGGAAATTCAAGTTACAAGTATTTTTATCTTATAACAAATTGCTATTTTTTTTTCTTTTTCTTTTTACTGTATCTACAAACCGTTTTTGTCTTCATATGGTTTATTTAAGAGACTTTAATCTTGTTCTTTTCTTTTGCTATTGTACATGGAGAAGTTTAGGCCATATGTCCCCTTCTCCCTACTCTTTGTACTGTTTTTATCAATAA

Protein Analysis

119

Amino Acids

14.22

Weight (kDa)

9.47

Isoelectric Point (pI)

37.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 186
AccB7I CCANNNNNTGG 1 cut(s) 153
AcsI RAATTY 1 cut(s) 158
AfaI GTAC 2 cut(s) 298, 344
AfiI CCNNNNNNNGG 3 cut(s) 18, 96, 153
AgsI TTSAA 1 cut(s) 163
AluBI AGCT 1 cut(s) 141
AluI AGCT 1 cut(s) 141
Alw26I GTCTC 2 cut(s) 42, 258
AoxI GGCC 3 cut(s) 9, 24, 313
ApaI GGGCCC 1 cut(s) 13
ApeKI GCWGC 1 cut(s) 138
ApoI RAATTY 1 cut(s) 158
AspS9I GGNCC 2 cut(s) 9, 10
BaeGI GKGCMC 1 cut(s) 13
BanII GRGCYC 1 cut(s) 13
BbsI GAAGAC 1 cut(s) 236
BbvI GCAGC 1 cut(s) 150
BccI CCATC 2 cut(s) 64, 89
BcoDI GTCTC 2 cut(s) 42, 258
BisI GCNGC 1 cut(s) 139
BlsI GCNGC 1 cut(s) 140
BmgT120I GGNCC 2 cut(s) 9, 10
BmiI GGNNCC 1 cut(s) 11
BpiI GAAGAC 1 cut(s) 236
BsaJI CCNNGG 1 cut(s) 147
Bsc4I CCNNNNNNNGG 3 cut(s) 18, 96, 153
Bse1I ACTGG 1 cut(s) 158
Bse3DI GCAATG 1 cut(s) 84
BseDI CCNNGG 1 cut(s) 147
BseLI CCNNNNNNNGG 3 cut(s) 18, 96, 153
BseMI GCAATG 1 cut(s) 84
BseNI ACTGG 1 cut(s) 158
BseSI GKGCMC 1 cut(s) 13
BseXI GCAGC 1 cut(s) 150
BshFI GGCC 3 cut(s) 11, 26, 315
BslFI GGGAC 2 cut(s) 112, 307
BslI CCNNNNNNNGG 3 cut(s) 18, 96, 153
BsmAI GTCTC 2 cut(s) 42, 258
BsmFI GGGAC 2 cut(s) 112, 307
BsnI GGCC 3 cut(s) 11, 26, 315
Bsp120I GGGCCC 1 cut(s) 9
Bsp1286I GDGCHC 1 cut(s) 13
Bsp1407I TGTACA 1 cut(s) 296
BspANI GGCC 3 cut(s) 11, 26, 315
BspLI GGNNCC 1 cut(s) 11
BsrDI GCAATG 1 cut(s) 84
BsrGI TGTACA 1 cut(s) 296
BsrI ACTGG 1 cut(s) 158
BssECI CCNNGG 1 cut(s) 147
BssT1I CCWWGG 1 cut(s) 147
Bst4CI ACNGT 3 cut(s) 223, 236, 347
Bst6I CTCTTC 1 cut(s) 38
BstAUI TGTACA 1 cut(s) 296
BstMAI GTCTC 2 cut(s) 42, 258
BstMWI GCNNNNNNNGC 1 cut(s) 86
BstSLI GKGCMC 1 cut(s) 13
BstV1I GCAGC 1 cut(s) 150
BstV2I GAAGAC 1 cut(s) 236
BsuRI GGCC 3 cut(s) 11, 26, 315
Cfr13I GGNCC 2 cut(s) 9, 10
Csp6I GTAC 2 cut(s) 297, 343
CviAII CATG 2 cut(s) 18, 300
CviJI RGCY 4 cut(s) 11, 26, 141, 315
CviKI_1 RGCY 4 cut(s) 11, 26, 141, 315
CviQI GTAC 2 cut(s) 297, 343
Eam1104I CTCTTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 38
Eco130I CCWWGG 1 cut(s) 147
Eco24I GRGCYC 1 cut(s) 13
EcoT14I CCWWGG 1 cut(s) 147
EcoT38I GRGCYC 1 cut(s) 13
ErhI CCWWGG 1 cut(s) 147
FaeI CATG 2 cut(s) 21, 303
FaiI YATR 7 cut(s) 19, 186, 249, 251, 301, 318, 320
FaqI GGGAC 2 cut(s) 112, 307
FatI CATG 2 cut(s) 17, 299
FauNDI CATATG 2 cut(s) 249, 318
Fnu4HI GCNGC 1 cut(s) 139
FriOI GRGCYC 1 cut(s) 13
Fsp4HI GCNGC 1 cut(s) 139
GluI GCNGC 1 cut(s) 139
HaeIII GGCC 3 cut(s) 11, 26, 315
Hin1II CATG 2 cut(s) 21, 303
HincII GTYRAC 1 cut(s) 124
HindII GTYRAC 1 cut(s) 124
Hpy166II GTNNAC 2 cut(s) 71, 124
Hpy188I TCNGA 1 cut(s) 47
Hpy8I GTNNAC 2 cut(s) 71, 124
HpyAV CCTTC 2 cut(s) 16, 336
HpyCH4III ACNGT 3 cut(s) 223, 236, 347
HpyCH4V TGCA 1 cut(s) 107
HpyF10VI GCNNNNNNNGC 1 cut(s) 86
Hsp92II CATG 2 cut(s) 21, 303
LpnPI CCDG 2 cut(s) 112, 139
Lsp1109I GCAGC 1 cut(s) 150
MaeIII GTNAC 1 cut(s) 165
MboII GAAGA 3 cut(s) 25, 56, 236
MhlI GDGCHC 1 cut(s) 13
MluCI AATT 2 cut(s) 158, 191
MseI TTAA 2 cut(s) 260, 270
MwoI GCNNNNNNNGC 1 cut(s) 86
NdeI CATATG 2 cut(s) 249, 318
NlaIII CATG 2 cut(s) 21, 303
NlaIV GGNNCC 1 cut(s) 11
PflMI CCANNNNNTGG 1 cut(s) 153
PkrI GCNGC 1 cut(s) 140
PsiI TTATAA 1 cut(s) 186
PspN4I GGNNCC 1 cut(s) 11
PspOMI GGGCCC 1 cut(s) 9
PspPI GGNCC 2 cut(s) 9, 10
RsaI GTAC 2 cut(s) 298, 344
RsaNI GTAC 2 cut(s) 297, 343
SaqAI TTAA 2 cut(s) 260, 270
SatI GCNGC 1 cut(s) 139
Sau96I GGNCC 2 cut(s) 9, 10
SduI GDGCHC 1 cut(s) 13
SetI ASST 2 cut(s) 131, 143
Sse9I AATT 2 cut(s) 158, 191
StyI CCWWGG 1 cut(s) 147
TaaI ACNGT 3 cut(s) 223, 236, 347
TasI AATT 2 cut(s) 158, 191
TatI WGTACW 2 cut(s) 296, 342
Tru1I TTAA 2 cut(s) 260, 270
Tru9I TTAA 2 cut(s) 260, 270
TseI GCWGC 1 cut(s) 138
TspDTI ATGAA 3 cut(s) 6, 121, 236
Van91I CCANNNNNTGG 1 cut(s) 153
XapI RAATTY 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.