Rh5BG291600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
37128917 .. 37134648
5732 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG291600.1

Sequence Viewer

Length: 321 bp
ATGAAAGAACAGAGGGTGATAACTAAAAGGATTGAGCATGTATTAGATGCCGAACTTTGTCATCATCTAGAGCTCAAAATAACTTTTAGATCACATCAGTTTATAAATACTGTAATTTTTTTTTTTCTGATGAAATTGATGAATGTTCAACAACGCAAAAATGACCACATCAATCTCTGTGATGTTAATCCCTTCAAATGTCAGAATCAAAGTGTGTGTGTGCAGACTGTGGAGGGAGAAGAAATTGAAAACCTGCATTGCATATTGGTTGATGAACAGGGAGCTTTGGACGGTGGTTTGGATATTCCACACAGTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

106

Amino Acids

12.34

Weight (kDa)

5.56

Isoelectric Point (pI)

43.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 104
Acc36I ACCTGC 1 cut(s) 261
AdeI CACNNNGTG 1 cut(s) 314
AgsI TTSAA 3 cut(s) 149, 196, 248
AluBI AGCT 2 cut(s) 73, 284
AluI AGCT 2 cut(s) 73, 284
Alw21I GWGCWC 1 cut(s) 75
AsuHPI GGTGA 1 cut(s) 28
BanII GRGCYC 1 cut(s) 75
Bbv12I GWGCWC 1 cut(s) 75
BfaI CTAG 1 cut(s) 68
BfuAI ACCTGC 1 cut(s) 261
BmsI GCATC 1 cut(s) 37
BsaBI GATNNNNATC 1 cut(s) 186
Bse3DI GCAATG 1 cut(s) 256
Bse8I GATNNNNATC 1 cut(s) 186
BseJI GATNNNNATC 1 cut(s) 186
BseMI GCAATG 1 cut(s) 256
BsgI GTGCAG 1 cut(s) 242
BsiHKAI GWGCWC 1 cut(s) 75
Bsp1286I GDGCHC 1 cut(s) 75
Bsp143I GATC 1 cut(s) 89
BspMI ACCTGC 1 cut(s) 261
BsrDI GCAATG 1 cut(s) 256
BssMI GATC 1 cut(s) 89
Bst4CI ACNGT 4 cut(s) 112, 229, 293, 314
BstKTI GATC 1 cut(s) 92
BstMBI GATC 1 cut(s) 89
BstNSI RCATGY 1 cut(s) 41
BtsIMutI CAGTG 1 cut(s) 319
BveI ACCTGC 1 cut(s) 261
CviAII CATG 1 cut(s) 38
CviJI RGCY 2 cut(s) 73, 284
CviKI_1 RGCY 2 cut(s) 73, 284
DpnI GATC 1 cut(s) 91
DpnII GATC 1 cut(s) 89
DraIII CACNNNGTG 1 cut(s) 314
Ecl136II GAGCTC 1 cut(s) 73
Eco24I GRGCYC 1 cut(s) 75
Eco53kI GAGCTC 1 cut(s) 73
EcoICRI GAGCTC 1 cut(s) 73
EcoT38I GRGCYC 1 cut(s) 75
FaeI CATG 1 cut(s) 41
FaiI YATR 3 cut(s) 39, 104, 263
FatI CATG 1 cut(s) 37
FriOI GRGCYC 1 cut(s) 75
FspBI CTAG 1 cut(s) 68
Hin1II CATG 1 cut(s) 41
HinfI GANTC 1 cut(s) 205
HphI GGTGA 1 cut(s) 28
Hpy188I TCNGA 2 cut(s) 129, 204
Hpy188III TCNNGA 1 cut(s) 68
HpyAV CCTTC 1 cut(s) 202
HpyCH4III ACNGT 4 cut(s) 112, 229, 293, 314
HpyCH4V TGCA 3 cut(s) 223, 256, 261
Hsp92II CATG 1 cut(s) 41
Kzo9I GATC 1 cut(s) 89
LmnI GCTCC 1 cut(s) 281
LpnPI CCDG 2 cut(s) 263, 266
LweI GCATC 1 cut(s) 37
MaeI CTAG 1 cut(s) 68
MalI GATC 1 cut(s) 91
MboI GATC 1 cut(s) 89
MboII GAAGA 1 cut(s) 251
MhlI GDGCHC 1 cut(s) 75
MluCI AATT 3 cut(s) 114, 134, 243
MnlI CCTC 2 cut(s) 6, 226
MseI TTAA 1 cut(s) 186
NdeII GATC 1 cut(s) 89
NlaIII CATG 1 cut(s) 41
NspI RCATGY 1 cut(s) 41
PfeI GAWTC 1 cut(s) 205
PsiI TTATAA 1 cut(s) 104
Psp124BI GAGCTC 1 cut(s) 75
SacI GAGCTC 1 cut(s) 75
SaqAI TTAA 1 cut(s) 186
Sau3AI GATC 1 cut(s) 89
SduI GDGCHC 1 cut(s) 75
SetI ASST 3 cut(s) 75, 255, 286
SfaNI GCATC 1 cut(s) 37
SgeI CNNG 4 cut(s) 50, 80, 265, 290
Sse9I AATT 3 cut(s) 114, 134, 243
SspMI CTAG 1 cut(s) 68
SstI GAGCTC 1 cut(s) 75
TaaI ACNGT 4 cut(s) 112, 229, 293, 314
TasI AATT 3 cut(s) 114, 134, 243
TfiI GAWTC 1 cut(s) 205
Tru1I TTAA 1 cut(s) 186
Tru9I TTAA 1 cut(s) 186
TscAI CASTG 1 cut(s) 319
TspDTI ATGAA 4 cut(s) 17, 146, 155, 288
TspRI CASTG 1 cut(s) 319
XbaI TCTAGA 1 cut(s) 67
XceI RCATGY 1 cut(s) 41
XspI CTAG 1 cut(s) 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.